Publications of Robert Heyer

Journal Article (15)

2022
Journal Article
Sydor, S., Dandyk, C., Schwerdt, J., Manka, P., Benndorf, D., Lehmann, T., Schallert, K., Wolf, M., Reichl, U., Canbay, A., Bechmann, L. P., & Heyer, R. (2022)Discovering Biomarkers for Non-Alcoholic Steatohepatitis Patients with and without Hepatocellular Carcinoma Using Fecal MetaproteomicsInternational Journal of Molecular Sciences, 23 (16), 8841doi: 10.3390/ijms23168841.
2019
Journal Article
Lehmann, T., Schallert, K., Vilchez-Vargas, R., Benndorf, D., Püttker, S., Sydor, S., Schulz, C. U., Bechmann, L. P., Canbay, A. E., Heidrich, B., Reichl, U., Link, A., & Heyer, R. (2019)Metaproteomics of fecal samples of Crohn's disease and Ulcerative ColitisJournal of Proteomics, 201, 93–103doi: 10.1016/j.jprot.2019.04.009.
Journal Article
Scoma, A., Heyer, R., Rifai, R., Dandyk, C., Marshall, I., Kerckhof, F.-M., Marietou, A., Boshker, H. T. S., Meysman, F. J. R., Malmos, K. G., Vosegaard, T., Vermeir, P., Banat, I. M., Benndorf, D., & Boon, N. (2019)Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communitiesThe ISME Journal, 13 (4), 1004–1018doi: 10.1038/s41396-018-0324-5.
Journal Article
Thorn, C. E., Bergesch , C., Joyce, A., Sambrano, G., McDonnell, K., Brennan, F., Heyer, R., Benndorf, D., & Abram, F. (2019)A robust, cost-effective method for DNA, RNA and protein co-extraction from soil, other complex microbiomes, and pure culturesMolecular Ecology Resources, 19 (2), 439–455doi: 10.1111/1755-0998.12979.
2018
Journal Article
Muth, T., Kohrs, F., Heyer, R., Benndorf, D., Rapp, E., Reichl, U., Martens, L., & Renard, B. Y. (2018)MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the GoAnalytical Chemistry, 90, 685–689doi: 10.1021/acs.analchem.7b03544.
Journal Article
Wenzel, L., Heyer, R., Schallert, K., Löser, L., Wünschiers, R., Reichl, U., & Benndorf, D. (2018)SDS-PAGE fractionation to increase metaproteomic insight into the taxonomic and functional composition of microbial communities for biogas plant samplesEngineering in Life Sciences, 18 (7), 498–509doi: 10.1002/elsc.201800062.
2017
Journal Article
Heyer, R., Schallert, K., Zoun, R., Becher, B., Saake, G., & Benndorf, D. (2017)Challenges and perspectives of metaproteomic data analysisJournal of Biotechnology, 261, 24–36doi: 10.1016/j.jbiotec.2017.06.1201.
Journal Article
Kohrs, F., Heyer, R., Bissinger, T., Kottler, R., Schallert, K., Püttker, S., Behne, A., Rapp, E., Benndorf, D., & Reichl, U. (2017)Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community compositionAnaerobe, 46, 56–68doi: 10.1016/j.anaerobe.2017.02.005.
2016
Journal Article
Heyer, R., Benndorf, D., Kohrs, F., De Vrieze, J., Boon, N., Hoffmann, M., Rapp, E., Schlüter, A., Sczyrba, A., & Reichl, U. (2016)Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor typeBiotechnology for Biofuels, 9 (9), 155doi: 10.1186/s13068-016-0572-4.
2015
Journal Article
Heyer, R., Kohrs, F., Reichl, U., & Benndorf, D. (2015)Metaproteomics of complex microbial communities in biogas plantsMicrobial Biotechnology, 8 (5), 749–763doi: 10.1111/1751-7915.12276.
Journal Article
Muth, T., Behne, A., Heyer, R., Kohrs, F., Benndorf, D., Hoffmann, M., Lehteva, M., Reichl, U., Martens, L., & Rapp, E. (2015)The MetaProteomeAnalyzer: A Powerful Open-Source Software Suite for Metaproteomics Data Analysis and InterpretationJournal of Proteome Research, 14 (3), 1557–1565doi: 10.1021/pr501246w.
2014
Journal Article
Kohrs, F., Heyer, R., Magnussen, A., Benndorf, D., Muth, T., Behne, A., Rapp, E., Kausmann, R., Heiermann, M., & Klocke, M. (2014)Sample prefractionation with liquid isoelectric focusing enables in depth microbial metaproteome analysis of mesophilic and thermophilic biogas plantsAnaerobe, 29, 59–67doi: 10.1016/j.anaerobe.2013.11.009.
2013
Journal Article
Hanreich, A., Schimpf, U., Zakrzewski, M., Schlüter, A., Benndorf, D., Heyer, R., Rapp, E., Puhler, A., Reichl, U., & Klocke, M. (2013)Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradationSystematic and Applied Microbiology, 36 (5), 330–338doi: 10.1016/j.syapm.2013.03.006.
Journal Article
Heyer, R., Kohrs, F., Benndorf, D., Rapp, E., Kausmann, R., Heiermann, M., Klocke, M., & Reichl, U. (2013)Metaproteome analysis of the microbial communities in agricultural biogas plantsNew biotechnology, 30 (6), 614–622doi: 10.1016/j.nbt.2013.01.002.
2012
Journal Article
Hanreich, A., Heyer, R., Benndorf, D., Rapp, E., Pioch, M., Reichl, U., & Klocke, M. (2012)Metaproteome analysis to determine the metabolically active part of thermophilic microbial community producing biogas from agricultural biomassCanadian Journal of Microbiology, 58 (7), 917–922doi: 10.1139/W2012-058.

Talk (13)

2019
Talk
Heyer, R., Schallert, K., Püttker, S., Kohrs, F., Hellwig, P., Theuerl, S., Schlüter, A., Reichl, U., & Benndorf, D.Identification of process parameters shaping microbial communities in biogas plants using large scale metaproteome analysisPresented at: Annual Conference of the Association for General and Applied Microbiology (VAAM)Mainz, Germany, March 17, 2019.
2016
Talk
Benndorf, D., Heyer, R., Schallert, K., Muth, T., Rapp, E., & Reichl, U.In-depth metaproteomics of a biogas plant operating at high ammonia nitrogen concentrationsPresented at: Biogas Science 2016Szeged, Hungary, August 21, 2016.
Talk
Benndorf, D., Kohrs, F., Heyer, R., Becher, B., Rapp, E., De Vrieze , J., Schlüter, A., Sczyrba, A., Boon, N., & Reichl, U.High-throughput metaproteomics of biogas plantsPresented at: Symposium on Advances and Applications in MetaproteomicsMagdeburg, Germany, February 8, 2016.
Talk
Heyer, R., Benndorf, D., Kohrs, F., De Vrieze, J., Boon, N., Hoffmann, M., Rapp, E., Schlüter, A., Sczyrba, A., & Reichl, U.Proteotyping of biogas plant microbiomesPresented at: Annual Conference of the Association for General and Applied Microbiology (VAAM)Jena, Germany, March 13, 2016.
Talk
Kohrs, F., Heyer, R., Benndorf, D., Bissinger, T., Kottler, R., Fronk, K., Rapp, E., & Reichl, U.Kultivierung und Metaproteomanalyse anaerober mikrobieller GemeinschaftenPresented at: 23. SIMBA-TreffenHavelberg, Germany, April 27, 2016.
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