Open Access Publications at MPI Magdeburg

Journal Article

Bekiaris, P. S.; Klamt, S.: Automatic construction of metabolic models with enzyme constraints. BMC Bioinformatics 21, 19 (2020)

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Journal Article

Benner, P.; Breiten, T.; Hartmann, C.; Schmidt, B.: Model Reduction of Controlled Fokker-Planck and Liouville-von Neumann Equations. Journal of Computational Dynamics (accepted)

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Journal Article

Benner, P.; Heinkenschloss, M.; Saak, J.; Weichelt, H. K.: Efficient Solution of Large-Scale Algebraic Riccati Equations Associated with Index-2 DAEs via the Inexact Low-Rank Newton-ADI Method. Applied Numerical Mathematics 152, pp. 338 - 354 (2020)

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Benner, P.; Trautwein, C.: Optimal Distributed and Tangential Boundary Control for the Unsteady Stochastic Stokes Equations. ESAIM: Control, Optimisation and Calculus of Variations (accepted)

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Journal Article

Benner, P.; Bujanović, Z.; Kürschner, P.; Saak, J.: A Numerical Comparison of Different Solvers for Large-Scale, Continuous-Time Algebraic Riccati Equations and LQR Problems. SIAM Journal on Scientific Computing (accepted)

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Journal Article

Benner, P.; Werner, S. W. R.: Hankel-Norm Approximation of Large-Scale Descriptor Systems. Advances in Computational Mathematics (accepted)

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Journal Article

Cascella, F.; Seidel-Morgenstern, A.; Lorenz, H.: Exploiting Ternary Solubility Phase Diagrams for Resolution of Enantiomers: An Instructive Example. Chemical Engineering and Technology 43 (2), pp. 329 - 336 (2020)

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Journal Article

Fachet, M.; Witte, C.; Flassig, R.; Rihko-Struckmann, L.; McKie-Krisberg, Z.; Polle, J.; Sundmacher, K.: Reconstruction and analysis of a carbon-core metabolic network for Dunaliella salina. BMC Bioinformatics 21, 1 (2020)

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Journal Article

Gosea, I. V.; Zhang, Q.; Antoulas, A. C.: Preserving the DAE Structure in the Loewner Model Reduction and Identiﬁcation Framework. Advances in Computational Mathematics 46, 3 (2020)

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Journal Article

Isakov, A. I.; Lorenz, H.; Zolotarev Jr, A. A.; Kotelnikova, E. N.: Heteromolecular compounds in binary systems ofamino acids with opposite and same chiralities. CrystEngComm 22, pp. 986 - 997 (2020)

