Publications of Steffen Klamt

Conference Paper (10)

2016
Conference Paper
Hädicke, O., Pozzi, R., Witt, A., Oldiges, M., Klamt, S., & Grammel, H. (2016)Systembiologische Untersuchung bakterieller Stoffwechselnetzwerke und Enzyme für die technische Verwertung von COIn: Technische Systeme für die Lebenswissenschaften, 115–122.
2013
Conference Paper
Ryll, A., Bucher, J., Niklas , J., & Klamt, S. (2013)A fusion approach linking signaling logic and metabolic mass-flow kinetics in hepatocytesIn: Computational Methods in Systems Biology: 11th International Conference, CMSB 2013, 255–256.
2010
Conference Paper
Bohl, K., Figueiredo, L. F., Hädicke, O., Klamt, S., Kost, C., Schuster, S., & Kaleta, C. (2010)CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networksIn: German Conference on Bioinformatics 2010, 71–80.
2001
Conference Paper
Klamt, S., Kremling, A., & Gilles, E. D. (2001)FluxAnalyzer: a graphical user interface for stoichiometric and quantitative analysis of metabolic networksIn: IFAC Proceedings Volumes, 119–124doi: 10.1016/S1474-6670(17)34206-4.

Talk (10)

2023
Talk
Alcalá Orozco, E. A., Huber, N., Klamt, S., Rexer, T., & Reichl, U.Development of a cell-free enzymatic cascade for the synthesis of GDP-fucose - modeling and optimizationPresented at: GlycoBioTec Symposium 2023Berlin, Germany, January 16, 2023.
Talk
Alcalá Orozco, E. A., Huber, N., Klamt, S., Rexer, T., & Reichl, U.A cell-free enzymatic cascade for the synthesis of GDP-fucose - modeling and optimizationPresented at: 3rd Japan-Switzerland-Germany Workshop on Biocatalysis and Bioprocess Development Aichi (Japan), September 10, 2023.
Talk
Espinel-Rios, S., Bettenbrock, K., Klamt, S., Avalos, J. L., & Findeisen, R.Machine learning-supported cybergenetic modeling, optimization and control for synthetic microbial communitiesPresented at: 33rd European Symposium on Computer-Aided Process Engineering (ESCAPE-33)Athens, Greece, June 18, 2023.
Talk
Espinel-Rios, S., Slaviero, G., Bettenbrock, K., Klamt, S., & Findeisen, R.Monitoring intracellular metabolite concentrations by moving horizon estimation based on kinetic modelingPresented at: IFAC World Congress 2023Yokohama, Japan, July 9, 2023.
2022
Talk
Espinel-Rios, S., Morabito , B., Pohlodek, J., Bettenbrock, K., Klamt, S., & Findeisen, R.Optimal control and dynamic modulation of the ATPase gene expression for enforced ATP wasting in batch fermentationsPresented at: 13th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, DYCOPS 2022Busan, Korea, June 14, 2022.
Talk
Huber, N., Alcalá Orozco, E. A., Rexer, T., Reichl, U., & Klamt, S.Dynamic Modeling and Optimization of a Cell-free Enzymatic Cascade for the Production of GDP-FucosePresented at: ISGSB2022 ConferenceInnsbruck, Austria, September 19, 2022.
2017
Talk
Harder, B.-J., Bettenbrock, K., & Klamt, S.Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid productionPresented at: Himmelfahrtstagung "Models for Developing and Optimising Biotech Production"Neu-Ulm, Germany, May 22, 2017.
Talk
Harder, B.-J., Bettenbrock, K., & Klamt, S.Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid productionPresented at: Systems Biology meets Synthetic BiologyFrankfurt am Main, Germany, May 2, 2017.
2016
Talk
Harder, B.-J., Bettenbrock, K., & Klamt, S.Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid productionPresented at: Annual Conference 2016 of the Association for General and Applied Microbiology (VAAM)Jena, Germany, March 13, 2016.
Talk
Koch, S., Benndorf, D., Reichl, U., & Klamt, S.Predicting compositions of microbial communities from stoichiometric models with applications for the biogas processPresented at: Annual Conference 2016 of the Association for General and Applied Microbiology (VAAM)Jena, Germany, March 13, 2016.

Poster (9)

2023
Poster
Bauer, J., Boecker, S., & Klamt, S.A toolbox for designing optimal multi-stage processesPresented at: Metabolic Pathway AnalysisSeoul, Korea, July 24, 2023.
2022
Poster
Huber, N., Alcalá Orozco, E. A., Rexer, T., Reichl, U., & Klamt, S.Dynamic Modeling and Optimization of a Cell-free Enzymatic Cascade for the Production of GDP-FucosePresented at: ISGSB2022 ConferenceInnsbruck, Austria, September 19, 2022.
Poster
Huber, N., Alcalá Orozco, E. A., Rexer, T., Reichl, U., & Klamt, S.Dynamic Modeling and Optimization of a Cell-free Enzymatic Cascade for the Production of GDP-FucosePresented at: Metabolic Pathway AnalysisSeoul, Korea, July 24, 2023.
2017
Poster
Koch, S., Benndorf, D., Kohrs, F., Lahmann, P., Reichl, U., & Klamt, S.Strategies for Modeling of Large-Scale Metabolic Models of Microbial CommunitiesPresented at: Metabolic Pathway Analysis 2017Bozeman, Montana, USA, July 24, 2017.
2016
Poster
Harder, B.-J., Bettenbrock, K., & Klamt, S.Model-Based Metabolic Engineering of Escherichia coli for High Yield Itaconic Acid ProductionPresented at: Metabolic Engineering 11Kobe, Japan, June 26, 2016.
Poster
Harder, B.-J., Bettenbrock, K., & Klamt, S.Model-Based Metabolic Engineering of Escherichia Coli for High Yield Itaconic Acid ProductionPresented at: 6th International Conference on Foundations of Systems Biology in EngineeringMagdeburg, Germany, October 9, 2016.
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