Open Access Publications at MPI Magdeburg

Journal Article (963)

2024
Journal Article
Bauer, J.; Klamt, S.: OptMSP: A Toolbox for Designing Optimal Multi-Stage (Bio)Processes. Journal of Biotechnology 383, pp. 94 - 102 (2024)
Journal Article
Behrendt, G.; Vlachonikolou, M.; Tietgens, H.; Bettenbrock, K.: Construction and comparison of different vehicles for heterologous gene expression in Zymomonas mobilis. Microbial Biotechnology 17 (1), e14381 (2024)
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Benner, P.; Goyal, P. K.; Van Dooren, P.: Parameterized Interpolation of Passive Systems. SIAM journal on Matrix Analysis and Applications (accepted)
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Benner, P.; Gugercin, S.; Werner, S. W. R.: Structured Interpolation for Multivariate Transfer Functions of Quadratic-Bilinear Systems. Advances in Computational Mathematics 50, 18 (2024)
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Chellappa, S.; Feng, L.; Benner, P.: Accurate Error Estimation for Model Reduction of Nonlinear Dynamical Systems via Data-enhanced Error Closure. Computer Methods in Applied Mechanics and Engineering 420, 116712 (2024)
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Espinel-Rios, S.; Morabito, B.; Pohlodek, J.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Toward a modeling, optimization, and predictive control framework for fed-batch metabolic cybergenetics. Biotechnology and Bioengineering 121 (1), pp. 366 - 379 (2024)
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Feng, L.; Chellappa, S.; Benner, P.: A Posteriori Error Estimation for Model Order Reduction of Parametric Systems. Advanced Modeling and Simulation in Engineering Sciences 11, 5 (2024)
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Göbel, S.; Pelz, L.; Silva, C. A. T.; Brühlmann, B.; Hill, C.; Altomonte, J.; Kamen, A.; Reichl, U.; Genzel, Y.: Production of recombinant vesicular stomatitis virus-based vectors by tangential flow depth filtration. Applied Microbiology and Biotechnology 108 (1), 240 (2024)
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Grundel, S.; Sarna, N.: Hyper-Reduction for Parametrized Transport Dominated Problems via Adaptive Reduced Meshes. Partial Differential Equations and Applications 5 (1), 3 (2024)
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Heyer, R.; Hellwig, P.; Maus, I.; Walke, D.; Schlüter, A.; Hassa, J.; Sczyrba, A.; Tubbesing, T.; Klocke, M.; Mächtig, T. et al.; Schallert, K.; Seick, I.; Reichl, U.; Benndorf, D.: Breakdown of hardly degradable carbohydrates (lignocellulose) in a two-stage anaerobic digestion plant is favored in the main fermenter. Water Research 250, 121020 (2024)
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Huber, N.; Alcalá Orozco, E. A.; Rexer, T.; Reichl, U.; Klamt, S.: Model-based optimization of cell-free enzyme cascades exemplified for the production of GDP-fucose. Metabolic Engineering 81, pp. 10 - 25 (2024)
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Kapadia, H.; Feng, L.; Benner, P.: Active-Learning-Driven Surrogate Modeling for Efficient Simulation of Parametric Nonlinear Systems. Computer Methods in Applied Mechanics and Engineering 419, 116657 (2024)
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Leipold, J.; Jung, M.; Keßler, T.; Kienle, A.: Nonlinear Behavior of Methanol Synthesis Compared to CO2 Methanation. Chemical Engineering and Technology 47 (3), pp. 531 - 536 (2024)
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Liljegren-Sailer, B.; Gosea, I. V.: Data-Driven and Low-Rank Implementations of Balanced Singular Perturbation Approximation. SIAM Journal on Scientific Computing 46 (1), pp. A483 - A507 (2024)
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Otrin, N.; Otrin, L.; Bednarz, C.; Träger, T. K.; Hamdi, F.; Kastritis, P. L.; Ivanov, I.; Sundmacher, K.: Protein-Rich Rafts in Hybrid Polymer/Lipid Giant Unilamellar Vesicles. Biomacromolecules 25 (2), pp. 778 - 791 (2024)
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Pelz, L.; Dogra, T.; Marichal-Gallardo, P.; Hein, M. D.; Hemissi, G.; Kupke, S. Y.; Genzel, Y.; Reichl, U.: Production of antiviral “OP7 chimera” defective interfering particles free of infectious virus. Applied Microbiology and Biotechnology 108, pp. 1 - 15 (2024)
