Publications

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Journal Article (84)

  1. Journal Article
    Klamt, S.; Schuster, S.: Calculating as many fluxes as possible in underdetermined metabolic networks. Molecular Biology Reports 29 (1-2), pp. 243 - 248 (2002)
  2. Journal Article
    Schuster, S.; Klamt, S.; Weckwerth, W.; Moldenhauer, F.; Pfeiffer, T.: Use of network analysis of metabolic systems in bioengineering. Bioprocess and Biosystems Engineering 24 (6), pp. 363 - 372 (2002)
  3. Journal Article
    Schuster, S.; Klamt, S.: Applying metabolic pathway analysis to make good use of methanol. Trends in Biotechnology 20 (8), p. 322 (2002)
  4. Journal Article
    Stelling, J.; Klamt, S.; Bettenbrock, K.; Schuster, S.; Gilles, E. D.: Metabolic network structure determines key aspects of functionality and regulation. Nature 420 (6912), pp. 190 - 193 (2002)

Book Chapter (3)

  1. Book Chapter
    Klamt, S.; Haedicke, O.; von Kamp, A.: Stoichiometric and Constraint-Based Analysis of Biochemical Reaction Networks. In: Large-Scale Networks in Engineering and Life Sciences, pp. 263 - 316. Springer International Publishing, Cham (2014)
  2. Book Chapter
    Heise, S.; Flassig, R.; Klamt, S.: Benchmarking a Simple Yet Effective Approach for Inferring Gene Regulatory Networks from Systems Genetic Data. In: Gene Network Inference: Verification of Methods for Systems Genetic Data., pp. 33 - 47. Springer, Heidelberg (2013)
  3. Book Chapter
    Waddell, S. J.; Kamp von, A.; Klamt, S.; Neyrolles, O.: Host-pathogen interactions. In: Systems Biology of Tuberculosis, pp. 107 - 126. Springer, New York (2013)

Conference Paper (3)

  1. Conference Paper
    Ryll, A.; Bucher, J.; Niklas , J.; Klamt, S.: A fusion approach linking signaling logic and metabolic mass-flow kinetics in hepatocytes. In: Computational Methods in Systems Biology: 11th International Conference, CMSB 2013, pp. 255 - 256. 11th International Conference on Computational Methods in Systems Biology CMSB 13, Klosterneuburg, Austria, September 22, 2013 - September 24, 2013. (2013)
  2. Conference Paper
    Bohl, K.; Figueiredo, L.F.; Hädicke, O.; Klamt, S.; Kost, C.; Schuster, S.; Kaleta, C.: CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networks. In: German Conference on Bioinformatics 2010, pp. 71 - 80 (Eds. Schomburg, D.; Grote, A.). German Conference on Bioinformatics 2010, Braunschweig, Germany, September 20, 2010 - September 22, 2010. (2010)
  3. Conference Paper
    Klamt, S.; Kremling, A.; Gilles, E. D.: FluxAnalyzer: a graphical user interface for stoichiometric and quantitative analysis of metabolic networks. 8th IFAC Internationall Conference on Computer Applications in Biotechnology, Québec, June 24, 2001 - June 27, 2001. IFAC Proceedings Volumes, pp. 119 - 124 (2001)

Talk (4)

  1. Talk
    Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid production. Himmelfahrtstagung "Models for Developing and Optimising Biotech Production", Neu-Ulm, Germany (2017)
  2. Talk
    Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid production. Systems Biology meets Synthetic Biology, Frankfurt am Main, Germany (2017)
  3. Talk
    Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid production. Annual Conference 2016 of the Association for General and Applied Microbiology (VAAM), Jena, Germany (2016)
  4. Talk
    Koch, S.; Benndorf, D.; Reichl, U.; Klamt, S.: Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process. Annual Conference 2016 of the Association for General and Applied Microbiology (VAAM), Jena, Germany (2016)

Poster (6)

  1. Poster
    Koch, S.; Benndorf, D.; Kohrs, F.; Lahmann, P.; Reichl, U.; Klamt, S.: Strategies for Modeling of Large-Scale Metabolic Models of Microbial Communities. Metabolic Pathway Analysis 2017, Bozeman, Montana, USA (2017)
  2. Poster
    Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-Based Metabolic Engineering of Escherichia Coli for High Yield Itaconic Acid Production. 6th International Conference on Foundations of Systems Biology in Engineering, Magdeburg, Germany (2016)
  3. Poster
    Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-Based Metabolic Engineering of Escherichia coli for High Yield Itaconic Acid Production. Metabolic Engineering 11, Kobe, Japan (2016)
  4. Poster
    Koch, S.; Benndorf, D.; Reichl, U.; Klamt, S.: New Methods for Modeling of Microbial Communities with Stoichiometric Metabolic Models. 6th International Conference on Foundations of Systems Biology in Engineering, Magdeburg, Germany (2016)
  5. Poster
    Koch, S.; Benndorf, D.; Reichl, U.; Klamt, S.: Prediction of Community Compositions in Stoichiometric Community Models. 4th Conference on Constraint-Based Reconstruction and Analysis, Heidelberg, Germany (2015)
  6. Poster
    Flassig, R.; Heise, S.; Sundmacher, K.; Klamt, S.: An effective Framework for Gene RegulatoryNetwork Reconstruction from Genetical Genomics Data. GCB 2012, Jena, Germany (2012)
 
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