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OA Publications at MPI Magdeburg

Open Access Publications at MPI Magdeburg

Journal Article (47)

  1. 1.
    Abeln, M.; Borst, K. M.; Cajic, S.; Thiesler, H.; Kats, E.; Albers, I.; Kuhn, M.; Kaever, V.; Rapp, E.; Münster-Kühnel, A. et al.; Weinhold, B.: Sialylation Is Dispensable for Early Murine Embryonic Development in Vitro. ChemBioChem: A European Journal of Chemical Biology 18 (13), pp. 1305 - 1306 (2017)
  2. 2.
    Ahmad, M. I.; Szyld, D. B.; van Gijzen, M. B.: Preconditioned Multishift BiCG for H2-Optimal Model Reduction. SIAM Journal on Matrix Analysis and Applications 38 (2), pp. 401 - 424 (2017)
  3. 3.
    Aliyev, N.; Benner, P.; Mengi, E.; Schwerdtner, P.; Voigt, M.: Large-Scale Computation of L-Norms by a Greedy Subspace Method. SIAM Journal on Matrix Analysis and Applications 38 (4), pp. 1496 - 1516 (2017)
  4. 4.
    Altmann, R.; Heiland, J.: Simulation of Multibody Systems With Servo Constraints Through Optimal Control. Multibody System Dynamics 40 (1), pp. 75 - 98 (2017)
  5. 5.
    Benner, P.; Denißen, J.; Kohaupt, L.: Trigonometric Spline and Spectral Bounds for the Solution of Linear Time-Periodic Systems. Journal of Applied Mathematics and Computing 54 (1), pp. 127 - 157 (2017)
  6. 6.
    Benner, P.; Damm, T.; Rodriguez Cruz, Y. R.: Dual Pairs of Generalized Lyapunov Inequalities and Balanced Truncation of Stochastic Linear Systems. IEEE Transactions on Automatic Control 62 (2), 7478646, pp. 782 - 791 (2017)
  7. 7.
    Benner, P.; Hossain, M.-S.: Structure Preserving Iterative Methods for Periodic Projected Lyapunov Equations and their Application in Model Reduction of Periodic Descriptor Systems. Numerical Algorithms 76 (4), pp. 881 - 904 (2017)
  8. 8.
    Benner, P.; Yücel, H.: Adaptive Symmetric Interior Penalty Galerkin Method for Boundary Control Problems. SIAM Journal on Numerical Analysis 55 (2), pp. 1101 - 1133 (2017)
  9. 9.
    Bremer, J.; Rätze, K.; Sundmacher, K.: CO2 Methanation: Optimal Start-Up Control of a Fixed-Bed Reactor for Power-To-Gas Applications. AIChE-Journal 63 (1), pp. 23 - 31 (2017)
  10. 10.
    Buchholz, H. K.; Hylton, R. K.; Brandenburg, J. G.; Seidel-Morgenstern, A.; Lorenz, H.; Stein, M.; Price, S. L.: Thermochemistry of racemic and enantiopure molecular crystals for predicting enantiomer separation. Crystal Growth & Design 17 (9), pp. 4676 - 4686 (2017)
  11. 11.
    Chen, J.; Grundel, S.; Yu, T. P. Y.: A Flexible C2 Subdivision Scheme on the Sphere: With Application to Biomembrane Modelling. SIAM Journal on Applied Algebra and Geometry 1 (1), pp. 459 - 483 (2017)
  12. 12.
    Damm, T.; Benner, P.; Hauth, J.: Computing the Stochastic H-Norm by a Newton Iteration. IEEE Control Systems Letters 1 (1), pp. 92 - 97 (2017)
  13. 13.
    Dolgov, S.; Stoll, M.: Low-Rank Solution to an Optimization Problem Constrained by the Navier-Stokes Equations. SIAM Journal on Scientific Computing 39 (1), pp. A255 - A280 (2017)
  14. 14.
