Publications of Former Research Groups

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Journal Article (6)

  1. Journal Article
    Schlatter, R.; Conzelmann, H.; Gilles, E. D.; Sawodny, O.; Sauter, T.: Analysis of an apoptotic core model focused on experimental design using artificial data. IET Systems Biology 3 (4), pp. 255 - 265 (2009)
  2. Journal Article
    Bettenbrock, K.; Sauter, T.; Jahreis, K.; Kremling, A.; Lengeler, J. W.; Gilles, E. D.: Correlation between growth rates, EIIACrr phosphorylation, and intracellular cAMP levels in Escherichia coli K-12. Journal of Bacteriology 189 (19), pp. 6891 - 6900 (2007)
  3. Journal Article
    Bettenbrock, K.; Fischer, S.; Kremling, A.; Jahreis, K.; Sauter, T.; Gilles, E. D.: A quantitative approach to catabolite repression in Escherichia coli. Journal of Biological Chemistry 281, pp. 2578 - 2584 (2006)
  4. Journal Article
    Kremling, A.; Kremling, S.; Gadkar, K.; Doyle, F. J.; Sauter, T.; Bullinger, E.; Allgoewer, F.; Gilles, E. D.: A benchmark for methods in reverse engineering and model discrimination: problem formulation and solutions. Genome Research 14 (9), pp. 1773 - 1785 (2004)
  5. Journal Article
    Kremling, A.; Kremling, S.; Sauter, T.; Bettenbrock, K.; Gilles, E. D.: Time hierarchies in the Escherichia coli carbohydrate uptake and metabolism. Biosystems 73 (1), pp. 57 - 71 (2004)
  6. Journal Article
    Ederer, M.; Sauter, T.; Bullinger, E.; Gilles, E. D.; Allgöwer, F.: An approach for dividing models of biological reaction networks into functional units. Simulation: Transactions of the Society for Modeling and Simulation 79 (12), pp. 703 - 716 (2003)

Conference Paper (4)

  1. Conference Paper
    Saez-Rodriguez, J.; Conzelmann, H.; Sauter, T.; Kholodenko, B. N.; Gilles, E. D.: Domain-oriented and modular approaches to the reduction of mathematical models of signaling networks. In: 4th Workshop on Computation of Biochemical Pathways and Genetic Networks: a BioSim Event, pp. 13 - 20 (Eds. Kummer, U.; Pahle, J.; Surovtsova, I.; Zobeley, J.). 4th Workshop on Computation of Biochemical Pathways and Genetic Networks, Heidelberg, Germany, September 12, 2005 - September 13, 2005. (2005)
  2. Conference Paper
    Kremling, A.; Bettenbrock, K.; Fischer, S.; Ginkel, M.; Sauter, T.; Gilles, E. D.: Towards whole cell in silico models for cellular systems: model set-up and model validation. In: Positive systems: proceedings of the First Multidisciplinary International Symposium on Positive Systems (POST 2003), pp. 92 - 102 (Eds. Benvenuti, L.; de Santis, A.; Farina, L.). First Multidisciplinary International Symposium on Positive Systems (POST 2003), Rome, Italy, August 28, 2003 - August 30, 2003. (2003)
  3. Conference Paper
    Sauter, T.; Kremling, A.; Bettenbrock, K.; Fischer, S.; Gilles, E. D.: Analysis of the dynamics of the Escherichia coli glucose PTS in different time windows. In: Abstracting and synthesizing the principles of living systems: Fifth German Workshop on Artificial Life, pp. 33 - 42 (Eds. Polani, D.; Kim, J.; Martinetz, T.). Fifth German Workshop on Artificial Life, Luebeck, Germany, March 18, 2002 - March 20, 2002. (2002)
  4. Conference Paper
    Kremling, A.; Sauter, T.; Bullinger, E.; Ederer, M.; Allgöwer, F.; Gilles, E. D.: Biosystems Engineering: Applying methods from systems theory to biological systems. In: Proceedings of the Second International Conference on Systems Biology, pp. 282 - 290 (Eds. Yi, T.-M.; Hucka, M.; Morohashi, M.; Kitano, H.). International Conference on Systems Biology 2001, Pasadena, CA, U.S.A., November 04, 2001 - November 07, 2001. (2001)

Talk (2)

  1. Talk
    Ederer, M.; Sauter, T.; Bettenbrock, K.; Sawodny, O.; Gilles, E. D.: Thermodynamically-Consistent Reduced-Order Modeling of the Oxygen Response of Escherichia coli. 9th International Conference on Systems Biology (ICSB 2008), Göteborg, Sweden (2008)
  2. Talk
    Saez-Rodriguez, J.; Conzelmann, H.; Sauter, T.; Kholodenko, B. N.; Gilles, E. D.: Domain-oriented and modular approaches to the reduction of mathematical models of signaling networks. 4th Workshop on Computation of Biochemical Pathways and Genetic Networks and Genetic Networks, Heidelberg, Germany (2005)

Poster (2)

  1. Poster
    Conzelmann, H.; Saez-Rodriguez, J.; Sauter, T.; Kholodenko, B. N.; Gilles, E. D.: A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks. 1st FEBS Advanced Course on Systems Biology, Gosau, Austria (2005)
  2. Poster
    Conzelmann, H.; Saez-Rodriguez, J.; Sauter, T.; Bullinger, F.; Allgöwer, F.; Gilles, E. D.: Domain oriented modeling and model reduction. 5th International Conference on Systems Biology, Heidelberg, Germany (2004)

Thesis - PhD (1)

  1. Thesis - PhD
    Sauter, T.: Die bakterielle Signalverarbeitung am Beispiel des Sucrose Phosphotransferasesystems in Escherichia coli: Modellierung und experimentelle Überprüfung. Dissertation, 156 pp., Universität, Stuttgart (2003)
 
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