Publications of Pavlos Stephanos Bekiaris

Kutscha, R.; Tomin, T.; Birner-Gruenberger, R.; Bekiaris, P. S.; Klamt, S.; Pflügl, S.: Efficiency of acetate-based isopropanol synthesis in Escherichia coli W is controlled by ATP demand. Biotechnology for Biofuels and Bioproducts 17, 110 (2024)

Bekiaris, P. S.; Klamt, S.: Network-wide thermodynamic constraints shape NAD(P)H cofactor specificity of biochemical reactions. Nature Communications 14, 4660 (2023)

Schneider, P.; Bekiaris, P. S.; Kamp von, A.; Klamt, S.: StrainDesign: a Comprehensive Python Package for Computational Design of Metabolic Networks. Bioinformatics 38 (21), pp. 4981 - 4983 (2022)

Thiele, S.; Kamp von, A.; Bekiaris, P. S.; Schneider, P.; Klamt, S.: CNApy: a CellNetAnalyzer GUI in Python for Analyzing and Designing Metabolic Networks. Bioinformatics 38 (5), pp. 1467 - 1469 (2022)

Bekiaris, P. S.; Klamt, S.: Designing microbial communities to maximize the thermodynamic driving force for the production of chemicals. PLoS Computational Biology 17 (6), e1009093 (2021)

Bekiaris, P. S.; Klamt, S.: Automatic construction of metabolic models with enzyme constraints. BMC Bioinformatics 21, 19 (2020)

Bekiaris, P. S.: Entwicklung neuer Methoden zur Integration thermodynamischer und enzymatischer Nebenbedingungen in der constraint-basierten metabolischen Modellierung. Dissertation, Otto-von-Guericke-Universität, Magdeburg (2024)