MPG.PuRe Contact at MPI Magdeburg

Kristina Reinhold
Kristina Reinhold
Head Librarian
Phone:+49 391 6110-146

OA Ambassadors at MPI Magdeburg

Dr. Jan Heiland
Dr. Jan Heiland
Team leader

Phone: +49 391 6110 476
Room: S2.13
Jens Bremer, M. Sc.
Jens Bremer, M. Sc.
Phone: +49 391 6110 412
Room: N 3.08

OA Publications at MPI Magdeburg

Open Access Publications at MPI Magdeburg

Journal Article (39)

  1. Journal Article
    Ahuja, K.; Benner, P.; de Sturler, E.; Feng, L.: Recycling BiCGSTAB with an Application to Parametric Model Order Reduction. SIAM Journal on Scientific Computing 37 (5), pp. S429 - S446 (2015)
  2. Journal Article
    Altmann, R.; Heiland, J.: Finite Element Decomposition and Minimal Extension for Flow Equations. ESAIM: Mathematical Modelling and Numerical Analysis 49 (5), pp. 1489 - 1509 (2015)
  3. Journal Article
    Auer, A. A.; Cap, S.; Antonietti, M.; Cherevko, S.; Deng, X.; Papakonstantinou, G.; Sundmacher, K.; Brüller, S.; Antonyshyn, I.; Dimitratos, N. et al.; Davis, R. J.; Böhm, K.-H.; Fechler, N.; Freakley, S.; Grin, Y.; Gunnoe, B. T.; Haj-Hariri, H.; Hutchings, G.; Liang, H.; Mayrhofer, K. J. J.; Muellen, K.; Neese, F.; Ranjan, C.; Sankar, M.; Schlögl, R.; Schüth, F.; Spanos, I.; Stratmann, M.; Tüysüz, H.; Vidaković-Koch, T.; Yi , Y.; Zangari, G.: MAXNET Energy – Focusing Research in Chemical Energy Conversion on the Electrocatlytic Oxygen Evolution. Green 5 (1-6), pp. 7 - 21 (2015)
  4. Journal Article
    Bänsch, E.; Benner, P.; Saak, J.; Weichelt, H. K.: Riccati-Based Boundary Feedback Stabilization of Incompressible Navier-Stokes Flow. SIAM Journal on Scientific Computing 37 (2), pp. A832 - A858 (2015)
  5. Journal Article
    Benner, P.; Heiland, J.: Time-dependent Dirichlet Conditions in Finite Element Discretizations. ScienceOpen Research, pp. 1 - 18 (2015)
  6. Journal Article
    Benner, P.; Breiten, T.: Two-Sided Projection Methods for Nonlinear Model Order Reduction. SIAM Journal on Scientific Computing 37 (2), pp. B239 - B260 (2015)
  7. Journal Article
    Benner, P.; Schneider, J.: Uncertainty Quantification for Maxwell's Equations Using Stochastic Collocation and Model Order Reduction. International Journal for Uncertainty Quantification 5 (3), pp. 195 - 208 (2015)
  8. Journal Article
    Benner, P.; Gugercin, S.; Willcox, K.: A Survey of Projection-Based Model Reduction Methods for Parametric Dynamical Systems. SIAM Review 57 (4), pp. 483 - 531 (2015)
  9. Journal Article
    Benner, P.; Onwunta, A.; Stoll, M.: Low-Rank Solution of Unsteady Diffusion Equations with Stochastic Coefficients. SIAM/ASA Journal on Uncertainty Quantification 3 (1), pp. 622 - 649 (2015)
  10. Journal Article
    Bosch, J.; Stoll, M.: A fractional inpainting model based on the vector-valued Cahn–Hilliard equation. SIAM Journal on Imaging Sciences 8 (4), pp. 2352 - 2382 (2015)
  11. Journal Article
    D`Allessandro, L. A.; Samaga, R.; Maiwald, T.; Rho, S.-H.; Bonefas, S.; Raue, A.; Iwamoto, N.; Kienast, A.; Waldow, K.; Meyer, R. et al.; Schilling, M.; Timmer, J.; Klamt, S.; Klingmüller, U.: Disentangling the Complexity of HGF Signaling by Combining Qualitative and Quantitative Modeling. PLoS Computational Biology 11 (4), e1004192 (2015)
  12. Journal Article
    Dolgov, S. V.; Tyrtyshnikov, E. E.: On evolution of solution times for the chemical master equation of the enzymatic futile cycle. Russian Journal of Numerical Analysis and Mathematical Modelling 30 (1), pp. 37 - 42 (2015)
