Publications of Former Research Groups

Publications of Systems Biology (SBI)

Journal Article (9)

  1. 2003
    Journal Article
    Ederer, M.; Sauter, T.; Bullinger, E.; Gilles, E. D.; Allgöwer, F.: An approach for dividing models of biological reaction networks into functional units. Simulation: Transactions of the Society for Modeling and Simulation 79 (12), pp. 703 - 716 (2003)
  2. Journal Article
    Ginkel, M.; Kremling, A.; Nutsch, T.; Rehner, R.; Gilles, E. D.: Modular modeling of cellular systems with ProMoT/Diva. Bioinformatics 19, pp. 1169 - 1176 (2003)
  3. Journal Article
    Grammel, H.; Gilles, E. D.; Ghosh, R.: Microaerophilic cooperation of reductive and oxidative pathways allows maximal photosynthetic membrane biosynthesis in Rhodospirillum rubrum. Applied and Environmental Microbiology 69 (11), pp. 6577 - 6586 (2003)
  4. Journal Article
    Grüner, S.; Mohl, K. D.; Kienle, A.; Gilles, E. D.; Fernholz, G.; Friedrich, M.: Nonlinear control of a reactive distillation column. Control Engineering Practice 11 (8), pp. 915 - 925 (2003)
  5. Journal Article
    Hucka, M.; Finney, A.; Sauro, H. M.; Bolouri, H.; Doyle, J. C.; Kitano, H.; Arkin, A. P.; Bornstein, B. J.; Bray, D.; Cornish-Bowden, A. et al.; Cuellar, A. A.; Dronov, S.; Gilles, E. D.; Ginkel, M.; Gor, V.; Goryanin, I. I.; Hedley, W. J.; Hodgman, T. C.; Hofmeyr, J. H.; Hunter, P. J.; Juty, N. S.; Kasberger, J. L.; Kremling, A.; Kummer, U.; Le Novere, N.; Loew, L. M.; Lucio, D.; Mendes, P.; Minch, E.; Mjolsness, E. D.; Nakayama, Y.; Nelson, M. R.; Nielsen, P. F.; Sakurada, T.; Schaff, J. C.; Shapiro, B. E.; Shimizu, T. S.; Spence, H. D.; Stelling, J.; Takahashi, K.; Tomita, M.; Wagner, J.; Wang, J.: The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics 19 (4), pp. 524 - 531 (2003)
  6. Journal Article
    Klamt, S.; Stelling, J.: Two approaches for metabolic pathway analysis? Trends in Biotechnology 21 (2), pp. 64 - 69 (2003)
  7. Journal Article
    Klamt, S.; Stelling, J.; Ginkel, M.; Gilles, E. D.: FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps. Bioinformatics 19 (2), pp. 261 - 269 (2003)
  8. Journal Article
    Motz, S.; Mitrovic, A.; Gilles, E. D.; Vollmer, U.; Raisch, J.: Modeling, simulation and stabilizing H-control of an oscillating continuous crystallizer with fines dissolution. Chemical Engineering Science 58 (15), pp. 3473 - 3488 (2003)
  9. Journal Article
    Nutsch, T.; Marwan, W.; Oesterhelt, D.; Gilles, E. D.: Signal processing and flagellar motor switching during phototaxis of Halobacterium salinarum. Genome Research 13 (11), pp. 2406 - 2412 (2003)

Conference Paper (6)

  1. 2003
    Conference Paper
    Chebotarov, M.; Ginkel, M.; Häfele, M.; Mangold, M.; Gilles, E. D.; Kienle, A.; Svjatnyj, V.: DIVAGUI: the graphical user interface for the simulation environment DIVA. In: Simulationstechnik: 17. Symposium in Magdeburg, pp. 155 - 160 (Ed. Hohmann, R.). ASIM 2003 : 17. Symposium Simulationstechnik, Magdeburg, Germany, May 16, 2003 - May 19, 2003. (2003)
  2. Conference Paper
    Kremling, A.; Bettenbrock, K.; Fischer, S.; Ginkel, M.; Sauter, T.; Gilles, E. D.: Towards whole cell in silico models for cellular systems: model set-up and model validation. In: Positive systems: proceedings of the First Multidisciplinary International Symposium on Positive Systems (POST 2003), pp. 92 - 102 (Eds. Benvenuti, L.; de Santis, A.; Farina, L.). First Multidisciplinary International Symposium on Positive Systems (POST 2003), Rome, Italy, August 28, 2003 - August 30, 2003. (2003)
  3. Conference Paper
    Mangold, M.; Ginkel, M.; Gilles, E. D.: Entwicklung einer Bibliothek dynamischer Membranreaktormodelle mit Hilfe des Modellierungswerkzeugs ProMoT. In: Simulationstechnik: 17. Symposium in Magdeburg, pp. 161 - 166 (Ed. Hohmann, R.). ASIM 2003 - 17. Symposium Simulationstechnik, Magdeburg, Germany, September 16, 2003 - September 19, 2003. (2003)
  4. Conference Paper
    Mangold, M.; Ginkel, M.; Gilles, E. D.: A dynamic model library for membrane reactors. In: ECCE - 4th European Congress of Chemical Engineering, p. P-6.1-033. ECCE - 4th European Congress of Chemical Engineering, Granada, Spain, September 21, 2003 - September 25, 2003. (2003)
  5. Conference Paper
    Waschler, R.; Angeles-Palacios, O.; Ginkel, M.; Kienle, A.: Flexible Modellierung grosschemischer Anlagen mit dem Modellierungswerkzeug ProMoT. In: Simulationstechnik: 17. Symposium in Magdeburg, pp. 173 - 178 (Ed. Hohmann, R.). 17. Symposium Simulationstechnik : ASIM 2003, Magdeburg, Germany, May 16, 2003 - May 19, 2003. (2003)
  6. Conference Paper
    Waschler, R.; Angeles-Palacios, O.; Ginkel, M.; Kienle, A.: Application of the Process Modeling Tool ProMoT to large-scale chemical engineering processes. In: Proceedings / 4rd MATHMOD, pp. 1113 - 1121. 4th IMACS Symposium on Mathematical Modelling, Vienna, Austria, February 05, 2003 - February 07, 2003. (2003)

Meeting Abstract (1)

  1. 2003
    Meeting Abstract
    Zeyer, K. P.; Mangold, M.; Gilles, E. D.: Bifurcation Analysis and Safety Aspects in a Nonlinear Exothermic Reaction. In: ACHEMA 2003: 27th International Exhibition-Congress on Chemical Engineering, Environmental Protection and Biotechnology, p. 107. ACHEMA 2003 : 27th International Exhibition-Congress on Chemical Engineering, Environmental Protection and Biotechnology, Frankfurt am Main, Germany, May 19, 2003 - May 24, 2003. (2003)

Thesis - PhD (2)

  1. 2003
    Thesis - PhD
    Sauter, T.: Die bakterielle Signalverarbeitung am Beispiel des Sucrose Phosphotransferasesystems in Escherichia coli: Modellierung und experimentelle Überprüfung. Dissertation, 156 pp., Universität, Stuttgart (2003)
  2. Thesis - PhD
    Schoeberl, B.: Mathematical modeling of signal transduction pathways in mammalian cells at the example of the EGF induced MAP kinase cascade and TNF receptor crosstalk. Dissertation, 200 pp., Shaker, Aachen (2003)
 
loading content
Go to Editor View