    Eaton, J.; Grundel, S.; Gürbüzbalaban, M.; Overton, M. L.: Polynomial Root Radius Optimization with Affine Constraints. Mathematical Programming / A 165 (2), pp. 509 - 528 (2017)
  15. 15.
    Edler, E.; Stein, M.: Probing the druggability of membrane-bound Rab5 by molecular dynamics simulations. Journal of Enzyme Inhibition and Medicinal Chemistry 32 (1), pp. 434 - 443 (2017)
  16. 16.
    Eisenschmidt, H.; Soumaya, M.; Bajcinca, N.; Le Borne, S.; Sundmacher, K.: Estimation of aggregation kernels based on Laurent polynomial approximation. Computers and Chemical Engineering 103, pp. 210 - 217 (2017)
  17. 17.
    El-Sibai, A.; Rihko-Struckmann, L.; Sundmacher, K.: Model-based Optimal Sabatier Reactor Design for Power-to-Gas Applications. Energy Technology 5 (6), pp. 911 - 921 (2017)
  18. 18.
    Gerlach, M.; Abdul Wajid, D.; Hilfert, L.; Edelmann, F. T.; Seidel-Morgenstern, A.; Hamel, C.: Impact of minor amounts of hydroperoxides on rhodium-catalyzed hydroformylation of long-chain olefins. Catalysis Science & Technology 2017 (7), pp. 1465 - 1469 (2017)
  19. 19.
    Grushkovskaya , V. V.; Zuyev, A.: Two-Point Problem for Systems Satisfying the Controllability Condition with Lie Brackets of the Second Order. Journal of Mathematical Sciences 220 (3), pp. 301 - 317 (2017)
  20. 20.
    Guglielmi, N.; Gürbüzbalaban, M.; Mitchell, T.; Overton, M. L.: Approximating the Real Structured Stability Radius with Frobenius Norm Bounded Perturbations. SIAM Journal on Matrix Analysis and Applications 38 (4), pp. 1323 - 1353 (2017)
  21. 21.
    Hädicke, O.; Klamt, S.: EColiCore2: a reference model of the central metabolism of Escherichia coli and the relationships to its genome-scale parent model. Scientific Reports 7, 39647 (2017)
  22. 22.
    Kamp von, A.; Thiele, S.; Hädicke, O.; Klamt, S.: Use of CellNetAnalyzer in biotechnology and metabolic engineering. Journal of Biotechnology 261, pp. 221 - 228 (2017)
  23. 23.
    Kamp von, A.; Klamt, S.: Growth-coupled overproduction is feasible for almost all metabolites in five major production organisms. Nature Communications 8, 15926 (2017)
  24. 24.
    Kerst, K.; Roloff, C.; Medeiros de Souza, L. G.; Bartz, A.; Seidel-Morgenstern, A.; Thévenin, D.; Janiga, G.: CFD-DEM simulations of a fluidized bed crystallizer. Chemical Engineering Science 165, pp. 1 - 13 (2017)
  25. 25.
    Klamt, S.; Regensburger, G.; Gerstl, P.M.; Jungreuthmayer, C.; Schuster, S.; Mahadevan, R.; Zanghellini, J.; Müller, S.: From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints. PLoS Computational Biology 13 (4), e1005409 (2017)
  26. 26.
    Kohls, E.; Stein, M.: Vibrational scaling factors for RH(I) carbonyl compounds in homogeneous cataylsis. Contributions. Section of Natural, Mathematical & Biotechnical Sciences 38 (1), pp. 43 - 56 (2017)
  27. 27.
    Kohls, E.; Stein, M.: The thermochemistry of long chain olefin isomers during hydroformylation. New Journal of Chemistry 41 (15), pp. 7347 - 7355 (2017)
  28. 28.
    Kohrs, F.; Heyer, R.; Bissinger, T.; Kottler, R.; Schallert, K.; Püttker, S.; Behne, A.; Rapp, E.; Benndorf, D.; Reichl, U.: Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community composition. Anaerobe 46, pp. 56 - 68 (2017)
  29. 29.