  13. Journal Article
    Dolgov, S.; Khoromskij, B. N.; Litvinenko, A.; Matthies, H. G.: Polynomial Chaos Expansion of Random Coefficients and the Solution of Stochastic Partial Differential Equations in the Tensor Train Format. SIAM/ASA Journal on Uncertainty Quantification 3 (1), pp. 1109 - 1135 (2015)
  14. Journal Article
    Erdrich, P.; Steuer, R.; Klamt, S.: An algorithm for the reduction of genome-scale metabolic network models to meaningful core models. BMC Systems Biology 9, 48 (2015)
  15. Journal Article
    Flassig, R.; Migal, I.; van der Zalm, E.; Rihko-Struckmann, L.; Sundmacher, K.: Rational selection of experimental readout and intervention sites for reducing uncertainties in computational model predictions. BMC Bioinformatics 16, 13 (2015)
  16. Journal Article
    Genzel, Y.: Designing cell lines for viral vaccine production: Where do we stand? Biotechnology Journal 10 (5), pp. 728 - 740 (2015)
  17. Journal Article
    Hädicke, O.; Bettenbrock, K.; Klamt, S.: Enforced ATP futile cycling increases specific productivity and yield of anaerobic lactate production in Escherichia coli. Biotechnology and Bioengineering 112 (10), pp. 2195 - 2199 (2015)
  18. Journal Article
    Hädicke, O.; Klamt, S.: Manipulation of the ATP pool as a tool for metabolic engineering. Biochemical Society Transactions (London) 43 (6), pp. 1140 - 1145 (2015)
  19. Journal Article
    Heldt, F. S.; Kupke, S. Y.; Dorl, S.; Frensing, T.; Reichl, U.: Single-cell analysis and stochastic modelling unveil large cell-to-cell variability in influenza A virus infection. Nature Communications 6, 8938 (2015)
  20. Journal Article
    Heyer, R.; Kohrs, F.; Reichl, U.; Benndorf, D.: Metaproteomics of complex microbial communities in biogas plants. Microbial Biotechnology 8 (5), pp. 749 - 763 (2015)
  21. Journal Article
    Hossain, M.-S.; Uddin, M. M.: Reduce Order Modelling of Power System Models Using Interpolatory Projections Technique. International Journal of Modeling and Optimization 5 (3), pp. 228 - 233 (2015)
  22. Journal Article
    Hylton, R.; Tizzard, G. J.; Threlfall, T. L.; Ellis, A. L.; Coles, S. J.; Seaton, C. C.; Schulze, E.; Lorenz, H.; Seidel-Morgenstern, A.; Stein, M. et al.; Price, S. L.: Are the crystal structures of enantiopure and racemic mandelic acids determined by kinetics or thermodynamics? Journal of the American Chemical Society 137 (34), pp. 11095 - 11104 (2015)
  23. Journal Article
    Karst, F.; Maestri, M.; Freund, H.; Sundmacher, K.: Reduction of Microkinetic Reaction Models for Reactor Optimization exemplified for Hydrogen Production from Methane. Chemical Engineering Journal 281, pp. 981 - 994 (2015)
  24. Journal Article
    Karsten, C. B.; Büttner, F. F. R.; Cajic, S.; Nehlmeier, I.; Neumann, B.; Klippert, A.; Sauermann, U.; Reichl, U.; Gerardy-Schahn, R.; Rapp, E. et al.; Stahl-Hennig, C.; Pöhlmann, S.: Exclusive Decoration of Simian Immunodeficiency Virus Env with High-Mannose Type N-Glycans Is Not Compatible with Mucosal Transmission in Rhesus Macaques. Journal of Virology 89 (22), pp. 11727 - 11733 (2015)
  25. Journal Article
    Khoromskaia, V.; Khoromskij, B. N.: Tensor numerical methods in quantum chemistry: from Hartree–Fock to excitation energies. Physical Chemistry Chemical Physics 17 (47), pp. 31491 - 31509 (2015)
