Publications of Ronny Straube
All genres
Journal Article (25)
2018
Journal Article
, , , , Straube, R., & (2018)Cand1-Mediated Adaptive Exchange Mechanism Enables Variation in F-Box Protein ExpressionMolecular Cell, 69 (5), 773–786doi: 10.1016/j.molcel.2018.01.038.
2017
Journal Article
Straube, R. (2017)Analysis of network motifs in cellular regulation: Structural similarities, input–output relations and signal integrationBiosystems, 162, 2015–232doi: 10.1016/j.biosystems.2017.10.012.
Journal Article
Straube, R., , Flockerzi, D., & (2017)Trade-off and flexibility in the dynamic regulation of the cullin-RING ubiquitin ligase repertoirePLoS Computational Biology, 13 (11), e1005869doi: 10.1371/journal.pcbi.1005869.
Journal Article
Zander, D., , Straube, R., & Bettenbrock, K. (2017)Bistability and Nonmonotonic Induction of the lac Operon in the Natural Lactose Uptake SystemBiophysical Journal, 112 (9), 1984–1996doi: 10.1016/j.bpj.2017.03.038.
2015
Journal Article
Straube, R. (2015)Analysis of Substrate Competition in Regulatory Network Motifs: Stimulus-Response Curves, Thresholds and Ultrasensitivity.Journal of Theoretical Biology, 380, 74–82doi: 10.1016/j.jtbi.2015.05.018.
2014
Journal Article
Straube, R. (2014)Reciprocal Regulation as a Source of Ultrasensitivity in Two-Component Systems with a Bifunctional Sensor KinasePLoS Computational Biology, 10 (5), e1003614doi: 10.1371/journal.pcbi.1003614.
2013
Journal Article
Straube, R. (2013)Sensitivity and Robustness in Covalent Modification Cycles with a Bifunctional Converter EnzymeBiophysical Journal, 105 (8), 1925–1933doi: 10.1016/j.bpj.2013.09.010.
Journal Article
Straube, R. & Conradi, C. (2013)Reciprocal Enzyme Regulation as a Source of Bistability in Covalent Modification CyclesJournal of Theoretical Biology, 330, 56–74doi: 10.1016/j.jtbi.2013.04.002.
2012
Journal Article
Pandey, R., Flockerzi, D., , & Straube, R. (2012)An extended model for the repression of photosynthesis genes by the AppA/PpsR system in Rhodobacter sphaeroidesFEBS Journal, 279 (18), 3449–3461doi: 10.1111/j.1742-4658.2012.08520.X.
Journal Article
Straube, R. (2012)Comment on "Load-induced modulation of signal transduction networks": Reconciling ultrasensitivity with bifunctionality?Science Signaling, 5 (205), Ic1doi: 10.1126/scisignal.2002699.
2011
Journal Article
Pandey, R., Flockerzi, D., , & Straube, R. (2011)Modeling the Light- and Redox-Dependent Interaction of PpsR/AppA in Rhodobacter sphaeroidesBiophysical Journal, 100 (10), 2347–2355doi: 10.1016/j.bpj.2011.04.017.
Journal Article
, , Straube, R., & (2011)Brownian diffusion of ion channels in different membrane patch geometriesPhysical review E, 83 (2), 021919doi: 10.1103/PhysRevE.83.021919.
2010
Journal Article
, , & Straube, R. (2010)An Asymptotic Analysis of the Mean First Passage Time for Narrow Escape Problems: Part II: The SphereSIAM Multiscale Modeling and Simulation, 8 (3), 836–870doi: 10.1137/100782620.
Journal Article
Straube, R. & (2010)Diffusive coupling can discriminate between similar reaction mechanisms in an allosteric enzyme systemBMC Systems Biology, 4, 165doi: 10.1186/1752-0509-4-165.
Journal Article
Straube, R., , , & (2010)Inward Rotating Spiral Waves in GlycolysisBiophysical Journal, 99 (1), L4–L6doi: 10.1016/j.bpj.2010.04.018.
2009
Journal Article
, Straube, R., & (2009)Diffusion on a Sphere with Localized Traps: Mean First Passage Time, Eigenvalue Asymptotics, and Fekete PointsSIAM Journal on Applied Mathematics, 70 (1), 302–332doi: 10.1137/080733280.
Journal Article
Straube, R. & (2009)Investigating the effects of molecular crowding on Ca2+ Diffusion using a particle-based simulation modelChaos, 19 (3), 037110doi: 10.1063/1.3207820.
Journal Article
Straube, R. & (2009)An asymptotic analysis of intracellular signaling gradients arising from multiple small compartmentsSIAM Journal on Applied Mathematics, 70 (1), 248–269doi: 10.1137/080733401.
2008
Journal Article
, , , , & Straube, R. (2008)Spatial Desynchronization of Glycolytic Waves as Revealed by Karhunen−Loeve AnalysisJournal of Physical Chemistry B, 112 (45), 14334–14341doi: 10.1021/jp805087m.
Journal Article
Klamt, S., Grammel, H., Straube, R., , & Gilles, E. D. (2008)Modeling the electron transport chain of purple non-sulfur bacteriaMolecular Systems Biology, 4, 156doi: 10.1038/msb4100191.