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Journal Article

Leoz, D.; A., M. L.; Duewer, D. L.; Fung, A.; Liu, L.; Yau, H. K.; Potter, O.; Staples, G. O.; Furuki, K.; Frenkel, R. et al.; Hu, Y.; Sosic, Z.; Zhang, P.; Altmann, F.; Gruber, C.; Shao, C.; Zaia, J.; Evers, W.; Pangelley, S.; Suckau, D.; Wiechmann, A.; Resemann, A.; Jabs, W.; Beck, A.; Froehlich, J. W.; Huang, C.; Li, Y.; Liu, Y.; Sun, S.; Wang, Y.; Seo, Y.; An, H. J.; Reichardt, N.-C.; Ruiz, J. E.; Archer‑Hartmann, S.; Azadi, P.; Bell, L.; Lakos, Z.; An, Y.; Cipollo, J. F.; Pučić-Baković, M.; Štambuk, J.; Lauc, G.; Li, X.; Wang, P. G.; Bock, A.; Hennig, R.; Rapp, E.; Creskey, M.; Cyr, T.; Nakano, M.; Sugiyama, T.; Leung, P. A.; Link‑Lenczowski, P.; Jaworek, J.; Yang, S. J.; Zhang, H.; Kelly, T.; Klapoetke, S.; Cao, R.; Kim, J. Y.; Lee, H. K.; Lee, J.; Yoo, J. S.; Kim, S.; Suh, S.; de Haan, N.; Falck, D.; Lageveen-Kammeijer, G. S.M.; Wuhrer, M.; Emery, R. J.; Kozak, R. P.; Liew, L. P.; Royle, L.; Urbanowicz, P. A.; Packer, N.; Song, X.; Everest-Dass, A.; Lattová, E.; Cajic, S.; Alagesan, K.; Kolarich, D.; Kasali, T.; Lindo, V.; Chen, Y.; Goswami, K.; Gau, B.; Amunugama, R.; Jones, R.; Stroop, C. J. M.; Kato, K.; Yagi, H.; Kondo, S.; Yuen, C.; Harazono, A.; Shi, X.; Magnelli, P.; Kasper, B. T.; Mahal, L. K.; Harvey, D. J.; O'Flaherty, R.; Rudd, P. M.; Saldova, R.; Hecht, E. S.; Muddiman, D. C.; Kang, J.; Bhoskar, P.; Menard, D.; Saati, A.; Merle, C.; Mast, S.; Tep, S.; Truong, J.; Nishikaze, T.; Sekiya, S.; Shafer, A.; Funaoka, S.; Toyoda, M.; de Vreugd, P.; Caron, C.; Pradhan, P.; Tan, N. C.; Mechref, Y.; Patil, S.; Rohrer, J. S.; Chakrabarti, R.; Dadke, D.; Lahori, M.; Zou, C.; Cairo, C. W.; Reiz, B.; Whittal, R. M.; Lebrilla, C.; Wu, L. D.; Guttman, A.; Szigeti, M.; Kremkow, B. G.; Lee, K.; Sihlbom, C.; Adamczyk, B.; Jin, C.; Karlsson, N. G.; Örnros, J.; Larson, G.; Nilsson, J.; Meyer, B.; Wiegandt, A.; Komatsu, E.; Perreault, H.; Bodnar, E. D.; Said, N.; Francois, Y.; Leize-Wagner, E.; Maier, S.; Zeck, A.; Heck, A. J. R.; Yang, Y.; Haselberg, R.; Yu, Y. Q.; Alley, W.; Leone, J. W.; Yuan, H.; Stein, S. E.: NIST interlaboratory study on glycosylation analysis of monoclonal antibodies: comparison of results from diverse analytical methods. Molecular and Cellular Proteomics 19 (1), pp. 11 - 30 (2020)

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Journal Article

Mena, H.; Pfurtscheller, L.-M.; Stillfjord, T.: GPU Acceleration of Splitting Schemes Applied to Differential Matrix Equations. Numerical Algorithms 83 (1), pp. 395 - 419 (2020)

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Journal Article

Palitta, D.; Valeria, S.: Optimality Properties of Galerkin and Petrov-Galerkin Methods for Linear Matrix Equations. Vietnam Journal of Mathematics: Special Issue dedicated to Volker Mehrmann's 65th birthday (accepted)

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Journal Article

Pontes Duff, I.; Grundel, S.; Benner, P.: New Gramians for Linear Switched Systems: Reachability, Observability, and Model Reduction. IEEE Transactions on Automatic Control (accepted)

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Journal Article

Rodrigues Correia Ramos, J.; Rath, A.; Genzel, Y.; Sandig, V.; Reichl, U.: A dynamic model linking cell growth to intracellular metabolism and extracellular by‐product accumulation. Biotechnology and Bioengineering (accepted)

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Journal Article

Schaffert, A.; Hanić, M.; Novokmet, M.; Zaytseva, O.; Krištić, J.; Lux, A.; Nitschke, L.; Peipp, M.; Pezer, M.; Hennig, R. et al.; Rapp, E.; Lauc, G.; Nimmerjahn, F.: Minimal B Cell Extrinsic IgG Glycan Modifications of Pro- and Anti-Inflammatory IgG Preparations in vivo. Frontiers in Immunology 10, 3024 (2020)

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Journal Article

Uche, U. D.; Qamar, S.; Seidel-Morgenstern, A.: Numerical approximation of a nonisothermal two‐dimensional general rate model of reactive liquid chromatography. International Journal of Chemical Kinetics 52 (2), pp. 134 - 155 (2020)

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Journal Article

Varničić, M.; Zasheva, I. N.; Haak, E.; Sundmacher, K.; Vidaković-Koch, T.: Selectivity and Sustainability of Electroenzymatic Process for Glucose Conversion to Gluconic Acid. Catalysts 10 (3), 269 (2020)

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Journal Article

Zhang, C.; Song, Z.; Jin, C.; Nijhuis, J.; Zhou, T.; Noël, T.; Gröger, H.; Sundmacher, K.; van Hest, J.; Hessel, V.: Screening of functional solvent system for automatic aldehyde and ketone separation in aldol reaction: A combined COSMO-RS and experimental approach. Chemical Engineering Journal 385, 123399 (2020)

