Publications of Katrin Kolczyk

Kolczyk, K. & Conradi, C. (2016)Challenges in horizontal model integrationBMC Systems Biology, (10), 28doi: 10.1186/s12918-016-0266-3.

Kolczyk, K., Samaga, R., Conzelmann, H., Mirschel, S., & Conradi, C. (2012)The Process-Interaction-Model: a common representation of rule-based and logical models allows studying signal transduction on different levels of detailBMC Bioinformatics, 13, 251doi: 10.1186/1471-2105-13-251.

Mirschel, S., Steinmetz, K., Rempel, M., Ginkel, M., & Gilles, E. D. (2009)ProMoT: Modular Modeling for Systems BiologyBioinformatics, 25 (5), 687–689doi: 10.1093/bioinformatics/btp029.

Mirschel, S., Steinmetz, K., & Kremling, A. (2009)Two different approaches for modeling biochemical reaction networks with ProMoTIn: Proceedings / MATHMOD 09: 6th Vienna Conference on Mathematical Modelling, 2322–2330.

Steinmetz, K.ProMoT: A tool for structured and modular modelingPresented at: ZBIT-ColloquiumUniversity of Tübingen, Centre for Bioinformatics, Germany, January 30, 2009.

Kolczyk, K., Mirschel, S., Rempel, M., & Gilles, E. D.Modular Modeling with ProMoT in Systems BiologyPresented at: German Conference on BioinformaticsHalle (Saale), Germany, September 28, 2009.

Mirschel, S., Steinmetz, K., Rempel, M., & Gilles, E. D.Modular modeling with ProMoTPresented at: German Symposium On Systems Biology 2009Heidelberg, Germany, May 12, 2009.

Rempel, M., Mirschel, S., Steinmetz, K., & Gilles, E. D.Model Integration of Modular Models using PromotPresented at: German Symposium on Systems Biology 2009Heidelberg, May 12, 2009.

Steinmetz, K., Mirschel, S., Rempel, M., Ginkel, M., & Gilles, E. D.Structured and modular modeling with ProMoTPresented at: 1st FORSYS SymposiumBerlin, Germany, June 19, 2008.

Steinmetz, K., Samaga, R., Ginkel, M., & Gilles, E. D.User support in visual editing for signaling and regulatory networks in ProMoTPresented at: Conference on Systems Biology of Mammalian Cells (SBMC08)Dresden, Germany, May 22, 2008.