Journal Article (1086)

2012
Journal Article
Sommer, S.; Kienle, A.: Auto-Tuning of Multivariable PID Controllers Using Iterative Feedback Tuning. at - Automatisierungstechnik 60 (1), pp. 20 - 27 (2012)
Journal Article
Stein, M.; Pilli, M.; Bernauer, S.; Habermann, B. H.; Zerial, M.; Wade, R. C.: The Interaction Properties of the Human Rab GTPase Family – A Comparative Analysis Reveals Determinants of Molecular Binding Selectivity. PLoS ONE 7 (4), e34870 (2012)
Journal Article
Vidaković-Koch, T.; González Martinez, I.; Kuwertz, R.; Kunz, U.; Turek, T.; Sundmacher, K.: Electrochemical Membrane Reactors for Sustainable Chlorine Recycling. Membranes 2 (3), pp. 510 - 528 (2012)
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Yu, E.H.; Wang, Y.; Krewer, U.; Li, L.; Scott, K.: Direct oxidation alkaline fuel cells: from materials to systems. Energy & Environmental Science 5 (2), pp. 5668 - 5680 (2012)
2011
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Baur, U.; Beattie, C.; Benner, P.; Gugercin, S.: Interpolatory Projection Methods for Parameterized Model Reduction. SIAM Journal on Scientific Computing 33 (5), pp. 2489 - 2518 (2011)
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Benner, P.; Damm, T.: Lyapunov Equations, Energy Functionals, and Model Order Reduction of Bilinear and Stochastic Systems. SIAM Journal on Control and Optimization 49 (2), pp. 686 - 711 (2011)
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Chen, L.; Zhou, T.; Chen, L.; Ye, Y.; Qi, Z.; Freund, H.; Sundmacher, K.: Selective Oxidation of Cyclohexanol to Cyclohexanone in the Ionic Liquid 1-Octyl-3-Methylimidazolium Chloride. Chemical Communications 47 (33), pp. 9354 - 9356 (2011)
Journal Article
Hädicke, O.; Grammel, H.; Klamt, S.: Metabolic network modeling of redox balancing and biohydrogen production in purple nonsulfur bacteria. BMC Systems Biology 5, 150 (2011)
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Hamel, C.; Wolff, T.; Seidel-Morgenstern, A.: Compatibility of Transport and Reaction in Membrane Reactors Used for the Oxidative Dehydrogenation of Short-Chain Hydrocarbons. International Journal of Chemical Reactor Engineering 9, A12 (2011)
Journal Article
Kolvenbach, B. A.; Lenz, M.; Benndorf, D.; Rapp, E.; Fousek, J.; Vlcek, C.; Schäffer, A.; Gabriel, F. L.; Kohler, H.-P. E.; Corvini, P. F.: Purification and characterization of hydroquinone dioxygenase from Sphingomonas sp. strain TTNP3. AMB Express 1, 8 (2011)
Journal Article
Lu, H.; Rihko-Struckmann, L.; Sundmacher, K.: Spontaneous oscillations of cell voltage, power density, and anode exit CO concentration in a PEM fuel cell. Physical Chemistry Chemical Physics 13 (40), pp. 18179 - 18185 (2011)
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Petiot, E.; Jacob, D.; Lanthier, S.; Lohr, V.; Ansorge, S.; Kamen, A. A.: Metabolic and Kinetic analyses of influenza production in perfusion HEK293 cell culture. BMC Biotechnology 11, 84 (2011)
Journal Article
Popov, M.; Petrov, S. A.; Nacheva, G.; Ivanov, I.; Reichl, U.: Effects of a recombinant gene expression on ColE1-like plasmid segregation in Escherichia coli. BMC Biotechnology 11, 18 (2011)
Journal Article
Roedig, J.; Rapp, E.; Höper, D.; Genzel, Y.; Reichl, U.: Impact of Host Cell Line Adaptation on Quasispecies Composition and Glycosylation of Influenza A Virus Hemagglutinin. PLoS One 6 (12), e27989 (2011)
Journal Article
Ryll, A.; Samaga, R.; Schaper, F.; Alexopoulos, L.G.; Klamt, S.: Large-scale models of IL-1 and IL-6 signaling and their hepatocellular specification. Molecular BioSystems 7 (12), pp. 3253 - 3270 (2011)
Journal Article
Shalaby, R.; Schauer, T.; Liedecke, W.; Raisch, J.: Amplifier design for EMG recording from stimulation electrodes during functional electrical stimulation leg cycling ergometry. Biomedizinische Technik 56 (1), pp. 23 - 33 (2011)