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Ponnudurai, A.; Schulze, P.; Seidel-Morgenstern, A.; Lorenz, H.: Effect of feed concentration in solvent/anti-solvent precipitation fractionation of lignin: Impact on lignins structure-property correlations. Separation and Purification Technology 337, 126343 (2024)
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Przybilla, J.; Pontes Duff, I.; Benner, P.: Model Reduction for Second-Order Systems with Inhomogeneous Initial Conditions. Systems & Control Letters 183, 105671 (2024)
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Raabe, J.-C.; Jameel, F.; Stein, M.; Albert, J.; Poller, M. J.: Heteroelements in polyoxometalates: a study on the influence of different group 15 elements on polyoxometalate formation. Dalton Transactions 53, pp. 454 - 466 (2024)
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Riedel, R.; Commichau, F. M.; Benndorf, D.; Hertel, R.; Holzer, K.; Hoelzle, L. E.; Mardoukhi, M. S. Y.; Noack, L. E.; Martienssen, M.: Biodegradation of selected aminophosphonates by the bacterial isolate Ochrobactrum sp. BTU1. Microbiological Research 280, 127600 (2024)
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Skrypnik, I.; Yevgenieva, Y.: Harnack Inequality for Solutions of the p(x)-Laplace Equation under the precise Non-Logarithmic Zhikov's Conditions. Calculus of variations and partial differential equations 63 (1), 7 (2024)
Journal Article
Svitnič, T.; Beer, K.; Sundmacher, K.; Böcher, M.: Optimal design of a sector-coupled renewable methanol production amid political goals and expected conflicts: Costs vs. land use. Sustainable Production and Consumption 44, pp. 123 - 150 (2024)
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Tan, Q.; Hosseini, S.A.; Seidel-Morgenstern, A.; Thévenin, D.; Lorenz, H.: Thermal effects connected to crystallization dynamics: A lattice Boltzmann study. International Journal of Multiphase Flow 171, 104669 (2024)
Journal Article
Vhora, K.; Janiga, G.; Lorenz, H.; Seidel-Morgenstern, A.; Gutiérrez Sanchez, F. M.; Schulze, P.: Comparative Study of Droplet Diameter Distribution: Insights from Experimental Imaging and Computational Fluid Dynamics Simulations. Applied Sciences 14 (5), 1824 (2024)
2023
Journal Article
Alavia, W.; Seidel-Morgenstern, A.; Hermsdorf, D.; Lorenz, H.; Graber, T. A.: Real-Time Crystal Growth Monitoring of Boric Acid from Sodium or Lithium Sulfate Containing Aqueous Solutions by Atomic Force Microscopy. ACS Omega 8 (12), pp. 10822 - 10835 (2023)
Journal Article
Alcalá Orozco, E. A.; Grote, V.; Fiebig, T.; Klamt, S.; Reichl, U.; Rexer, T.: A Cell‐Free Multi‐enzyme Cascade Reaction for the Synthesis of CDP‐Glycerol. ChemBioChem: A European Journal of Chemical Biology 24 (21), e202300463 (2023)
Journal Article
Altaf, H.; Miličić, T.; Vidaković-Koch, T.; Tsotsas, E.; Tengattini, A.; Kardjilov, N.; Arlt, T.; Manke, I.; Vorhauer-Huget, N.: Neutron Imaging Experiments to Study Mass Transport in Commercial Titanium Felt Porous Transport Layers. Journal of The Electrochemical Society 170, 064507 (2023)
Journal Article
Aumann, Q.; Gosea, I. V.: Practical Challenges in Data-Driven Interpolation: Dealing with Noise, enforcing Stability, and Computing Realizations. International Journal of Adaptive Control and Signal Processing (2023)
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Aumann, Q.; Werner, S. W. R.: Structured Model Order Reduction for Vibro-Acoustic Problems using Interpolation and Balancing Methods. Journal of Sound and Vibration 543, 117363 (2023)
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Barrera, J.; H. Haeri, H.; Heinrich, J.; Stein, M.; Hinderberger, D.; Kulak, N.: Impact of N-heteroaromatic N-termini in Cu(ii) ATCUN metallopeptides on their biorelevant redox activity. Dalton Transactions 52 (11), pp. 3279 - 3286 (2023)
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Bekiaris, P. S.; Klamt, S.: Network-wide thermodynamic constraints shape NAD(P)H cofactor specificity of biochemical reactions. Nature Communications 14, 4660 (2023)
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Benner, P.; Chuiko, S.; Zuyev, A.: A Periodic Boundary Value Problem with Switchings under Nonlinear Perturbations. Boundary Value Problems, 50, 12 pages (2023)
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Benner, P.; Gugercin, S.; Werner, S. W. R.: A Unifying Framework for Tangential Interpolation of Structured Bilinear Control Systems. Numerische Mathematik 155, pp. 445 - 483 (2023)
