MPG.PuRe Contact at MPI Magdeburg

Kristina Reinhold
Kristina Reinhold
Head Librarian
Phone:+49 391 6110-146

OA Ambassadors at MPI Magdeburg

Dr. Jan Heiland
Dr. Jan Heiland
Team leader
Phone: +49 391 6110 476
Room: S2.13
Jens Bremer, M. Sc.
Jens Bremer, M. Sc.
Phone: +49 391 6110 412
Room: N 3.08

OA Publications at MPI Magdeburg

Open Access Publications at MPI Magdeburg

Journal Article (438)

  1. Journal Article
    Hädicke, O.; Kamp von, A.; Aydogan, T.; Klamt, S.: OptMDFpathway: Identification of metabolic pathways with maximal thermodynamic driving force and its application for analyzing the endogenous CO2 fixation potential of Escherichia coli. PLoS Computational Biology 14 (9), e1006492 (2018)
  2. Journal Article
    Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Temperature-dependent dynamic control of the TCA cycle increases volumetric productivity of itaconic acid production by Escherichia coli. Biotechnology and Bioengineering 115 (1), pp. 156 - 164 (2018)
  3. Journal Article
    Himpe, C.: emgr - The Empirical Gramian Framework. Algorithms 11 (7), 91 (2018)
  4. Journal Article
    Himpe, C.; Leibner, T.; Rave, S.: Hierarchical Approximate Proper Orthogonal Decomposition. SIAM Journal on Scientific Computing 40 (5), pp. A3267 - A3292 (2018)
  5. Journal Article
    Hund, M.; Saak, J.: A Connection between Time Domain Model Order Reduction and Moment Matching for LTI Systems. Mathematical and Computer Modelling of Dynamical Systems 24 (5), pp. 455 - 484 (2018)
  6. Journal Article
    Immerz, C.; Paidar, M.; Papakonstantinou, G.; Bensmann, B.; Bystron, T.; Vidaković-Koch, T.; Bouzek, K.; Sundmacher, K.; Hanke-Rauschenbach, R.: Effect of the MEA design on the performance of PEMWE single cells with different sizes. Journal of Applied Electrochemistry 48 (6), pp. 701 - 711 (2018)
  7. Journal Article
    Jongsma, H.-J.; Mlinarić, P.; Grundel, S.; Benner, P.; Trentelman, H. L.: Model Reduction of Linear Multi-Agent Systems by Clustering and with H2- and H-Error Bounds. Mathematics of Control, Signals, and Systems 30 (1), 6 (2018)
  8. Journal Article
    Klamt, S.; Mahadevan, R.; Hädicke, O.: When do two-stage processes outperform one-stage processes? Biotechnology Journal 13 (2), 1700539 (2018)
  9. Journal Article
    Klamt, S.; Müller, S.; Regensburger, G.; Zanghellini, J.: A mathematical framework for yield (versus rate) optimization in constraint-based modeling and applications in metabolic engineering. Metabolic Engineering 47, pp. 153 - 169 (2018)
  10. Journal Article
    Kotelnikova, E. N.; Isakov, A.; Lorenz, H.: Thermal deformations of crystal structures formed in the systems of malic acid enantiomers and L-valine–L-isoleucine enantiomers. CrystEngComm (20), pp. 2562 - 2572 (2018)
  11. Journal Article
    Kumar, V.; Naumann, M.; Stein, M.: Computational Studies on the Inhibitor Selectivity of Human JAMM Deubiquitinylases Rpn11 and CSN5. Frontiers in Chemistry 6, 480 (2018)
  12. Journal Article
    Kürschner, P.: Balanced Truncation Model Order Reduction in Limited Time Intervals for Large Systems. Advances in Computational Mathematics 44 (6), pp. 1821 - 1844 (2018)
  13. Journal Article
    Kyselova, L.; Kreitmayer, D.; Kremling, A.; Bettenbrock, K.: Type and capacity of glucose transport influences succinate yield in two-stage cultivations. Microbial Cell Factories 17, 132 (2018)
  14. Journal Article
    Liu, X.; Reitsma, J. M.; Mamrosh, J. L.; Zhang, Y.; Straube, R.; Deshaies, R. J.: Cand1-Mediated Adaptive Exchange Mechanism Enables Variation in F-Box Protein Expression. Molecular Cell 69 (5), pp. 773 - 786 (2018)
  15. Journal Article
    Mertens, N.; Kunde, C.; Kienle, A.; Michaels, D.: Monotonic reformulation and bound tightening for global optimization of ideal multi-component distillation columns. Optimization & Engineering 19 (2), pp. 479 - 514 (2018)
  16. Journal Article
    Möginger, U.; Grunewald, S.; Hennig, R.; Kuo, C.-W.; Schirmeister, F.; Voth, H.; Rapp, E.; Khoo, K.-H.; Seeberger, P. H.; Simon, J. C. et al.; Kolarich, D.: Alterations of the Human Skin N- and O-Glycome in Basal Cell Carcinoma and Squamous Cell Carcinoma. Frontiers in Oncology 8, 70 (2018)