Journal Article
Zenith, F.; Krewer, U.: Simple and reliable model for estimation of methanol cross-over in direct methanol fuel cells and its application on methanol-concentration control. Energy & Environmental Science 4 (2), pp. 519 - 527 (2011)
2010
Journal Article
Andres, C.; Meyer, S.; Dina, O. A.; Levine, J. D.; Hucho, T.: Quantitative automated microscopy (QuAM) elucidates growth factor specific signalling in pain sensitization. Molecular Pain 6, 98 (2010)
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Attia, S. A.; Azhmyakov, V.; Raisch, J.: On an Optimization Problem for a Class of Impulsive Hybrid Systems. Discrete Event Dynamic Systems: Theory and Applications 20 (2 ), pp. 215 - 231 (2010)
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Barrantes Bustinza, I. W.; Glockner, G.; Meyer, S.; Marwan, W.: Transcriptomic changes arising during light-induced sporulation in Physarum polycephalum. BMC Genomics 11, 115 (2010)
Journal Article
Cheviakov, A. F.; Ward, M. J.; Straube, R.: An Asymptotic Analysis of the Mean First Passage Time for Narrow Escape Problems: Part II: The Sphere. SIAM Multiscale Modeling and Simulation 8 (3), pp. 836 - 870 (2010)
Journal Article
Franke, R.; Theis, F.J.; Klamt, S.: From Binary to Multivalued to Continuous Models: The Iac Operon as a Case Study. Journal of Integrative Bioinformatics 7 (1), 151 (2010)
Journal Article
Hao Yu, E.; Krewer, U.; Scott, K.: Principles and Materials Aspects of Direct Alkaline Alcohol Fuel Cells. Energies 3 (8), pp. 1499 - 1528 (2010)
Journal Article
Ivanov, I.; Vidaković-Koch, T.; Sundmacher, K.: Recent Advances in Enzymatic Fuel Cells: Experiments and Modeling. Energies 3 (4), pp. 803 - 846 (2010)
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Klamt, S.; Flassig, R.; Sundmacher, K.: TRANSWESD: inferring cellular networks with transitive reduction. Bioinformatics 26 (17), pp. 2160 - 2168 (2010)
Journal Article
Ritter, J.; Wahl, A.; Freund, S.; Genzel, Y.; Reichl, U.: Metabolic effects of influenza virus infection in cultured animal cells: Intra- and extracellular metabolite profiling. BMC Systems Biology 4, 61 (2010)
Journal Article
Samaga, R.; von Kamp, A.; Klamt, S.: Computing Combinatorial Intervention Strategies and Failure Modes in Signaling Networks. Journal of Computational Biology 17 (1), pp. 39 - 53 (2010)
Journal Article
Straube, R.; Nicola, E. M.: Diffusive coupling can discriminate between similar reaction mechanisms in an allosteric enzyme system. BMC Systems Biology 4, 165 (2010)
Journal Article
Streif, S.; Oesterhelt, D.; Marwan, W.: A predictive computational model of the kinetic mechanism of stimulus-induced transducer methylation and feedback regulation through CheY in archaeal phototaxis and chemotaxis. BMC Systems Biology 4, 27 (2010)
Journal Article
von Langermann, J.; Lorenz, H.; Böhm, O.; Flemming, A.; Bernsdorf, A.; Köckerling, M.; Schinzer, D.; Seidel-Morgenstern, A.: R*,S*-6,7-Dimethoxy-3-(4-methoxy-6-methyl-5,6,7,8-tetrahydro-[1,3]dioxolo[4,5-g]isoquinolin-5-yl)-3H-isobenzofuran-1-one (racemic alpha-Noscapine). Acta Crystallographica Section E: Structure Reports Online 66, o570 (2010)
2009
Journal Article
Coombs, D.; Straube, R.; Ward, M. J.: Diffusion on a Sphere with Localized Traps: Mean First Passage Time, Eigenvalue Asymptotics, and Fekete Points. SIAM Journal on Applied Mathematics 70 (1), pp. 302 - 332 (2009)
Journal Article
Gogolenko, S.Y.; Svjatnyi, V.: Architecture aware parallelization of solvers for PDE systems on geometrical graphs. Computer science - Research and Development 23 (3-4), pp. 225 - 230 (2009)
Journal Article
Grötsch, M.; Mangold, M.; Kienle, A.: Analysis of the Coupling Behavior of PEM Fuel Cells and DC-DC Converters. Energies 2 (1), pp. 71 - 96 (2009)
