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Journal Article (10)

2019
Journal Article
Heyer, R.; Schallert, K.; Siewert, C.; Kohrs, F.; Greve, J.; Maus, I.; Klang, J.; Klocke, M.; Heiermann, M.; Hoffmann, M. et al.; Püttker, S.; Calusinska, M.; Zoun, R.; Saake, G.; Benndorf, D.; Reichl, U.; Reichl, U.: Metaproteome analysis reveals that syntrophy, competition, and phage-host interaction shape microbial communities in biogas plants. Microbiome (7), 69 (2019)
Journal Article
Koch, S.; Kohrs, F.; Lahmann, P.; Bissinger, T.; Wendschuh, S.; Benndorf, D.; Reichl, U.; Klamt, S.: RedCom: A strategy for reduced metabolic modeling of complex microbial communities and its application for analyzing experimental datasets from anaerobic digestion. PLoS Computational Biology 15 (2), e1006759 (2019)
2018
Journal Article
Muth, T.; Kohrs, F.; Heyer, R.; Benndorf, D.; Rapp, E.; Reichl, U.; Martens, L.; Renard, B. Y.: MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the Go. Analytical Chemistry 90, pp. 685 - 689 (2018)
2017
Journal Article
Kohrs, F.; Heyer, R.; Bissinger, T.; Kottler, R.; Schallert, K.; Püttker, S.; Behne, A.; Rapp, E.; Benndorf, D.; Reichl, U.: Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community composition. Anaerobe 46, pp. 56 - 68 (2017)
2016
Journal Article
Heyer, R.; Benndorf, D.; Kohrs, F.; De Vrieze, J.; Boon, N.; Hoffmann, M.; Rapp, E.; Schlüter, A.; Sczyrba, A.; Reichl, U.: Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type. Biotechnology for Biofuels 9 (9), 155 (2016)
2015
Journal Article
Heyer, R.; Kohrs, F.; Reichl, U.; Benndorf, D.: Metaproteomics of complex microbial communities in biogas plants. Microbial Biotechnology 8 (5), pp. 749 - 763 (2015)
Journal Article
Muth, T.; Behne, A.; Heyer, R.; Kohrs, F.; Benndorf, D.; Hoffmann, M.; Lehteva, M.; Reichl, U.; Martens, L.; Rapp, E.: The MetaProteomeAnalyzer: A Powerful Open-Source Software Suite for Metaproteomics Data Analysis and Interpretation. Journal of Proteome Research 14 (3), pp. 1557 - 1565 (2015)
Journal Article
Theuerl, S.; Kohrs, F.; Benndorf, D.; Maus, I.; Wibberg, D.; Schlüter, A.; Kausmann, R.; Heiermann, M.; Rapp, E.; Reichl, U. et al.; Pühler, A.; Klocke, M.: Community shifts in a well-operating agricultural biogas plant: how process variations are handled by the microbiome. Applied Microbiology and Biotechnology 99 (18), pp. 7791 - 7803 (2015)
2014
Journal Article
Kohrs, F.; Heyer, R.; Magnussen, A.; Benndorf, D.; Muth, T.; Behne, A.; Rapp, E.; Kausmann, R.; Heiermann, M.; Klocke, M.: Sample prefractionation with liquid isoelectric focusing enables in depth microbial metaproteome analysis of mesophilic and thermophilic biogas plants. Anaerobe 29, pp. 59 - 67 (2014)
2013
Journal Article
Heyer, R.; Kohrs, F.; Benndorf, D.; Rapp, E.; Kausmann, R.; Heiermann, M.; Klocke, M.; Reichl, U.: Metaproteome analysis of the microbial communities in agricultural biogas plants. New biotechnology 30 (6), pp. 614 - 622 (2013)

Talk (12)

2019
Talk
Heyer, R.; Schallert, K.; Püttker, S.; Kohrs, F.; Hellwig, P.; Theuerl, S.; Schlüter, A.; Reichl, U.; Benndorf, D.: Identification of process parameters shaping microbial communities in biogas plants using large scale metaproteome analysis. Annual Conference of the Association for General and Applied Microbiology (VAAM), Mainz, Germany (2019)
2016
Talk
Benndorf, D.; Kohrs, F.; Heyer, R.; Becher, B.; Rapp, E.; De Vrieze , J.; Schlüter, A.; Sczyrba, A.; Boon, N.; Reichl, U.: High-throughput metaproteomics of biogas plants. Symposium on Advances and Applications in Metaproteomics, Magdeburg, Germany (2016)
Talk
Heyer, R.; Benndorf, D.; Kohrs, F.; De Vrieze, J.; Boon, N.; Hoffmann, M.; Rapp, E.; Schlüter, A.; Sczyrba, A.; Reichl, U.: Proteotyping of biogas plant microbiomes. Annual Conference of the Association for General and Applied Microbiology (VAAM), Jena, Germany (2016)
Talk
Kohrs, F.; Heyer, R.; Benndorf, D.; Bissinger, T.; Kottler, R.; Fronk, K.; Rapp, E.; Reichl, U.: Kultivierung und Metaproteomanalyse anaerober mikrobieller Gemeinschaften. 23. SIMBA-Treffen, Havelberg, Germany (2016)
2015
Talk
Benndorf, D.; Kohrs, F.; Heyer, R.; Rapp, E.; De Vrieze, J.; Boon, N.; Schlüter, A.; Sczyrba, A.; Reichl, U.: An optimized workflow for high-throughput metaproteomics of biogas plants. 9th International Symposium on Anaerobic Microbiology, Portorož, Slovenia (2015)
2014
Talk
Bensmann, B.; Hanke-Rauschenbach, R.; Heyer, R.; Kohrs, F.; Benndorf, D.; Sundmacher, K.: Methanation of renewable hydrogen within biogas reactors? A process systems engineering approac. CHISA 2014, Prague, Czech Republic (2014)
Talk
Heyer, R.; Kohrs, F.; Benndorf, D.; Rapp, E.; Reichl, U.: Analysing the microbial population structure and metabolic function by metaproteome analysis. Biogas Science 2014 (International Conference on Anaerobic Digestion), Wien, Austria (2014)
Talk
Muth, T.; Behne, A.; Heyer, R.; Kohrs, F.; Benndorf, D.; Hoffmann, M.; Reichl, U.; Martens, L.: MetaProteomeAnalyzer – a software suite for the functional and taxonomic characterization of (meta)proteome data. 12th Austrian Proteomic Research Symposium, Salzburg, Austria (2014)
2013
Talk
Benndorf, D.; Kohrs, F.; Magnussen, A.; Heyer, R.; Rapp, E.; Kausmann, R.; Heierman, M.; Klocke, M.; Reichl, U.: Metaproteomics for process monitoring of biogas plants. 8th International Symposium on Anaerobic Microbiology (ISAM8), Innsbruck, Austria (2013)
Talk
Benndorf, D.; Kuhn, R.; Kohrs, F.; Schlegel, T.; Palese, L.L.; Pollice, A.; Hanreich, A.; Heyer, R.; Kausmann, R.; Heiermann, M. et al.; Klocke, M.; Rapp, E.; Reichl, U.: Metaproteomics for Process Monitoring in Environmental Biotechnology. Annual Conference of the Association for General and Applied Microbiology (VAAM), Bremen, Germany (2013)
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