  26. Journal Article
    Kohrs, F.; Wolter, S.; Benndorf, D.; Heyer, R.; Hoffmann, M.; Rapp, E.; Bremges, A.; Sczyrba, A.; Schlüter, A.; Reichl, U.: Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities. Proteomics 15 (20), pp. 3585 - 3589 (2015)
  27. Journal Article
    Lang, N.; Saak, J.; Benner, P.; Ihlenfeldt, S.; Nestmann, S.; Schädlich, K.: Towards the Identification of Heat Induction in Chip Removing Processes via an Optimal Control Approach. Production Engineering: Development & Research 9 (3), pp. 343 - 349 (2015)
  28. Journal Article
    Liang, X.; Li, R.-C.: The Hyperbolic Quadratic Eigenvalue Problem. Forum of Mathematics, Sigma 3, e13 (2015)
  29. Journal Article
    McBride, K.; Sundmacher, K.: Data driven conceptual process design for the hydroformylation of 1-dodecene in a thermomorphic solvent system. Industrial & Engineering Chemistry Research 54 (26), pp. 6761 - 6771 (2015)
  30. Journal Article
    Michailidou, M.; Melas, I.; Messinis, D.; Klamt, S.; Alexopoulos, L.; Kolisis, F.; Loutrari, H.: Network-Based Analysis of Nutraceuticals in Human Hepatocellular Carcinomas Reveals Mechanisms of Chemopreventive Action. CPT: Pharmacometrics & Systems Pharmacology 4 (6), pp. 350 - 361 (2015)
  31. Journal Article
    Mueller, S.; Huard, J.; Waldow, K.; Huang, X.; D'Alessandro, L.; Bohl, S.; Börner, K.; Grimm, D.; Klamt, S.; Klingmüller, U. et al.; Schilling, M.: T160‐phosphorylated CDK2 defines threshold for HGF‐dependent proliferation in primary hepatocytes. Molecular Systems Biology 11, 795 (2015)
  32. Journal Article
    Püttker, S.; Kohrs, F.; Benndorf, D.; Heyer, R.; Rapp, E.; Reichl, U.: Metaproteomics of activated sludge from a wastewater treatment plant- a pilot study. Proteomics 15 (20), pp. 3596 - 3601 (2015)
  33. Journal Article
    Serve, A.; Pieler, M.; Benndorf, D.; Rapp, E.; Wolff, M. W.; Reichl, U.: Comparison of Influenza Virus Particle Purification Using Magnetic Sulfated Cellulose Particles with an Established Centrifugation Method for Analytics. Analytical Chemistry 87 (21), pp. 10708 - 10711 (2015)
  34. Journal Article
    Stoll, M.; Breiten, T.: A low-rank in time approach to PDE-constrained optimization. SIAM Journal on Scientific Computing 37 (1), pp. B1 - B29 (2015)
  35. Journal Article
    Stoll, M.; Bosch, J.: Preconditioning for vector-valued Cahn-Hilliard equations. SIAM Journal on Scientific Computing 37 (5), pp. S216 - S243 (2015)
  36. Journal Article
    Thiele, S.; Cerone, L.; Saez-Rodriguez, J.; Siegel, A.; Guciolowski, C.; Klamt, S.: Extended notions of sign consistency to relate experimental data to signaling and regulatory network topologies. BMC Bioinformatics 16 (1), 345 (2015)
  37. Journal Article
    Varničić, M.; Vidaković-Koch, T.; Sundmacher, K.: Gluconic Acid Synthesis in an Electroenzymatic Reactor. Electrochimica Acta 174, pp. 480 - 487 (2015)
  38. Journal Article
    Yazdi, S.; Durdagi, S.; Naumann, M.; Stein, M.: Structural modeling of the N-terminal signal–receiving domain of IκBα. frontiers in Molecular Biosciences 2, 32 (2015)
  39. Journal Article
    Zhang, Y.; Feng, L.; Li, S.; Benner, P.: An Efficient Output Error Estimation for Model Order Reduction of Parametrized Evolution Equations. SIAM Journal on Scientific Computing 37 (6), pp. B910 - B936 (2015)