  17. Journal Article
    Mueller, I.; Kiedorf, G.; Runne, E.; Pottratz, I.; Seidel-Morgenstern, A.; Hamel, C.: Process Control and Yield Enhancement of the Galacto-Oligosaccharide Formation. Chemie-Ingenieur-Technik 90 (5), pp. 725 - 730 (2018)
  18. Journal Article
    Muth, T.; Kohrs, F.; Heyer, R.; Benndorf, D.; Rapp, E.; Reichl, U.; Martens, L.; Renard, B. Y.: MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the Go. Analytical Chemistry 90, pp. 685 - 689 (2018)
  19. Journal Article
    Neugebauer, C.; Bück, A.; Palis, S.; Mielke, L.; Tsotsas, E.; Kienle, A.: Influence of Thermal Conditions on Particle Properties in Fluidized Bed Layering Granulation. Processes 6 (12), 235 (2018)
  20. Journal Article
    Nikolay, A.; Casthilho, L. R.; Reichl, U.; Genzel, Y.: Propagation of Brazilian Zika virus strains in static and suspension cultures using Vero and BHK cells. Vaccine 36 (28), pp. 3140 - 3145 (2018)
  21. Journal Article
    Nikolay, A.; Léon, A.; Schwamborn, K.; Genzel, Y.; Reichl, U.: Process intensification of EB66 ® cell cultivations leads to high-yield yellow fever and Zika virus production. Applied Microbiology and Biotechnology 102 (20), pp. 8725 - 8737 (2018)
  22. Journal Article
    Nitzschke, A.; Bettenbrock, K.: All three quinone species play distinct roles in ensuring optimal growth under aerobic and fermentative conditions in E. coli K 12. PLoS One 13 (4), 20194699 (2018)
  23. Journal Article
    Pischel, D.; Buchbinder, J.; Sundmacher, K.; Lavrik, I.; Flassig, R.: A guide to automated apoptosis detection: How to make sense of imaging flow cytometry data. PLoS ONE 13 (5), e0197208 (2018)
  24. Journal Article
    Qamar, S.; Kiran, N.; Anwar, T.; Bibi, S.; Seidel-Morgenstern, A.: Theoretical Investigation of Thermal Effects in an Adiabatic Chromatographic Column Using a Lumped Kinetic Model Incorporating Heat Transfer Resistances. Industrial and Engineering Chemistry Research 57 (6), pp. 2287 - 2297 (2018)
  25. Journal Article
    Redmann, M.; Kürschner, P.: An Output Error Bound for Time-Limited Balanced Truncation. Systems & Control Letters 121, pp. 1 - 6 (2018)
  26. Journal Article
    Rehman, A.; Ali, I.; Qamar, S.: Exact Riemann solutions of the Ripa model for flat and non-flat bottom topographies. Results in Physics 8, pp. 104 - 113 (2018)
  27. Journal Article
    Rekis, T.; Be̅rziņš, A.; Sarceviča, I.; Kons, A.; Balodis, M.; Orola, L.; Lorenz, H.; Actiņs, A.: A Maze of Solid Solutions of Pimobendan Enantiomers: An Extraordinary Case of Polymorph and Solvate Diversity. Crystal Growth & Design 18 (1), pp. 264 - 273 (2018)
  28. Journal Article
    Rexer, T.; Schildbach, A.; Klapproth, J.; Schierhorn, A.; Mahour, R.; Pietzsch, M.; Rapp, E.; Reichl, U.: One pot synthesis of GDP-mannose by a multi-enzyme cascade for enzymatic assembly of lipid-linked oligosaccharides. Biotechnology and Bioengineering 115 (1), pp. 192 - 205 (2018)
  29. Journal Article
    Rey-Jurado, E.; Tapia, F.; Muñoz-Durango, N.; Lay, M.K.; Carreño, L. J.; Riedel, C. A.; Bueno, S. M.; Genzel, Y.; Kalergis, A. M.: Assessing the Importance of Domestic Vaccine Manufacturing Centers: An Overview of Immunization Programs, Vaccine Manufacture, and Distribution. Frontiers in immunology 9, 26 (2018)
  30. Journal Article
    Saleem, M. R.; Ali, I.; Qamar, S.: Application of discontinuous Galerkin method for solving a compressible five-equation two-phase flow model. Results in Physics 8, pp. 379 - 390 (2018)
  31. Journal Article
    Salmas, R. E.; Is, Y. S.; Durdagi, S.; Stein, M.; Yurtsever, M.: A QM protein–ligand investigation of antipsychotic drugs with the dopamine D2 Receptor (D2R). Journal of Biomolecular Structure and Dynamics 36 (10), pp. 2668 - 2677 (2018)
  32. Journal Article
    Salmas, R. E.; Seeman, P.; Stein, M.; Durdagi, S.: Structural Investigation of the Dopamine-2 Receptor Agonist Bromocriptine Binding to Dimeric D2HighR and D2LowR States. Journal of Chemical Information and Modeling 58 (4), pp. 826 - 836 (2018)