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Journal Article

Zhou, T.; McBride, K.; Linke, S.; Song, Z.; Sundmacher, K.: Computer-aided solvent selection and design for efficient chemical processes. Current Opinion in Chemical Engineering 27, pp. 35 - 44 (2020)

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Journal Article

Zhou, X.; Li, X.; Liu, F.; Ge, W.; Ma, X.; Tian, Y.; Li, G.; Zhang, J.; Qiu, Y.: The Comprehensive Evaluation Model of Power Supply Capacity for Regional-Oriented Distribution Network. Neural Computing and Applications (accepted)

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Journal Article

Zimmermann, R. T.; Bremer, J.; Sundmacher, K.: Optimal catalyst particle design for flexible fixed-bed CO₂methanation reactors. Chemical Engineering Journal 387, 123704 (2020)

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2019

Journal Article

Ahmad, M. I.; Benner, P.; Feng, L.: A New Two-Sided Projection Technique for Model Reduction of Quadratic-Bilinear Descriptor Systems. International Journal of Computer Mathematics 96 (10), pp. 1899 - 1909 (2019)

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Journal Article

Ahmad, A. G.; Qamar, S.; Seidel-Morgenstern, A.: Linearized non-equilibrium and non-isothermal two-dimensional model of liquid chromatography for studying thermal effects in cylindrical columns. Journal of Liquid Chromatography & Related Technologies 42 (13-14), pp. 436 - 451 (2019)

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Journal Article

Aslam, R. D.; Ali, A.; Rehman, A.; Qamar, S.: The space-time conservation element and solution element scheme for simulating two-phase flow in pipes. Advances in Mechanical Engineering 11 (12), pp. 1 - 12 (2019)

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Journal Article

Baumann, M.; Grundel, S.; Sauerteig, P.; Worthmann, K.: Surrogate Models in Bidirectional Optimization of Coupled Microgrids. at-Automatisierungstechnik 67 (12), pp. 1035 - 1046 (2019)

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Journal Article

Bdeir, N.; Arora, P.; Gärtner, S.; Hoffmann, M.; Reichl, U.; Pöhlmann, S.; Winkler, M.: A system for production of defective interfering particles in the absence of infectious influenza A virus. PLoS One 14 (3), e0212757 (2019)

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Journal Article

Bechtel, S.; Sorrentino, A.; Vidaković-Koch, T.; Weber, A. Z.; Sundmacher, K.: Electrochemical gas phase oxidation of hydrogen chloride to chlorine: Model-based analysis of transport and reaction mechanisms. Electrochimica Acta 324, 134780 (2019)

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Journal Article

Behr, M.; Benner, P.; Heiland, J.: Solution Formulas for Differential Sylvester and Lyapunov Equations. CALCOLO: A Quarterly on Numerical Analysis and Theory of Computation 56 (4), 51 (2019)

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Journal Article

Benner, P.; Herzog, R.; Lang, N.; Riedel, I.; Saak, J.: Comparison of Model Order Reduction Methods for Optimal Sensor Placement for Thermo-Elastic Models. Engineering Optimization 51 (3), pp. 465 - 483 (2019)

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Journal Article

Benner, P.; Himpe, C.: Cross-Gramian-Based Dominant Subspaces. Advances in Computational Mathematics 45 (5-6), pp. 2533 - 2553 (2019)

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Journal Article

Benner, P.; Cao, X.; Schilders, W.: A Bilinear H₂ Model Order Reduction Approach to Linear Parameter-Varying Systems. Advances in Computational Mathematics 45 (5-6), pp. 2533 - 2553 (2019)

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Journal Article

Benner, P.; Onwunta, A.; Stoll, M.: A Low-Rank Inexact Newton-Krylov Method for Stochastic Eigenvalue Problems. Computational Methods in Applied Mathematics 19 (1), pp. 5 - 22 (2019)

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Journal Article

Benner, P.; Khoromskaia, V.; Khoromskij, B. N.; Yang, C.: Computing the Density of States for Optical Spectra of Molecules by Low-Rank and QTT Tensor Approximation. Journal of Computational Physics 382, pp. 221 - 239 (2019)

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Journal Article

Benner, P.; Mitchell, T.: Extended and Improved Criss-Cross Algorithms for Computing the Spectral Value Set Abscissa and Radius. SIAM Journal on matrix analysis and applications 40 (4), pp. 1325 - 1352 (2019)