    Kotelnikova, E. N.; Isakov, A. I.; Lorenz, H.: Non-equimolar discrete compounds in binary chiral systems of organic substances. CrystEngComm 19 (14), pp. 1851 - 1869 (2017)
  30. 30.
    Liu, Y.; McBride, R.; Stoll, M.; Palma, A. S.; Silva, L.; Agravat, S.; Aoki-Kinoshita, K. F.; Campbell, M. P.; Costello, C. E.; Dell, A. et al.; Haslam, S. M.; Karlsson, N. G.; Khoo, K.-H.; Kolarich, D.; Novotny, M. V.; Packer, N. H.; Ranzinger, R.; Rapp, E.; Rudd, P. M.; Struwe, W. B.; Tiemeyer, M.; Wells, L.; York, W. S.; Zaia, J.; Kettner, C.; Paulson, J. C.; Feizi, T.; Smith, D. F.: The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data. Glycobiology 27 (4), pp. 280 - 284 (2017)
  31. 31.
    Natarajan, M.; Faujdar, H.; Mobin, S. M.; Stein, M.; Kaur-Ghumaan, S.: A mononuclear iron carbonyl complex [Fe(μ-bdt)(CO)2(PTA)2] with bulky phosphine ligands: a model for the [FeFe] hydrogenase enzyme active site with an inverted redox potential. Dalton Transactions 46 (30), pp. 10050 - 10056 (2017)
  32. 32.
    Petrenko, A.; Stein, M.: Distal [FeS]-Cluster Coordination in [NiFe]-Hydrogenase Facilitates Intermolecular Electron Transfer. International Journal of Molecular Sciences 18 (1), 100 (2017)
  33. 33.
    Pieler, M.; Heyse, A.; Wolff, M. W.; Reichl, U.: Specific ion effects on the particle size distributions of cell culture–derived influenza A virus particles within the Hofmeister series. Engineering in Life Sciences 17 (5), pp. 470 - 478 (2017)
  34. 34.
    Pralow, A.; Hoffmann, M.; Nguyen-Khuong, T.; Rapp, E.; Reichl, U.: Improvement of the glycoproteomic toolbox with the discovery of a unique C-terminal cleavage specificity of flavastacin for N-glycosylated asparagine. Scientific Reports 7, 11419 (2017)
  35. 35.
    Prigent, S.; Frioux, C.; Dittami, S. M.; Thiele, S.; Larhlimi, A.; Collet, G.; Gutknecht, F.; Got, J.; Eveillard, D.; Bourdon, J. et al.; Plewniak, F.; Tonon, T.; Siegel, A.: Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks. PLoS Computational Biology 13, e1005276 (2017)
  36. 36.
    Qamar, S.; Bibi, S.; Akram, N.; Seidel-Morgenstern, A.: Analysis of Two-Component Non-Equilibrium Model of Linear Reactive Chromatography. Chromatographia 80 (3), pp. 383 - 400 (2017)
  37. 37.
    Ricken, B.; Kolvenbach, B. A.; Bergesch, C.; Benndorf, D.; Kroll, K.; Strnad, H.; Vlcek, C.; Adaixo, R.; Hammes, F.; Shahgaldian, P. et al.; Schäffer, A.; Kohler, H.-P. E.; Corvini , P. F.-X.: FMNH2-dependent monooxygenases initiate catabolism of sulfonamides in Microbacterium sp. strain BR1 subsisting on sulfonamide antibiotics. Scientific Reports 7, 15783 (2017)
  38. 38.
    Rihko-Struckmann, L.; Molnar, M.; Pirwitz, K.; Fachet, M.; McBride, K.; Zinser, A.; Sundmacher, K.: Recovery and Separation of Carbohydrate Derivatives from the Lipid Extracted Alga Dunaliella by Mild Liquefaction. ACS Sustainable Chemistry & Engineering 5 (1), pp. 588 - 595 (2017)
  39. 39.