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Hussain, A.; Seidel-Morgenstern, A.; Tsotsas, E.: Effect of top layer's material and flow direction on mass transfer through multi-layer ceramic membranes. Canadian Journal of Pure & Applied Sciences 3 (3), pp. 993 - 1000 (2009)
Journal Article
Hussain, A.; Seidel-Morgenstern, A.; Tsotsas, E.: Influence of volumetric flow rate and temperature on mass transfer in composite ceramic membranes for membrane reactors. Canadian Journal of Pure and Applied Sciences 3 (1), pp. 741 - 749 (2009)
Journal Article
Ivanov, I.; Vidaković-Koch, T.; Sundmacher, K.: Glucose electrooxidation for biofuel cell applications. Chemical and Biochemical Engineering Quarterly 23 (1), pp. 77 - 86 (2009)
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Klamt, S.; Haus, U.-U.; Theis, F.: Hypergraphs and cellular networks. PLoS Computational Biology 5 (5), p. e1000385 (2009)
Journal Article
Klamt, S.; von Kamp, A.: Computing Paths and Cycles in Biological Interaction Graphs. BMC Bioinformatics 10, p. 181 (2009)
Journal Article
Mirschel, S.; Steinmetz, K.; Rempel, M.; Ginkel, M.; Gilles, E. D.: ProMoT: Modular Modeling for Systems Biology. Bioinformatics 25 (5), pp. 687 - 689 (2009)
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Poltz, R.; Franke, R.; Schweitzer, K.; Klamt, S.; Gilles, E. D.; Naumann, M.: Logical network of genotoxic stress-induced NF-kB signal transduction predicts putative target structures for therapeutic intervention strategies. Advances and Applications in Bioinformatics and Chemistry 2, pp. 125 - 138 (2009)
Journal Article
Saez-Rodriguez, J.; Alexopoulos, L. G.; Epperlein, J.; Samaga, R.; Lauffenburger, D. A.; Klamt, S.; Sorger, P. K.: Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction. Molecular Systems Biology 5, p. 331 (2009)
Journal Article
Samaga, R.; Saez-Rodriguez, J.; Alexopoulos, L. G.; Sorger, P. K.; Klamt, S.: The logic of EGFR/ErbB signaling: theoretical properties and analysis of high-throughput data. PLoS Computational Biology 5 (8), e1000438 (2009)
Journal Article
Schlatter, R.; Schmich, K.; Avalos Vizcarra, I.; Scheurich, P.; Sauter, T.; Borner, C.; Ederer, M.; Merfort, I.; Sawodny, O.: ON/OFF and Beyond - A Boolean Model of Apoptosis. PLoS Computational Biology 5 (12), e1000595 (2009)
Journal Article
Schlesner, M.; Miller, A.; Streif, S.; Staudinger, W.; Müller , J.; Scheffer, B.; Siedler, F.; Oesterhelt, D.: Identification of Archaea-specific chemotaxis proteins which interact with the flagellar apparatus. BMC Microbiology 9, 56 (2009)
Journal Article
Sommer, S.; Böhm, J.; Kienle, A.: Ein Energie-Management-System für wärmeintensive Produktionsprozesse. at - Automatisierungstechnik 57 (11), pp. 578 - 585 (2009)
Journal Article
Straube, R.; Ward, M. J.: An asymptotic analysis of intracellular signaling gradients arising from multiple small compartments. SIAM Journal on Applied Mathematics 70 (1), pp. 248 - 269 (2009)
Journal Article
Vidaković, T.; Christov, M.; Sundmacher, K.: A method for rough estimation of the catalyst surface area in a fuel cell. Journal of Applied Electrochemistry 39 (2), pp. 213 - 225 (2009)
Journal Article
Wittmann, D. M.; Krumsiek, J.; Saez, J.; Lauffenburger, D. A.; Klamt, S.; Theis, F.: Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling. BMC Systems Biology 3, 98 (2009)
2008
Journal Article
Antoniukas, L.; Grammel, H.; Sasnauskas, K.; Reichl, U.: Profiling of external metabolites during production of hantavirus nucleocapsid protein with recombinant Saccharomyces cerevisiae. Biotechnology Letters 30 (3), pp. 415 - 420 (2008)
Journal Article
Conzelmann, H.; Fey, D.; Gilles, E. D.: Exact model reduction of combinatorial reaction networks. BMC Systems Biology 2, p. 78 (2008)
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