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Journal Article

Benner, P.; Dufrechou, E.; Ezzatti, P.; Remón, A.; Saak, J.: A GPU-Aware Mixed-Precision Solver for Low-Rank Algebraic Riccati Equations. Concurrency and Computation: Practice and Experience 31 (6), e4462 (2019)

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Journal Article

Benner, P.; Trautwein, C.: Optimal Control Problems Constrained by the Stochastic Navier-Stokes Equations with Multiplicative Lévy Noise. Mathematische Nachrichten 292 (7), pp. 1444 - 1461 (2019)

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Journal Article

Benner, P.; Seidel-Morgenstern, A.; Zuyev, A.: Periodic Switching Strategies for an Isoperimetric Control Problem with Application to Nonlinear Chemical Reactions. Applied Mathematical Modelling 69, pp. 287 - 300 (2019)

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Journal Article

Bissinger, T.; Fritsch, J.; Mihut, A. N.; Wu, Y.; Liu, X.; Genzel, Y.; Tan, W.-S.; Reichl, U.: Semi-perfusion cultures of suspension MDCK cells enable high cell concentrations and efficient influenza A virus production. Vaccine 37 (47), pp. 7003 - 7010 (2019)

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Journal Article

Boecker, S.; Zahoor, A.; Schramm, T.; Link, H.; Klamt, S.: Broadening the Scope of Enforced ATP Wasting as a Tool for Metabolic Engineering in Escherichia coli. Biotechnology Journal 14 (9), 1800438 (2019)

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Journal Article

Bremer, J.; Sundmacher, K.: Operation range extension via hot-spot control for catalytic CO₂ methanation reactors. Reaction Chemistry & Engineering 6 (4), pp. 1019 - 1037 (2019)

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Journal Article

Brhane, K. W.; Qamar, S.; Seidel-Morgenstern, A.: Two-Dimensional General Rate Model of Liquid Chromatography Incorporating Finite Rates of Adsorption−Desorption Kinetics and Core−Shell Particles. Industrial and Engineering Chemistry Research 58, pp. 8296 - 8308 (2019)

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Journal Article

Brune, A.; Wolff, T.; Seidel-Morgenstern, A.; Hamel, C.: Analysis of Membrane Reactors for Integrated Coupling of Oxidative and Thermal Dehydrogenation of Propane. Chemie-Ingenieur-Technik 91 (5), pp. 645 - 650 (2019)

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Journal Article

Bule, P.; Chuzel, L.; Blagova, E.; Wu, L.; Gray, M. A.; Henrissat, B.; Rapp, E.; Bertozzi, C. R.; Taron, C. H.; Davies, G. J.: Inverting family GH156 sialidases define an unusual catalytic motif for glycosidase action. Nature Communications 10, 4816 (2019)

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Journal Article

Carneiro, T.; Bhandari, S.; Temmel, E.; Lorenz, H.; Seidel-Morgenstern, A.: Shortcut Model for Describing Isothermal Batch Preferential Crystallization of Conglomerates and Estimating the Productivity. Crystal Growth & Design 19, pp. 5189 - 5203 (2019)

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Journal Article

Coronel, J.; Behrendt, I.; Bürgin, T.; Anderlei, T.; Sandig, V.; Reichl, U.; Genzel, Y.: Influenza A virus production in a single-use orbital shaken bioreactor with ATF or TFF perfusion systems. Vaccine 37 (47), pp. 7011 - 7018 (2019)

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Journal Article

Dreimann, J. M.; Kohls, E.; Warmeling, H. F. W.; Stein, M.; Guo, L. F.; Garland, M.; Dinh, T. N.; Vorholt, A. J.: In Situ Infrared Spectroscopy as a Tool for Monitoring Molecular Catalyst for Hydroformylation in Continuous Processes. ACS Catalysis 9, pp. 4308 - 4319 (2019)

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Journal Article

Edler, E.; Stein, M.: Recognition and stabilization of geranylgeranylated human Rab5 by the GDP Dissociation Inhibitor (GDI). Small GTPases 10 (3), pp. 227 - 242 (2019)

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Journal Article

Feng, L.; Benner, P.: New Error Estimator for Reduced-order Modeling of Linear Parametric Systems. IEEE Transactions on Microwave Theory and Techniques 67 (12), pp. 4848 - 4859 (2019)

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