Publications of Former Research Groups

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Journal Article (13)

  1. Journal Article
    Anders, A.; Lilie, H.; Franke, K.; Kapp, L.; Stelling, J.; Gilles, E. D.; Breunig, K. D.: The galactose switch in Kluyveromyces lactis depends on nuclear competition between Gal4 and Gal1 for Gal80 binding. The Journal of Biological Chemistry 281 (39), pp. 29337 - 29348 (2006)
  2. Journal Article
    Zak, D. E.; Stelling, J.; Doyle, F. J.: Sensitivity analysis of oscillatory (bio)chemical systems. Computers and Chemical Engineering 29, pp. 663 - 673 (2005)
  3. Journal Article
    Papin, J. A.; Stelling, J.; Price, N. D.; Klamt, S.; Schuster, S.; Palsson, B. O.: Comparison of network-based pathway analysis methods. Trends in Biotechnology 22 (8), pp. 400 - 405 (2004)
  4. Journal Article
    Stelling, J.; Gilles, E. D.: Mathematical Modeling of Complex Regulatory Networks. IEEE Transactions on Nanobioscience 3 (3), pp. 172 - 179 (2004)
  5. Journal Article
    Stelling, J.; Gilles, E. D.; Doyle III, F. J.: Robustness properties of circadian clock architectures. Proceedings of the National Academy of Sciences U.S.A. 101 (36), pp. 13210 - 13215 (2004)
  6. Journal Article
    Stelling, J.; Sauer, U.; Szallasi, Z.; Doyle III, F. J.; Doyle, J.: Robustness of Cellular Functions. Cell 118 (6), pp. 675 - 685 (2004)
  7. Journal Article
    Stelling, J.: Mathematical models in microbial systems biology. Current Opinion in Microbiology 7 (5), pp. 513 - 518 (2004)
  8. Journal Article
    Hucka, M.; Finney, A.; Sauro, H. M.; Bolouri, H.; Doyle, J. C.; Kitano, H.; Arkin, A. P.; Bornstein, B. J.; Bray, D.; Cornish-Bowden, A. et al.; Cuellar, A. A.; Dronov, S.; Gilles, E. D.; Ginkel, M.; Gor, V.; Goryanin, I. I.; Hedley, W. J.; Hodgman, T. C.; Hofmeyr, J. H.; Hunter, P. J.; Juty, N. S.; Kasberger, J. L.; Kremling, A.; Kummer, U.; Le Novere, N.; Loew, L. M.; Lucio, D.; Mendes, P.; Minch, E.; Mjolsness, E. D.; Nakayama, Y.; Nelson, M. R.; Nielsen, P. F.; Sakurada, T.; Schaff, J. C.; Shapiro, B. E.; Shimizu, T. S.; Spence, H. D.; Stelling, J.; Takahashi, K.; Tomita, M.; Wagner, J.; Wang, J.: The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics 19 (4), pp. 524 - 531 (2003)
  9. Journal Article
    Klamt, S.; Stelling, J.: Two approaches for metabolic pathway analysis? Trends in Biotechnology 21 (2), pp. 64 - 69 (2003)
  10. Journal Article
    Klamt, S.; Stelling, J.; Ginkel, M.; Gilles, E. D.: FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps. Bioinformatics 19 (2), pp. 261 - 269 (2003)
  11. Journal Article
    Klamt, S.; Stelling, J.: Combinatorial complexity of pathway analysis in metabolic networks. Molecular Biology Reports 29 (1-2), pp. 233 - 236 (2002)
  12. Journal Article
    Stelling, J.; Klamt, S.; Bettenbrock, K.; Schuster, S.; Gilles, E. D.: Metabolic network structure determines key aspects of functionality and regulation. Nature 420 (6912), pp. 190 - 193 (2002)
  13. Journal Article
    Kremling, A.; Bettenbrock, K.; Stelling, J.; Reichl, U.; Gilles, E. D.: Systemorientierte Bioprozesstechnik: interdisziplinäre Forschung in Biologie, System- und Computerwissenschaften. Magdeburger Wissenschaftsjournal 6 (1/2), pp. 29 - 36 (2001)

Book Chapter (1)

  1. Book Chapter
    Stelling, J.; Kremling, A.; Ginkel, M.; Bettenbrock, K.; Gilles, E. D.: Towards a Virtual Biological Laboratory. In: Foundations of systems biology, pp. 189 - 212 (Ed. Kitano, H.). MIT Press, Cambridge/Massachusetts (2001)

Conference Paper (3)

  1. Conference Paper
    Conradi, C.; Stelling, J.; Raisch, J.: Structure discrimination of continuous models for biochemical reaction networks via finite state machines. In: Proceedings of the 2001 IEEE International Symposium on Intelligent Control ISIC'01, pp. 138 - 143. (2001)
  2. Conference Paper
    Stelling, J.; Gilles, E. D.: Robustness vs. identifiability of regulatory modules? The case of mitotic control in budding yeast cell cycle regulation. In: Proceedings of the Second International Conference on Systems Biology, pp. 181 - 190 (Ed. Yi, T.M.). International Conference on Systems Biology, Pasadena, USA, November 04, 2001 - November 07, 2001. (2001)
  3. Conference Paper
    Stelling, J.; Gilles, E. D.: Modular Mathematical Modeling of Complex Regulatory Networks: Application to Cell Cycle Regulation in Saccharomyces Cerevisiae. In: Proceedings of the 4th International Congress on Biochemical Engineering, pp. 43 - 47. International Congress on Biochemical Engineering, Stuttgart, Germany, February 17, 2000 - February 18, 2000. IRB Fraunhofer Verlag, Stuttgart (2000)

Thesis - PhD (1)

  1. Thesis - PhD
    Stelling, J.: Systems analysis of robustness in cellular networks. Dissertation, 190 pp., Shaker, Aachen (2004)
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