Publications

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Journal Article (4)

  1. Journal Article
    Kanan, T.; Kanan, D.; Erol, I.; Yazdi, S.; Stein, M.; Durdagi, S.: Targeting the NF-κB/IκBα complex via fragment-based E-Pharmacophore virtual screening and binary QSAR models. Journal of Molecular Graphics and Modelling 86, pp. 264 - 277 (2019)
  2. Journal Article
    Yazdi, S.; Naumann, M.; Stein, M.: Double Phosphorylation-Induced Structural Changes in the Signal-Receiving Domain of IκBα in Complex with NF-κB. Proteins: Structure, Function, and Bioinformatics 85 (1), pp. 17 - 29 (2017)
  3. Journal Article
    Yazdi, S.; Stein, M.; Elinder, F.; Andersson, M.; Lindahl, E.: The Molecular Basis of Polyunsaturated Fatty Acid Interactions with the Shaker Voltage-Gated Potassium Channel. PLoS Computational Biology 12 (1), e1004704 (2016)
  4. Journal Article
    Yazdi, S.; Durdagi, S.; Naumann, M.; Stein, M.: Structural modeling of the N-terminal signal–receiving domain of IκBα. frontiers in Molecular Biosciences 2, 32 (2015)

Meeting Abstract (2)

  1. Meeting Abstract
    Edler, E.; Yazdi, S.; Stein, M.: The Molecular Systems Biology Of Signaling And Metabolic Networks. In 3rd INTERNATIONAL BAU-DRUG DESIGN CONGRESS: Novel Methods and Emerging Targets in Drug Discovery & Patented Drug Development, p. 41 - 41. 3rd INTERNATIONAL BAU-DRUG DESIGN CONGRESS: Novel Methods and Emerging Targets in Drug Discovery & Patented Drug Development, Istanbul, Turkey, October 01, 2015 - October 03, 2015. (2015)
  2. Meeting Abstract
    Yazdi, S.; Andersson, M.; Elinder, F.; Stein, M.; Lindahl, E.: Molecular Characterization of the Binding of Polyunsaturated Fatty Acids to a Voltage-Gated Potassium Channel. In Biophysical Journal (Annual Meeting Abstracts), 106 (2), p. 739A - 739A. 58th Annual Meeting of the Biophysical Society, San Francisco, USA, February 15, 2014 - February 19, 2014. Biophysical Society, Bethesda, MD (2014)

Talk (2)

  1. Talk
    Edler, E.; Yazdi, S.; Stein, M.: The Molecular Systems Biology Of Signaling And Metabolic Networks. 3rd INTERNATIONAL BAU-DRUG DESIGN CONGRESS: Novel Methods and Emerging Targets in Drug Discovery & Patented Drug Development, Istanbul, Turkey (2015)
  2. Talk
    Durdagi, S.; Yazdi, S.; Stein, M.: Analysis of Protein-Protein Interactions of the Site-specific Mono and tetra-Ubiquitin-associated IκBα / NF-κB Complexes. 6th Theoretical Biophysics Symposium 2013, Gothenburg, Sweden (2013)

Poster (5)

  1. Poster
    Yazdi, S.; Andersson, M.; Elinder, F.; Stein, M.; Lindahl, E.: Molecular Characterization of the Binding of Polyunsaturated Fatty Acids to a Voltage-Gated Potassium Channel. 58th Annual Meeting of the Biophysical Society, San Francisco, USA (2014)
  2. Poster
    Yazdi, S.; Durdagi, S.; Stein, M.: The structural biology of IκBα and NF-κB signalling. Signal Transduction: Receptors, Mediators and Genes 2013 Meeting, Weimar, Germany (2013)
  3. Poster
    Yazdi, S.; Durdagi, S.; Stein, M.: The interplay between phosphorylation of IκBα and its recognition by β-TrCP through MD simulation and protein-protein docking. TheoBio 2013 - 6th International Theoretical Biophysics Symposium, Gothenburg, Sweden (2013)
  4. Poster
    Yazdi, S.; Stein, M.: Unraveling the structural effects of phosphorylation on the human IκBα/NF-κB complex. ISMB/ECCB 2013 - 21st Annual International Conference on Intelligent Systems for Molecular Biology, 12th European Conference on Computational Biology, Berlin, Germany (2013)
  5. Poster
    Yazdi, S.; Stein, M.: Computational Molecular Systems Biology. IAS Winter School - Hierarchical Methods for Dynamics in Complex Molecular Systems, Jülich, Germany (2012)

Thesis - PhD (1)

  1. Thesis - PhD
    Yazdi, S.: The Structural Dynamics of Soluble and Membrane Proteins Explored through Molecular Simulations. Dissertation, 116 pp., Otto-von-Guericke-Universität, Magdeburg (2016)

Other (1)

  1. Other
    Yazdi, S.; Naumann, M.; Stein, M.: Cover Image, (2017)
 
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