IMPRS Publications

2016

Journal Article

Benner, P.; Saak, J.; Uddin, M. M.: Balancing Based Model Reduction for Structured Index-2 Unstable Descriptor Systems with Application to Flow Control. Numerical Algebra, Control and Optimization 6 (1), pp. 1 - 20 (2016)

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Journal Article

Benner, P.; Saak, J.; Uddin, M. M.: Structure Preserving Model Order Reduction of Large Sparse Second-Order Index-1 Systems and Application to a Mechatronics Model. Mathematical and Computer Modelling of Dynamical Systems 22 (6), pp. 509 - 523 (2016)

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publisher-version

Journal Article

Börsch, A.; Schaber, J.: The role of time delay in adaptive cellular negative feedback systems. Journal of Theoretical Biology 398, pp. 64 - 73 (2016)

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Journal Article

Bück, A.; Dürr, R.; Schmidt, M.; Tsotsas, E.: Model predictive control of continuous layering granulation in fluidised beds with internal product classification. Journal of Process Control 45, pp. 65 - 75 (2016)

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Journal Article

Dunker, .; Roloff, C.; Grassmann , A.: Interferometric laser imaging for in-flight cloud droplet sizing. Measurement Science and Technology 27 (12), 124004 (2016)

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Journal Article

Eshghinejadfard, A.; Abdelsamie, A.; Janiga, G.; Thévenin, D.: Direct-forcing immersed boundary lattice Boltzmann simulation of particle/fluid interactions for spherical and non-spherical particles. Particuology 25, pp. 93 - 103 (2016)

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Journal Article

Eshghinejadfard, A.; Daróczy, L.; Janiga, G.; Thévenin, D.: Calculation of the permeability in porous media using the lattice Boltzmann method. International Journal of Heat and Fluid Flow 62, Part A, pp. 93 - 103 (2016)

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Journal Article

Eshghinejadfard, A.; Thévenin, D.: Numerical simulation of heat transfer in particulate flows using a thermal immersed boundary lattice Boltzmann method. International Journal of Heat and Fluid Flow 60, pp. 31 - 46 (2016)

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Journal Article

Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-Based metabolic engineering enables high yield itaconic acid production by Escherichia coli. Metabolic Engineering 38, pp. 29 - 37 (2016)

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Journal Article

Kienle, A.; Palis, S.; Mangold, M.; Dürr, R.: Modeling and simulation of particulate processes. Electronic Modeling 38 (5), pp. 23 - 33 (2016)

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Journal Article

Koch, S.; Benndorf, D.; Fronk, K.; Reichl, U.; Klamt, S.: Predicting compositions of microbial communities from stoichiometric models with applications for the biogas process. Biotechnology for Biofuels 9, 17 (2016)

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publisher-version

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Kollarovic , G.; Studencka , M.; Ivanova , L.; Lauenstein , C.; Heinze , K.; Lapytsko, A.; Rastgou Talemi, S.; Figueiredo , . S.; Schaber, J.: To senesce or not to senesce: how primary human fibroblasts decide their cell fate after DNA damage. Aging 8 (1), pp. 158 - 176 (2016)

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Journal Article

Lapytsko, A.; Schaber, J.: How time delay and network design shape response patterns in biochemical negative feedback systems. BMC Systems Biology 10, 82 (2016)

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Journal Article

Rastgou Talemi, S.; Tiger, .-F.; Andersson, M.; Babazadeh, R.; Welkenhuysen, N.; Klipp, E.; Hohmann, S.; Schaber, J.: Systems Level Analysis of the Yeast Osmo-Stat. Scientific Reports 6, 30950 (2016)

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Journal Article

Santos da Silva, F.; Seidel-Morgenstern, A.: Evaluation of center-cut separations applying simulated moving bed chromatography with 8 zones. Journal of Chromatography A 1456, pp. 123 - 136 (2016)