Conference Paper (12)

  1. Conference Paper
    Bajcinca, N.; Hofmann, S.; Eisenschmidt, H.; Sundmacher, K.: Generalizing ODE modeling structure for multivariate systems with distributed parameters. 9th IFAC Symposium on Advanced Control of Chemical Processes, ADCHEM 2015, Whistler, Canada, June 07, 2015 - June 10, 2015. IFAC-PapersOnLine 48 (8), pp. 240 - 247 (2015)
  2. Conference Paper
    Dürr, R.; Palis, S.; Kienle, A.: Online parameter identification of facet growth kinetics in crystal morphology population balance models. The 7th World Congress on Particle Technology (WCPT7). Procedia Engineering 102, pp. 1336 - 1345 (2015)
  3. Conference Paper
    Dürr, R.; Müller, T.; Kienle, A.: Efficient DQMOM for Multivariate Population Balance Equations and Application to Virus Replication in Cell Cultures. 8th Vienna International Conference on Mathematical Modelling, Vienna University of Technology, Vienna, Austria, February 18, 2015 - February 20, 2015. IFAC-PapersOnLine 48 (1), pp. 29 - 34 (2015)
  4. Conference Paper
    Dürr, R.; Franz, A.; Kienle, A.: Combination of limited measurement information and multidimensional population balance models. 9th IFAC Symposium on Biological and Medical Systems - BMS 2015 -, Berlin, Germany, August 31, 2015 - September 02, 2015. IFAC-PapersOnLine 48 (20), pp. 261 - 266 (2015)
  5. Conference Paper
    Eaton, J.; Grundel, S.; Gürbüzbalaban, M.; Overton, M. L.: Polynomial Stabilization with Bounds on the Controller Coefficients. 8th IFAC Symposium on Robust Control Design - ROCOND 2015, Bratislava, Slovakia, July 08, 2015 - July 11, 2015. IFAC-PapersOnLine 48 (14), pp. 382 - 387 (2015)
  6. Conference Paper
    Geyyer, R.; Palis, S.; Kienle, A.: Robust control of continuous crystallization processes. 1st IFAC Conference on Modeling, Identification and Control of Nonlinear Sytems MICNON 2015, Sankt Petersburg, Russia, June 24, 2015 - June 26, 2015. IFAC-PapersOnLine 48 (11), pp. 598 - 603 (2015)
  7. Conference Paper
    Khlopov, D.; Mangold, M.: Automatic Model Reduction of Linear Population Balance Models by Proper Orthogonal Decomposition. 8th Vienna International Conference on Mathematical Modelling, Vienna University of Technology, Vienna, Austria, February 18, 2015 - February 20, 2015. IFAC-PapersOnLine 48 (1), pp. 11 - 16 (2015)
  8. Conference Paper
    Kramer, B.; Tüngler, R.; Bettenbrock, K.; Conradi, C.: A compact mathematical model of mandelate racemase production and chaperone overexpression in E. coli. 8th Vienna Interantional Conference on Mathematical Modelling , Vienna, Austria, February 18, 2015 - February 20, 2015. IFAC-PapersOnLine 48 (1), pp. 23 - 28 (2015)
  9. Conference Paper
    Palis, S.; Dreyschultze, C.; Neugebauer, C.; Kienle, A.: Auto-tuning control systems for improved operation of continuous fluidized bed spray granulation processes with external product classification. The 7th World Congress on Particle Technology (WCPT7). Procedia Engineering 102, pp. 133 - 141 (2015)
  10. Conference Paper
    Palis, S.; Bück, A.; Kienle, A.: Entropy-based control of continuous Fluidized bed spray granulation processes. 5th IFAC workshop on Lagrangian and Hamiltonian Methods for Nonlinear Control, Lyon, July 04, 2015 - July 07, 2015. IFAC-PapersOnLine 48 (13), pp. 154 - 157 (2015)
  11. Conference Paper
    Schneider, E.; Mangold, M.: Development and analysis of a mathematical model for a synthetic biological cell. 8th Vienna International Conference on Mathematical Modelling, Vienna University of Technology, Vienna, Austria, February 18, 2015 - February 20, 2015. IFAC-PapersOnLine 48 (1), pp. 447 - 452 (2015)
 
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