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Journal Article (13)

  1. 1.
    Journal Article
    Scoma, A.; Heyer, R.; Rifai, R.; Dandyk, C.; Marshall, I.; Kerckhof, F.-M.; Marietou, A.; Boshker, H. T. S.; Meysman, F. J. R.; Malmos, K. G. et al.; Vosegaard, T.; Vermeir, P.; Banat, I. M.; Benndorf, D.; Boon, N.: Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities. The ISME Journal 13 (4), pp. 1004 - 1018 (2019)
  2. 2.
    Journal Article
    Thorn, C.E.; Bergesch , C.; Joyce, A.; Sambrano, G.; McDonnell, K.; Brennan, F.; Heyer, R.; Benndorf, D.; Abram, F.: A robust, cost-effective method for DNA, RNA and protein co-extraction from soil, other complex microbiomes, and pure cultures. Molecular Ecology Resources 19 (2), pp. 439 - 455 (2019)
  3. 3.
    Journal Article
    Muth, T.; Kohrs, F.; Heyer, R.; Benndorf, D.; Rapp, E.; Reichl, U.; Martens, L.; Renard, B. Y.: MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the Go. Analytical Chemistry 90, pp. 685 - 689 (2018)
  4. 4.
    Journal Article
    Wenzel, L.; Heyer, R.; Schallert, K.; Löser, L.; Wünschiers, R.; Reichl, U.; Benndorf, D.: SDS-PAGE fractionation to increase metaproteomic insight into the taxonomic and functional composition of microbial communities for biogas plant samples. Engineering in Life Sciences 18 (7), pp. 498 - 509 (2018)
  5. 5.
    Journal Article
    Heyer, R.; Schallert, K.; Zoun, R.; Becher, B.; Saake, G.; Benndorf, D.: Challenges and perspectives of metaproteomic data analysis. Journal of Biotechnology 261, pp. 24 - 36 (2017)
  6. 6.
    Journal Article
    Kohrs, F.; Heyer, R.; Bissinger, T.; Kottler, R.; Schallert, K.; Püttker, S.; Behne, A.; Rapp, E.; Benndorf, D.; Reichl, U.: Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community composition. Anaerobe 46, pp. 56 - 68 (2017)
  7. 7.
    Journal Article
    Heyer, R.; Benndorf, D.; Kohrs, F.; De Vrieze, J.; Boon, N.; Hoffmann, M.; Rapp, E.; Schlüter, A.; Sczyrba, A.; Reichl, U.: Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type. Biotechnology for Biofuels 9 (9), 155 (2016)
  8. 8.
    Journal Article
    Heyer, R.; Kohrs, F.; Reichl, U.; Benndorf, D.: Metaproteomics of complex microbial communities in biogas plants. Microbial Biotechnology 8 (5), pp. 749 - 763 (2015)
  9. 9.
    Journal Article
    Muth, T.; Behne, A.; Heyer, R.; Kohrs, F.; Benndorf, D.; Hoffmann, M.; Lehteva, M.; Reichl, U.; Martens, L.; Rapp, E.: The MetaProteomeAnalyzer: A Powerful Open-Source Software Suite for Metaproteomics Data Analysis and Interpretation. Journal of Proteome Research 14 (3), pp. 1557 - 1565 (2015)
  10. 10.
    Journal Article
    Kohrs, F.; Heyer, R.; Magnussen, A.; Benndorf, D.; Muth, T.; Behne, A.; Rapp, E.; Kausmann, R.; Heiermann, M.; Klocke, M.: Sample prefractionation with liquid isoelectric focusing enables in depth microbial metaproteome analysis of mesophilic and thermophilic biogas plants. Anaerobe 29, pp. 59 - 67 (2014)
  11. 11.
    Journal Article
    Hanreich, A.; Schimpf, U.; Zakrzewski, M.; Schlüter, A.; Benndorf, D.; Heyer, R.; Rapp, E.; Puhler, A.; Reichl, U.; Klocke, M.: Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation. Systematic and Applied Microbiology 36 (5), pp. 330 - 338 (2013)
  12. 12.
    Journal Article
    Heyer, R.; Kohrs, F.; Benndorf, D.; Rapp, E.; Kausmann, R.; Heiermann, M.; Klocke, M.; Reichl, U.: Metaproteome analysis of the microbial communities in agricultural biogas plants. New biotechnology 30 (6), pp. 614 - 622 (2013)
  13. 13.
    Journal Article
    Hanreich, A.; Heyer, R.; Benndorf, D.; Rapp, E.; Pioch, M.; Reichl, U.; Klocke, M.: Metaproteome analysis to determine the metabolically active part of thermophilic microbial community producing biogas from agricultural biomass. Canadian Journal of Microbiology 58 (7), pp. 917 - 922 (2012)

Talk (12)

  1. 14.
    Talk
    Benndorf, D.; Kohrs, F.; Heyer, R.; Becher, B.; Rapp, E.; De Vrieze , J.; Schlüter, A.; Sczyrba, A.; Boon, N.; Reichl, U.: High-throughput metaproteomics of biogas plants. Symposium on Advances and Applications in Metaproteomics, Magdeburg, Germany (2016)
  2. 15.
    Talk
    Benndorf, D.; Heyer, R.; Schallert, K.; Muth, T.; Rapp, E.; Reichl, U.: In-depth metaproteomics of a biogas plant operating at high ammonia nitrogen concentrations. Biogas Science 2016, Szeged, Hungary (2016)
  3. 16.
    Talk
    Heyer, R.; Benndorf, D.; Kohrs, F.; De Vrieze, J.; Boon, N.; Hoffmann, M.; Rapp, E.; Schlüter, A.; Sczyrba, A.; Reichl, U.: Proteotyping of biogas plant microbiomes. Annual Conference of the Association for General and Applied Microbiology (VAAM), Jena, Germany (2016)
  4. 17.
    Talk
    Kohrs, F.; Heyer, R.; Benndorf, D.; Bissinger, T.; Kottler, R.; Fronk, K.; Rapp, E.; Reichl, U.: Kultivierung und Metaproteomanalyse anaerober mikrobieller Gemeinschaften. 23. SIMBA-Treffen, Havelberg, Germany (2016)
  5. 18.
    Talk
    Benndorf, D.; Kohrs, F.; Heyer, R.; Rapp, E.; De Vrieze, J.; Boon, N.; Schlüter, A.; Sczyrba, A.; Reichl, U.: An optimized workflow for high-throughput metaproteomics of biogas plants. 9th International Symposium on Anaerobic Microbiology, Portorož, Slovenia (2015)
  6. 19.
    Talk
    Bensmann, B.; Hanke-Rauschenbach, R.; Heyer, R.; Kohrs, F.; Benndorf, D.; Sundmacher, K.: Methanation of renewable hydrogen within biogas reactors? A process systems engineering approac. CHISA 2014, Prague/Czech Republic (2014)
  7. 20.
    Talk
    Heyer, R.; Kohrs, F.; Benndorf, D.; Rapp, E.; Reichl, U.: Analysing the microbial population structure and metabolic function by metaproteome analysis. Biogas Science 2014 (International Conference on Anaerobic Digestion), Wien, Austria (2014)
 
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