Publications of Former Research Groups

Publications of Systems Biology (SBI)

Conference Paper (39)

  1. Conference Paper
    Kremling, A.; Ginkel, M.; Gilles, E. D.: Integrating Workbench for Modeling and Numerical Analysis of Cellular Systems. 8th International Conference on Computer Applications in Biotechnology, Quebec, Canada, June 24, 2001 - June 27, 2001. IFAC Proceedings Volumes 34 (5), pp. 85 - 90 (2001)
  2. Conference Paper
    Kremling, A.; Sauter, T.; Bullinger, E.; Ederer, M.; Allgöwer, F.; Gilles, E. D.: Biosystems Engineering: Applying methods from systems theory to biological systems. In: Proceedings of the Second International Conference on Systems Biology, pp. 282 - 290 (Eds. Yi, T.-M.; Hucka, M.; Morohashi, M.; Kitano, H.). International Conference on Systems Biology 2001, Pasadena, CA, U.S.A., November 04, 2001 - November 07, 2001. (2001)
  3. Conference Paper
    Schramm, H.; Grüner, S.; Kienle, A.; Gilles, E. D.: Control of Moving Bed Chromatographic Processes. In: Proceedings / European Control Conference ECC'01, pp. 2528 - 2533. European Control Conference, ECC'01, Porto, Portugal, September 04, 2001 - September 07, 2001. (2001)
  4. Conference Paper
    Stelling, J.; Gilles, E. D.: Robustness vs. identifiability of regulatory modules? The case of mitotic control in budding yeast cell cycle regulation. In: Proceedings of the Second International Conference on Systems Biology, pp. 181 - 190 (Ed. Yi, T.M.). International Conference on Systems Biology, Pasadena, USA, November 04, 2001 - November 07, 2001. (2001)
  5. Conference Paper
    Ginkel, M.; Kremling, A.; Tränkle, F.; Gilles, E. D.; Zeitz, M.: Application of the process modeling tool PROMOT to the modeling of metabolic networks. In: Proceedings / 3rd MATHMOD, IMACS Symposium on Mathematical Modelling, pp. 525 - 528 (Eds. Troch, I.; Breitenecker, F.). MATHMOD; 3 and IMACS Symposium on Mathematical Modelling; 3, Vienna, Austria, February 02, 2000 - February 04, 2000. (2000)
  6. Conference Paper
    Kremling, A.; Bettenbrock, K.; Gilles, E. D.: Control of Glucose and Lactose Uptake in E. coli. In: Proceedings of the 4th International Congress on Biochemical Engineering, pp. 304 - 308. International Congress on Biochemical Engineering, Stuttgart, Germany, February 17, 2000 - February 18, 2000. Fraunhofer IRB Verlag, Stuttgart (2000)
  7. Conference Paper
    Lengeler, J. W.; Gilles, E. D.; Jahreis, K.; Kremling, A.: Signal transduction systems and their coupling to regulatory networks. In: Proceedings of the 4th International Congress on Biochemical Engineering, pp. 309 - 313 (Ed. Brunner, H.). 4th International Congress on Biochemical Engineering, Stuttgart, February 17, 2000 - February 18, 2000. (2000)
  8. Conference Paper
    Mangold, M.; Klose, F.; Gilles, E. D.: Dynamic behavior of a counter-current fixed-bed reactor with sustained oscillations. In: European Symposium on Computer Aided Process Engineering - 10: ESCAPE - 10, pp. 205 - 210 (Ed. Pierucci, S.). European Symposium on Computer Aided Process Engineering - ESCAPE-10, Florence, Italy, May 07, 2000 - May 10, 2000. (2000)
  9. Conference Paper
    Schoeberl, B.; Wajant, H.; Scheurich, P.; Gilles, E. D.: Mathematical Modeling of TNF Receptor Interaction. In: Proceedings of the 4th International Congress on Biochemical Engineering, pp. 319 - 324. International Congress on Biochemical Engineering, Stuttgart, Germany, February 17, 2000 - February 18, 2000. Fraunhofer IRB Verlag, Stuttgart (2000)
  10. Conference Paper
    Stelling, J.; Gilles, E. D.: Modular Mathematical Modeling of Complex Regulatory Networks: Application to Cell Cycle Regulation in Saccharomyces Cerevisiae. In: Proceedings of the 4th International Congress on Biochemical Engineering, pp. 43 - 47. International Congress on Biochemical Engineering, Stuttgart, Germany, February 17, 2000 - February 18, 2000. IRB Fraunhofer Verlag, Stuttgart (2000)
  11. Conference Paper
    Kienle, A.; Pfisterer, F.; Waschler, R.; Sviatnyi, S.; Gilles, E. D.; Anoprienko, A.; Osipova, T.: Modeling and simulation of a chemical reactor for the production of acetic acid: II. Two-phase model. In: Informatics, Cybernetics and Computer Science (ICCS-98), pp. 15 - 23. ICCS-98, Donetsk, Ukraine. Donetsk State Technical University (1999)
  12. Conference Paper
    Waschler, R.; Kienle, A.; Sviatnyi, S.; Gilles, E. D.; Anoprienko, A.; Osipova, T.: Modeling and simulation of a chemical reactor for the production of acetic acid: III. dynamic phase transitions. In: Informatics, Cybernetics and Computer Science (ICCS-98), pp. 102 - 109. Donetsk State Technical University (1999)
  13. Conference Paper
    Stein, E.; Kienle, A.; Esparta, R.; Mohl, K. D.; Gilles, E. D.: Optimization of a reactor network for ethylene glycol synthesis. In: Preprints CHISA'98, p. Paper 108. Symposium on Non-Linar Dynamics in Chemical and Bioengineering Processes; CHISA'98, Praha, Czech Republic, August 23, 1998 - August 28, 1998. (1998)