    Salmas, R. E.; Stein, M.; Yurtsever, M.; Seeman, P.; Erol, I.; Mestanoglu, M.; Durdagi, S.: The signaling pathway of dopamine D2 receptor (D2R) activation using normal mode analysis (NMA) and the construction of pharmacophore models for D2R ligands. Journal of Biomolecular Structure and Dynamics 35 (9), pp. 2040 - 2048 (2017)
  40. 40.
    Schiffer, J.; Hans, C. A.; Kral, T.; Ortega, R.; Raisch, J.: Modelling, Analysis and Experimental Validation of Clock Drift Effects in Low-Inertia Power Systems. IEEE Transactions on Industrial Electronics 64 (7), pp. 5942 - 5951 (2017)
  41. 41.
    Seel, T.; Schauer, T.; Raisch, J.: Monotonic Convergence of Iterative Learning Control Systems with Variable Pass Length. International Journal of Control 90 (3), pp. 393 - 406 (2017)
  42. 42.
    Straube, R.; Shah, M.; Flockerzi, D.; Wolf, D.A.: Trade-off and flexibility in the dynamic regulation of the cullin-RING ubiquitin ligase repertoire. PLoS Computational Biology 13 (11), e1005869 (2017)
  43. 43.
    Tapia, F.; Jordan, I.; Genzel, Y.; Reichl, U.: Efficient and stable production of Modified Vaccinia Ankara virus in two-stage semi-continuous and in continuous stirred tank cultivation systems. PLoS One 12 (8), e0182553 (2017)
  44. 44.
    Wenzel, M.; Rihko-Struckmann, L.; Sundmacher, K.: Thermodynamic Analysis and Optimization of RWGS Processes for Solar Syngas Production from CO2. AIChE-Journal 63 (1), pp. 15 - 22 (2017)
  45. 45.
    Wiedmeyer, V.; Anker, F.; Bartsch, C.; Voigt, A.; John, V.; Sundmacher, K.: Continuous Crystallization in a Helically Coiled Flow Tube: Analysis of Flow Field, Residence Time Behavior, and Crystal Growth. Industrial and Engineering Chemistry Research 56 (13), pp. 3699 - 3712 (2017)
  46. 46.
    Yazdi, S.; Naumann, M.; Stein, M.: Double Phosphorylation-Induced Structural Changes in the Signal-Receiving Domain of IκBα in Complex with NF-κB. Proteins: Structure, Function, and Bioinformatics 85 (1), pp. 17 - 29 (2017)
  47. 47.
    Zhang, J.; Qin, L.; Peng, D.; Zhou, T.; Cheng, H.; Chen, L.; Qi, Z.: COSMO-descriptor based computer-aided ionic liquid design for separation processes: Part II: Task-specific design for extraction processes. Chemical Engineering Science 162, pp. 364 - 374 (2017)

Conference Paper (7)

  1. 48.
    Arun Kumar, S.; Chowdhury, N. R.; Srikant, S.; Raisch, J.: Consensus Analysis of Systems with Time-varying Interactions: An Event-triggered Approach. IFAC 2017 World Congress, Toulouse, France, July 09, 2017 - July 14, 2017. IFAC-PapersOnLine 50 (1), pp. 9349 - 9354 (2017)
  2. 49.
    Benner, P.; Dufrechou, E.; Ezzatti, P.; Remón, A.: Studying Mixed Precision Techniques for the Solution of Algebraic Riccati Equations. In: Book of Abstracts of 2nd Workshop on Power-Aware Computing, Ringberg Castle, pp. 1 - 6. 2nd Workshop on Power-Aware Computing, Ringberg Castle, Ringberg Castle, Germany, July 05, 2017 - July 08, 2017. (2017)
  3. 50.
    Benner, P.; Köhler, M.; Penke, C.: GPU-Accelerated Implementation of the Storage-Efficient QR Decomposition. In: Book of Abstracts of 2nd Workshop on Power-Aware Computing, Ringberg Castle, pp. 1 - 6. 2nd Workshop on Power-Aware Computing, Ringberg Castle, Ringberg Castle, Germany, July 05, 2017 - July 08, 2017. (2017)
 
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