  33. Journal Article
    Schack, D.; Sundmacher, K.: Techno‐ökonomische Optimierung des Produktionsnetzwerkes für die Synthese von Ameisensäure aus erneuerbaren Ressourcen. Chemie-Ingenieur-Technik 90 (1-2), pp. 256 - 266 (2018)
  34. Journal Article
    Schneider, E.; Mangold , M.: Modular assembling process of an in-silico protocell. Biosystems 165 (2018)
  35. Journal Article
    Stillfjord, T.: Singular Value Decay of Operator-Valued Differential Lyapunov and Riccati Equations. SIAM Journal on Control and Optimization 56 (5), pp. 3598 - 3618 (2018)
  36. Journal Article
    Triemer, S.; Gilmore, K.; Vu, T. G.; Seeberger, P. H.; Seidel-Morgenstern, A.: Literally green chemical synthesis of artemisinin from plant extracts. Angewandte Chemie International Edition 57 (19), pp. 5525 - 5528 (2018)
  37. Journal Article
    Vazquez-Ramirez, D.; Genzel, Y.; Jordan, I.; Sandig, V.; Reichl, U.: High-cell-density cultivations to increase MVA virus production. Vaccine 36 (22), pp. 3124 - 3133 (2018)
  38. Journal Article
    Venayak, N.; Kamp von, A.; Klamt, S.; Mahadevan, R.: MoVE identifies metabolic valves to switch between phenotypic states. Nature Communications 9, 5332 (2018)
  39. Journal Article
    Wang, M.; Wölfer, C.; Otrin, L.; Ivanov, I.; Vidaković-Koch, T.; Sundmacher, K.: Transmembrane NADH oxidation with Tetracyanoquinodimethane. Langmuir 34 (19) (2018)
  40. Journal Article
    Wasik, M.; Eichwald, L.; Genzel, Y.; Reichl, U.: Cell culture-based production of defective interfering particles for influenza antiviral therapy. Applied Microbiology and Biotechnology 102 (3), pp. 1167 - 1177 (2018)
  41. Journal Article
    Wenzel, M.; Rihko-Struckmann, L.; Sundmacher, K.: Continuous production of CO from CO2 by RWGS chemical looping in fixed and fluidized bed reactors. Chemical Engineering Journal 336, pp. 278 - 296 (2018)
  42. Journal Article
    Yuan, L.; Lorenz, H.: Solvate Formation of Bis(demethoxy)curcumin: Screening and Characterization. Crystals 8 (11), 407 (2018)
  43. Journal Article
    Yücel, H.; Stoll, M.; Benner, P.: Adaptive Discontinuous Galerkin Approximation of Optimal Control Problems Governed by Transient Convection-Diffusion Equations. Electronic Transactions on Numerical Analysis 48, pp. 407 - 434 (2018)
  44. Journal Article
    Zähringer, K.; Wagner, L.-M.; Thévenin, D.; Siegmund, P.; Sundmacher, K.: Particle-image-velocimetry measurements in organic liquid multiphase systems for an optimal reactor design and operation. Journal of Visualization 21 (1), pp. 5 - 17 (2018)
  45. Journal Article
    Abeln, M.; Borst, K. M.; Cajic, S.; Thiesler, H.; Kats, E.; Albers, I.; Kuhn, M.; Kaever, V.; Rapp, E.; Münster-Kühnel, A. et al.; Weinhold, B.: Sialylation Is Dispensable for Early Murine Embryonic Development in Vitro. ChemBioChem 18 (13), pp. 1305 - 1306 (2017)
  46. Journal Article
    Ahmad, M. I.; Benner, P.; Goyal, P. K.: Krylov Subspace-Based Model Reduction for a Class of Bilinear Descriptor Systems. Journal of Computational and Applied Mathematics 315, pp. 303 - 318 (2017)
  47. Journal Article
    Ahmad, M. I.; Benner, P.; Goyal, P. K.; Heiland, J.: Moment-Matching Based Model Reduction for Navier–Stokes Type Quadratic-Bilinear Descriptor Systems. Zeitschrift für Angewandte Mathematik und Mechanik 97 (10), pp. 1252 - 1267 (2017)
  48. Journal Article
    Ahmad, M. I.; Szyld, D. B.; van Gijzen, M. B.: Preconditioned Multishift BiCG for H2-Optimal Model Reduction. SIAM Journal on Matrix Analysis and Applications 38 (2), pp. 401 - 424 (2017)
  49. Journal Article
    Ahmed, M.; Zainab, Q. U. A.; Qamar, S.: Analysis of One-Dimensional Advection–Diffusion Model with Variable Coefficients Describing Solute Transport in a Porous medium. Transport in Porous Media 118 (3), pp. 327 - 344 (2017)
  50. Journal Article
    Aliyev, N.; Benner, P.; Mengi, E.; Schwerdtner, P.; Voigt, M.: Large-Scale Computation of L-Norms by a Greedy Subspace Method. SIAM Journal on Matrix Analysis and Applications 38 (4), pp. 1496 - 1516 (2017)
 
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