Meeting Abstract (3)

  1. Meeting Abstract
    Joshi, M.; Kremling, A.; Seidel-Morgenstern, A.: Statistische Analyse von Adsorptionsgleichgewichten. In Chemie-Ingenieur-Technik, 78 (9), p. 1290. GVC/DECHEMA-Jahrestagungen 2006, Wiesbaden, Germany, September 26, 2006 - September 28, 2006. Wiley-VCH, Weinheim, Germany (2006)
  2. Meeting Abstract
    Zeyer, K. P.; Mangold, M.; Gilles, E. D.: Bifurcation Analysis and Safety Aspects in a Nonlinear Exothermic Reaction. In ACHEMA 2003: 27th International Exhibition-Congress on Chemical Engineering, Environmental Protection and Biotechnology, p. 107. ACHEMA 2003 : 27th International Exhibition-Congress on Chemical Engineering, Environmental Protection and Biotechnology, Frankfurt am Main, Germany, May 19, 2003 - May 24, 2003. (2003)
  3. Meeting Abstract
    Kienle, A.; Mangold, M.; Mohl, K.D.; Gilles, E. D.: Nonlinear computation using DIVA: methods and applications. In Preprints CHISA '98, p. Paper 312. Symposium on Non-Linear Dynamics in Chemical and Bioengineering Processes : CHISA'98, Praha, Czech Republic, August 23, 1998 - August 28, 1998. (1998)

Thesis - PhD (10)

  1. Thesis - PhD
    Backfisch, T.: Modellbasierte Untersuchung der Regulation des Stress-Sigmafaktors [Sigma]S in Escherichia coli. Dissertation, 134 pp., Shaker, Aachen (2011)
  2. Thesis - PhD
    Koschorreck, M.: Reduced Order Modeling and Analysis of Cellular Signal Transduction. Dissertation, 149 pp., Universität, Stuttgart (2009)
  3. Thesis - PhD
    Conzelmann, H.: Mathematical Modeling of Biochemical Signal Transduction Pathways in Mammalian Cells – A Domain-Oriented Approach to Reduce Combinatorial Complexity. Dissertation, 136 pp., Universität, Stuttgart (2008)
  4. Thesis - PhD
    Saez-Rodriguez, J.: Modular Analysis of Signal Transduction Networks. Dissertation, 193 pp., Otto-von-Guericke Universität, Magdeburg (2007)
 
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