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Journal Article

Schaap, P.; Barrantes Bustinza, I. W.; Minx, P.; Sasaki, N.; Anderson, R. W.; Bénard, M.; Biggar , K. K.; Buchler , N. E.; Bundschuh , R.; Chen, X. et al.; Fronick, C.; Fulton , L.; Golderer, G.; Jahn, N.; Knoop, V.; Landweber, L. F.; Maric , C.; Miller, D.; Noegel , A. A.; Peace, R.; Pierron, G.; Sasaki , T.; Schallenberg-Rüdinger , M.; Schleicher, M.; Singh, R.; Spaller , T.; Storey , K. B.; Suzuki , T.; Tomlinson, C.; Tyson, J. J.; Warren , W. C.; Werner , E. R.; Werner-Felmayer, G.; Wilson, R. K.; Winckler , T.; M. Gott , .; Glöckner , G.; Marwan, W.: The Physarum polycephalum Genome Reveals Extensive Use of Prokaryotic Two-Component and Metazoan-Type Tyrosine Kinase Signaling. Genome Biology and Evolution 8 (1), pp. 109 - 125 (2016)

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Journal Article

Streif, S.; Kim, K.-K. K.; Rumschinski, P.; Kishida, M.; Shen, D. E.; Findeisen, R.; Braatz, R. D.: Robustness analysis, prediction, and estimation for uncertain biochemical networks: An overview. Journal of Process Control 42, pp. 14 - 34 (2016)

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Journal Article

Tapia, F.; Vázquez-Ramirez, D.; Genzel, Y.; Reichl, U.: Bioreactors for high cell density and continuous multi-stage cultivations: options for process intensification in cell culture-based viral vaccine production. Applied Microbiology and Biotechnology 100 (5), pp. 2121 - 2132 (2016)

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Temmel, E.; Eicke, M.; Lorenz, H.; Seidel-Morgenstern, A.: A Short-Cut Method for the Quantification of Crystallization Kinetics. 2. Experimental Application. Crystal Growth & Design 16 (12), pp. 6756 - 6768 (2016)

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post-print

Journal Article

Temmel, E.; Eisenschmidt, H.; Lorenz, H.; Sundmacher, K.; Seidel-Morgenstern, A.: A Short-Cut Method for the Quantification of Crystallization Kinetics. 1. Method Development. Crystal Growth & Design 16 (12), pp. 6743 - 6755 (2016)

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post-print

Journal Article

Wang, W.; Voigt, A.; Sundmacher, K.: The interaction of protein-coated bionanoparticles and surface receptors reevaluated: how important is the number of bonds? Soft Matter 12 (30), pp. 6451 - 6462 (2016)

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Journal Article

Wang, W.; Voigt, A.; Wolff, M. W.; Reichl, U.; Sundmacher, K.: Binding kinetics and multi-bond: Finding correlations by synthesizing interactions between ligand-coated bionanoparticles and receptor surfaces. Analytical Biochemistry 505, pp. 8 - 17 (2016)

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Journal Article

Yu, H.; Janiga, G.; Thévenin, D.: Computational Fluid Dynamics‐Based Design Optimization Method for Archimedes Screw Blood Pumps. International Journal of Artificial Organs 40 (4), pp. 341 - 352 (2016)

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Journal Article

Zhou, T.; Wang, J.; McBride, K.; Sundmacher, K.: Optimal design of solvents for extractive reaction processes. AIChE-Journal 62 (9), pp. 3238 - 3249 (2016)

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2015

Journal Article

Janiga , G.; Daróczy, L.; Berg, P.; Thévenin, D.; Skalej, M.; Beuing, O.: An automatic CFD-based flow diverter optimization principle for patient-specific intracranial aneurysms. Journal of Biomechanics 48 (14), pp. 3846 - 3852 (2015)

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Journal Article

Benner, P.; Breiten, T.: Two-Sided Projection Methods for Nonlinear Model Order Reduction. SIAM Journal on Scientific Computing 37 (2), pp. B239 - B260 (2015)

