Publications of Dirk Benndorf

Küchler, J., Opitz, P., Jordan, I., Genzel, Y., Benndorf, D., & Reichl, U.Quantification of intracellular influenza A virus proteins shows changes in dynamics related to host cell line and virus seedPresented at: 28th ESACT Meeting Edingburgh (Scotland), June 23, 2024.

Küchler, J., Opitz, P., Jordan, I., Genzel, Y., Benndorf, D., & Reichl, U.Quantification of intracellular influenza A virus proteins shows changes in dynamics related to host cell line and virus seedPresented at: Himmelfahrtstagung on Bioprocess Engineering 2024Regensburg (Germany), May 6, 2024.

Küchler, J., Opitz, P., Kupke, S. Y., Genzel, Y., Benndorf, D., & Reichl, U.Absolute quantification of viral proteins during single-round replication of vaccine producer cell linesPresented at: 32^nd Annual Meeting of the Society for Virology (GfV) Ulm (Germany), March 28, 2023.

Küchler, J., Opitz, P., Kupke, S. Y., Genzel, Y., Benndorf, D., & Reichl, U.Absolute quantification of influenza A virus proteins during single-round replication in vaccine producer cell linesPresented at: 16^th PEACe (Protein Expression in Animal Cells) ConferenceSitges (Spain), September 24, 2023.

Sultan Mohideen, M. A. H., Khesali Aghtaei, H., Reichl, U., & Benndorf, D.Development of a packed foam bed bioreactor for biological methanationPresented at: 6th International Conference on Monitoring and Control of Anaerobic Digestion ProcessesLeipzig, Germany, March 22, 2023.

Hellwig, P., Dittrich, A., Benndorf, D., & Reichl, U.Establishment of a click chemistry-based method for detection and characterizationof phage-host systems in anaerobic digestionPresented at: 2nd German Phage SymposiumStuttgart, Germany, May 23, 2022.

Hellwig, P., Heyer, R., Maus, I., Meinusch, N., Walke, D., Schlüter, A., Hassa, J., Sczyrba, A., Klocke, M., Mächtig, T., Schallert, K., Seick, I., Saake, G., Reichl, U., & Benndorf, D.Combined metagenomics and metaproteomics for analysis of the microbial community in a two-stage biogas plantPresented at: XIV Annual Congress of the European Proteomic AssociationLeipzig, Germany, April 3, 2022.

Khesali Aghtaei, H., Benndorf, D., & Reichl, U.Power to gas: Impact of changes in H₂ supply on performance and microbial community composition of a biological methanation processPresented at: Himmelfahrtstagung on Bioprocess Engineering 2022 - Future Bioprocesses for a Sustainable Industry (DECHEMA)Mainz, Germany, May 23, 2022.

Khesali Aghtaei, H., Benndorf, D., & Reichl, U.Development of a tubular foam bioreactor for biological methanationPresented at: 8th International Conference on Renewable Energy Gas Technology (REGATEC 2022)Malmö, Sweden, May 17, 2022.

Küchler, J., Püttker, S., Lahmann, P., Genzel, Y., Kupke, S. Y., Benndorf, D., & Reichl, U.Absolute quantification of viral proteins during single-round replication of MDCK suspension cellsPresented at: Proteomic Forum 2022Leipzig (Germany), April 3, 2022.

Theuerl, S., Klang, J., Hassa, J., Nelkner, J., Schlüter, A., Pühler, A., Heyer, R., & Benndorf, D.Biogas-Messprogramm III - SystemmikrobiologiePresented at: KTBL/FNR Biogaskongress: Biogas in der Landwirtschaft - Stand und PerspektivenLeipzig, Germany, October 9, 2019.

Benndorf, D., Heyer, R., Schallert, K., Püttker, S., Kohrs, F., Theuerl, S., Schlüter, A., & Reichl, U.Metaproteomics of biogas plants reveals that biogas producing microbial communities are shaped by syntrophy, competition and phage-host interactionsPresented at: International Society for Microbial Ecology Conference (ISME)Leipzig Germany, August 12, 2018.

Koch, S., Benndorf, D., Kohrs, F., Lahmann, P., Reichl, U., & Klamt, S.Strategies for Modeling of Large-Scale Metabolic Models of Microbial CommunitiesPresented at: Metabolic Pathway Analysis 2017Bozeman, Montana, USA, July 24, 2017.

Kohrs, F., Heyer, R., Bissinger, T., Kottler, R., Schallert, K., Püttker, S., Behne, A., Rapp, E., Benndorf, D., & Reichl, U.Proteotyping of microbial communities from laboratory-scale biogas plants reveals multiple steady-statesPresented at: 14th Symposium on Bacterial Genetics and Ecology (BAGECO 14)Aberdeen, Scotland, June 4, 2017.

Benndorf, D., Becher, B., Kohrs, F., Heyer, R., Rapp, E., Schlüter, A., & Sczyrba, A.An optimized bioinformatic workflow for of biogas plantsPresented at: VAAM JahrestagungJena, Germany, March 13, 2016.

Benndorf, D., Becher, B., Kohrs, F., Heyer, R., Rapp, E., Schlüter, A., Sczyrba, A., & Reichl, U.An optimized bioinformatic workflow for metaproteomics of biogas plantsPresented at: Annual Conference of the Association for General and Applied Microbiology (VAAM)Jena, Germany, March 13, 2016.

Benndorf, D., Heyer, R., Kohrs, F., Schallert, K., Muth, T., & Reichl, U.The MetaProteomeAnalyzer software provides a complete workflow for analysis of metaproteomic data in microbiome researchPresented at: International de.NBI-Symposium "Bioinformatics for Human Health & Disease"Heidelberg, Germany, November 7, 2016.

Heyer, R., Kohrs, F., Benndorf, D., De Vrieze , J., Rapp, E., Schlüter, A., Sczyrba, A., & Boon, N.A metaproteomic approach for analysis of microbial community structure and function for improvement of biogas plant performance.Presented at: Symposium on Advances and Applications in MetaproteomicsMagdeburg, Germany, February 8, 2016.

Koch, S., Benndorf, D., Reichl, U., & Klamt, S.New Methods for Modeling of Microbial Communities with Stoichiometric Metabolic ModelsPresented at: 6th International Conference on Foundations of Systems Biology in EngineeringMagdeburg, Germany, October 9, 2016.

Heyer, R., Kohrs, F., Benndorf, D., De Vrieze, J., Rapp, E., Boon, N., & Reichl, U.A metaproteomic approach for analysis of microbial community structure and function for improvement of biogas plant performancePresented at: 6th Congress of European Microbiologists (FEMS 2015)Maastricht, Netherlands, June 7, 2015.