Publications of Philipp Schneider

Schulz-Mirbach, H., Krüsemann, J. L., Andreadaki, T., Nerlich, J. N., Mavrothalassiti, E., Boecker, S., Schneider, P., Weresow, M., Abdelwahab, O., Paczia, N., Dronsella, B., Erb, T. J., Bar-Even, A., Klamt, S., & Lindner, S. N. (2024)Engineering new-to-nature biochemical conversions by combining fermentative metabolism with respiratory modulesNature Communications, 15 (1), 6725 doi: 10.1038/s41467-024-51029-x.

Schneider, P., Bekiaris, P. S., Kamp von, A., & Klamt, S. (2022)StrainDesign: a Comprehensive Python Package for Computational Design of Metabolic NetworksBioinformatics, 38 (21), 4981–4983doi: 10.1093/bioinformatics/btac632.

Thiele, S., Kamp von, A., Bekiaris, P. S., Schneider, P., & Klamt, S. (2022)CNApy: a CellNetAnalyzer GUI in Python for Analyzing and Designing Metabolic NetworksBioinformatics, 38 (5), 1467–1469doi: 10.1093/bioinformatics/btab828 .

Schneider, P., Radhakrishnan, M., & Klamt, S. (2021)Systematizing the different notions of growth-coupled product synthesis and a single framework for computing corresponding strain designsBiotechnology Journal, 16, 2100236doi: 10.1002/biot.202100236.

Schneider, P., Kamp von, A., & Klamt, S. (2020)An extended and generalized framework for the calculation of metabolic intervention strategies based on minimal cut setsPLoS Computational Biology, 16 (7), e1008110doi: 10.1371/journal.pcbi.1008110.

Schneider, P. & Klamt, S. (2019)Characterizing and Ranking Computed Metabolic Engineering StrategiesBioinformatics, 35 (17), 3063–3072doi: 10.1093/bioinformatics/bty1065.

Schneider, P. (2021)Advances in Computational Strain Design with Minimal Cut SetsPhD Thesis, Shaker Verlagdoi: 10.2370/9783844084115.