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Benner, P.; Heiland, J.: Space and Chaos-Expansion Galerkin Proper Orthogonal Decomposition Low-order Discretization of PDEs for Uncertainty Quantification. International Journal for Numerical Methods in Engineering 124 (12), pp. 2801 - 2817 (2023)
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Benner, P.; Heiland, J.; Werner, S. W. R.: A Low-Rank Solution Method for Riccati Equations with Indefinite Quadratic Terms. Numerical Algorithms 92, pp. 1083 - 1103 (2023)
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Benner, P.; Nakatsukasa, Y.; Penke, C.: A Structure-Preserving Divide-and-Conquer Method for Pseudosymmetric Matrices. SIAM journal on Matrix Analysis and Applications 44 (3), pp. 1245 - 1270 (2023)
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Benner, P.; Palitta, D.; Saak, J.: On an integrated Krylov-ADI Solver for Large-Scale Lyapunov Equations. Numerical Algorithms 92, pp. 35 - 63 (2023)
Journal Article
Boecker, S.; Schulze, P.; Klamt, S.: Growth-coupled anaerobic production of isobutanol from glucose in minimal medium with Escherichia coli. Biotechnology for Biofuels and Bioproducts 16, 148 (2023)
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Boege, T.; Fritze, R.; Görgen, C.; Hanselman, J.; Iglezakis, D.; Kastner, L.; Koprucki, T.; Krause, T.; Lehrenfeld, C.; Polla, S. et al.; Reidelbach, M.; Riedel, C.; Saak, J.; Schembera, B.; Tabelow, K.; Weber, M.: Research-Data Management Planning in the German Mathematical Community. EMS Magazine 130, pp. 40 - 47 (2023)
Journal Article
Burock, R.; Cajic, S.; Hennig, R.; Buettner, F. F. R.; Reichl, U.; Rapp, E.: Reliable N-Glycan Analysis–Removal of Frequently Occurring Oligosaccharide Impurities by Enzymatic Degradation. Molecules 28 (4), 1843 (2023)
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Cajic, S.; Hennig, R.; Grote, V.; Reichl, U.; Rapp, E.: Removable Dyes—The Missing Link for In-Depth N-glycan Analysis via Multi-Method Approaches. Engineering 26, pp. 132 - 150 (2023)
Journal Article
Chellappa, S.; Cansız, B.; Feng, L.; Benner, P.; Kaliske, M.: Fast and Reliable Reduced-Order Models for Cardiac Electrophysiology. GAMM-Mitteilungen 46 (3-4), e202370014 (2023)
Journal Article
Chellappa, S.; Feng, L.; de la Rubia, V.; Benner, P.: Inf-Sup-Constant-Free State Error Estimator for Model Order Reduction of Parametric Systems in Electromagnetics. IEEE Transactions on Microwave Theory and Techniques 71 (11), pp. 4762 - 4777 (2023)
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Chen, G.; Song, Z.; Qi, Z.; Sundmacher, K.: Generalizing property prediction of ionic liquids from limited labeled data: a one-stop framework empowered by transfer learning. Digital Discovery 2, pp. 591 - 601 (2023)
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Cheng, C.; Wei, G.; Zhisong , O.; Sundmacher, K.; Thévenin, D.: Direct numerical simulations of polypropylene gasification in supercritical water. Physics of Fluids 35 (6), 063321 (2023)
Journal Article
Creutznacher, R.; Schulze-Niemand, E.; König, P.; Stanojlovic, V.; Mallagaray, A.; Peters, T.; Stein, M.; Schubert, M.: Conformational Control of Fast Asparagine Deamidation in a Norovirus Capsid Protein. Biochemistry 62 (5), pp. 1032 - 1043 (2023)
Journal Article
Dam, A. P.; Abuthaher, B. Y. A.; Papakonstantinou, G.; Sundmacher, K.: Insights into the Path-Dependent Charge of Iridium Dissolution Products and Stability of Electrocatalytic Water Splitting. Journal of The Electrochemical Society 170, 064504 (2023)
Journal Article
Dogra, T.; Pelz, L.; Boehme, J. D.; Küchler, J.; Kershaw, O.; Marichal-Gallardo, P.; Baelkner, M.; Hein, M. D.; Gruber, A. D.; Benndorf, D. et al.; Genzel, Y.; Bruder, D.; Kupke, S. Y.; Reichl, U.: Generation of “OP7 chimera” defective interfering influenza A particle preparations free of infectious virus that show antiviral efficacy in mice. Scientific Reports 13, 20936 (2023)
Journal Article
Feng, L.; Lombardi, L.; Antonini, G.; Benner, P.: Multi-fidelity Error Estimation accelerates Greedy Model Reduction of Complex Dynamical Systems. International Journal for Numerical Methods in Engineering 124 (23), pp. 5312 - 5333 (2023)
Journal Article
Franz, T.; Papakonstantinou, G.; Sundmacher, K.: Transient hydrogen crossover in dynamically operated PEM water electrolysis cells - A model-based analysis. Journal of Power Sources 559, 232582 (2023)
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