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publisher-version

Journal Article

Benner, P.; Onwunta, A.; Stoll, M.: Low-Rank Solution of Unsteady Diffusion Equations with Stochastic Coefficients. SIAM/ASA Journal on Uncertainty Quantification 3 (1), pp. 622 - 649 (2015)

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publisher-version

Journal Article

Berg, P.; Roloff, C.; Beuing, O.; Voss, S.; Sugiyama, S.-I.; Aristokleous, N.; Anayiotos, A. S.; Ashton, N.; Revell, A.; Bressloff, N. W. et al.; Brown, A. G.; Chung , B. J.; Cebral, J. R.; Copelli, G.; Fu, W.; Qiao, A.; Geers, A. J.; Hodis, S.; Dragomir-Daescu, D.; Bora Suzen, Y.; Nordahl, E.; Owais Khan, M.; Valen-Sendstad, .; Steinman, D. A.; Kono, K.; Menon, P. G.; Albal, P. G.; Mierka, O.; Münster, R.; Morales , H. G.; Bonnefous, O.; Osman, J.; Goubergrits, L.; Pallares, J.; Cito, S.; Passalacqua, A.; Piskin, S.; Pekkan, K.; Ramalho, S.; Marques, N.; Sanchi, S.; Schumacher, K. R.; Sturgeon, J.; Švihlová , H.; Hron, J.; Usera, G.; Mendina, M.; Xiang, J.; Meng, H.: The Computational Fluid Dynamics Rupture Challenge 2013 - Phase II: Variability of Hemodynamic Simulations in Two Intracranial Aneurysms. Journal of Biomechanical Engineering 137 (12), 121008 (2015)

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Journal Article

Bosch, J.; Stoll, M.: A fractional inpainting model based on the vector-valued Cahn–Hilliard equation. SIAM Journal on Imaging Sciences 8 (4), pp. 2352 - 2382 (2015)

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publisher-version

Journal Article

Do Thi, Q. N.; Varničić, M.; Flassig, R.; Vidaković-Koch, T.; Sundmacher, K.: Dynamic and Steady State 1-D Model of Mediated Electron Transfer in a Porous Enzymatic Electrode. Bioelectrochemistry 106 (Part A), pp. 3 - 13 (2015)

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Journal Article

Glöckner , H.; Hagemeier, T.; Müller, .; Roloff, C.; Thévenin, D.; Tomas, J.: Beschleunigter Sinkprozess fester Partikel bei laminarer und turbulenter Umströmung. Chemie-Ingenieur-Technik 87 (5), pp. 644 - 655 (2015)

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Journal Article

Hagemeier, T.; Roloff, C.; Bück, A.; Tsotsas, E.: Estimation of particle dynamics in 2-D fluidized beds using particle tracking velocimetry. Particuology 22, pp. 39 - 51 (2015)

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Journal Article

Hagemeier, T.; Roloff, C.; Bück, A.; Tsotsas, E.: Estimation of particle dynamics in 2-D fluidized beds using particle tracking velocimetry. Particuology 22, pp. 39 - 51 (2015)

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Journal Article

Hossain, M.-S.; Uddin, M. M.: Reduce Order Modelling of Power System Models Using Interpolatory Projections Technique. International Journal of Modeling and Optimization 5 (3), pp. 228 - 233 (2015)

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publisher-version

Journal Article

Hylton, R.; Tizzard, G. J.; Threlfall, T. L.; Ellis, A. L.; Coles, S. J.; Seaton, C. C.; Schulze, E.; Lorenz, H.; Seidel-Morgenstern, A.; Stein, M. et al.; Price, S. L.: Are the crystal structures of enantiopure and racemic mandelic acids determined by kinetics or thermodynamics? Journal of the American Chemical Society 137 (34), pp. 11095 - 11104 (2015)

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publisher-version

Journal Article

Karst, F.; Maestri, M.; Freund, H.; Sundmacher, K.: Reduction of Microkinetic Reaction Models for Reactor Optimization exemplified for Hydrogen Production from Methane. Chemical Engineering Journal 281, pp. 981 - 994 (2015)

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publisher-version

Journal Article

Langermann von, J.; Temmel, E.; Seidel-Morgenstern, A.; Lorenz, H.: Solid Phase Behavior in the Chiral Systems of Various 2-Hydroxy-2-phenylacetic Acid (Mandelic Acid) Derivatives. Journal of Chemical and Engineering Data 60 (3), pp. 721 - 728 (2015)

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Journal Article

Lapytsko, A.; Kollarovic, G.; Ivanova, L.; Studencka, M.; Schaber, J.: FoCo: a simple and robust quantification algorithm of nuclear foci. BMC Bioinformatics 16 (1), 392 (2015)

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Journal Article

Mann, H.; Mueller , P.; Hagemeier, T.; Roloff, C.; Thévenin, D.; Tomas, J.: Analytical description of the unsteady settling of spherical particles in Stokes and Newton regimes. Granular Matter 17 (5), pp. 629 - 644 (2015)

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Journal Article

Na, Y.; Zenith, F.; Krewer, U.: Increasing Fuel Efficiency of Direct Methanol Fuel Cell Systems with Feedforward Control of the Operating Concentration. Energies 8 (9), pp. 10409 - 10429 (2015)

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Journal Article

Rastgou Talemi, S.; Kollarovic, G.; Lapytsko, A.; Schaber, J.: Development of a robust DNA damage model including persistent telomere-associated damage with application to secondary cancer risk assessment. Scientific Reports 5, 13540 (2015)

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Journal Article

Rätzel, V.; Marwan, W.: Gene expression kinetics in individual plasmodial cells reveal alternative programs of differential regulation during commitment and differentiation. Development Growth & Differentiation 57 (5), pp. 408 - 420 (2015)

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Journal Article

Song, Z.; Zhou, T.; Zhang, J.; Cheng , H.; Chen , L.; Qi , Z.: Screening of ionic liquids for solvent-sensitive extraction –with deep desulfurization as an example. Chemical Engineering Science 129, pp. 69 - 77 (2015)

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Journal Article

Stoll, M.; Bosch, J.: Preconditioning for vector-valued Cahn-Hilliard equations. SIAM Journal on Scientific Computing 37 (5), pp. S216 - S243 (2015)

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publisher-version

Journal Article

Zhou, T.; Lyu, Z.; Qi, Z.; Sundmacher, K.: Robust design of optimal solvents for chemical reactions − A combined experimental and computational strategy. Chemical Engineering Science 137, pp. 613 - 625 (2015)

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Journal Article

Zhou, T.; McBride, K.; Zhang, X.; Qi, Z.; Sundmacher, K.: Integrated solvent and process design exemplified for a Diels–Alder reaction. AIChE Journal 61 (1), pp. 147 - 158 (2015)

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2014

Journal Article

Ballerstein, M.; Michaels, D.: Extended formulations for convex envelopes. Journal of Global Optimization 60 (2), pp. 217 - 238 (2014)

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Journal Article

Benner, P.; Breiten, T.: Rational Interpolation Methods for Symmetric Sylvester Equations. Electronic Transactions on Numerical Analysis 42, pp. 147 - 164 (2014)

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External

Journal Article

Benner, P.; Voigt, M.: A Structured Pseudospectral Method for H_∞-Norm Computation of Large-Scale Descriptor Systems. Mathematics of Control, Signals, and Systems 26 (2), pp. 303 - 338 (2014)

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Journal Article

Berg, P.; Stucht, D.; Janiga, G.; Beuing, O.; Speck, O.: Cerebral Blood Flow in a Healthy Circle of Willis and Two Intracranial Aneurysms: Computational Fluid Dynamics Versus Four-Dimensional Phase-Contrast Magnetic Resonance Imaging. Journal of Biomechanical Engineering-Transactions of the American Society of the Mechanical Engineers 136 (4) (2014)

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Journal Article (373)