Publications of J. Stelling

Anders, A., Lilie, H., Franke, K., Kapp, L., Stelling, J., Gilles, E. D., & Breunig, K. D. (2006)The galactose switch in Kluyveromyces lactis depends on nuclear competition between Gal4 and Gal1 for Gal80 bindingThe Journal of Biological Chemistry, 281 (39), 29337–29348doi: 10.1074/jbc.M604271200.

Zak, D. E., Stelling, J., & Doyle, F. J. (2005)Sensitivity analysis of oscillatory (bio)chemical systemsComputers and Chemical Engineering, 29, 663–673doi: 10.1016/j.compchemeng.2004.08.021.

Papin, J. A., Stelling, J., Price, N. D., Klamt, S., Schuster, S., & Palsson, B. O. (2004)Comparison of network-based pathway analysis methodsTrends in Biotechnology, 22 (8), 400–405doi: 10.1016/j.tibtech.2004.06.010.

Stelling, J. (2004)Mathematical models in microbial systems biologyCurrent Opinion in Microbiology, 7 (5), 513–518doi: 10.1016/j.mib.2004.08.004.

Stelling, J. & Gilles, E. D. (2004)Mathematical Modeling of Complex Regulatory NetworksIEEE Transactions on Nanobioscience, 3 (3), 172–179doi: 10.1109/TNB.2004.833688.

Stelling, J., Gilles, E. D., & Doyle III, F. J. (2004)Robustness properties of circadian clock architecturesProceedings of the National Academy of Sciences U.S.A., 101 (36), 13210–13215doi: 10.1073/pnas.0401463101.

Stelling, J., Sauer, U., Szallasi, Z., Doyle III, F. J., & Doyle, J. (2004)Robustness of Cellular FunctionsCell, 118 (6), 675–685doi: 10.1016/j.cell.2004.09.008.

Hucka, M., Finney, A., Sauro, H. M., Bolouri, H., Doyle, J. C., Kitano, H., Arkin, A. P., Bornstein, B. J., Bray, D., Cornish-Bowden, A., Cuellar, A. A., Dronov, S., Gilles, E. D., Ginkel, M., Gor, V., Goryanin, I. I., Hedley, W. J., Hodgman, T. C., Hofmeyr, J. H., Hunter, P. J., Juty, N. S., Kasberger, J. L., Kremling, A., Kummer, U., Le Novere, N., Loew, L. M., Lucio, D., Mendes, P., Minch, E., Mjolsness, E. D., Nakayama, Y., Nelson, M. R., Nielsen, P. F., Sakurada, T., Schaff, J. C., Shapiro, B. E., Shimizu, T. S., Spence, H. D., Stelling, J., Takahashi, K., Tomita, M., Wagner, J., & Wang, J. (2003)The systems biology markup language (SBML): a medium for representation and exchange of biochemical network modelsBioinformatics, 19 (4), 524–531doi: 10.1093/bioinformatics/btg015.

Klamt, S. & Stelling, J. (2003)Two approaches for metabolic pathway analysis?Trends in Biotechnology, 21 (2), 64–69doi: 10.1016/S0167-7799(02)00034-3.

Klamt, S., Stelling, J., Ginkel, M., & Gilles, E. D. (2003)FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux mapsBioinformatics, 19 (2), 261–269doi: 10.1093/bioinformatics/19.2.261.

Klamt, S. & Stelling, J. (2002)Combinatorial complexity of pathway analysis in metabolic networksMolecular Biology Reports, 29 (1-2), 233–236doi: 10.1023/A:1020390132244.

Stelling, J., Klamt, S., Bettenbrock, K., Schuster, S., & Gilles, E. D. (2002)Metabolic network structure determines key aspects of functionality and regulationNature, 420 (6912), 190–193doi: 10.1038/nature01166.

Kremling, A., Bettenbrock, K., Stelling, J., Reichl, U., & Gilles, E. D. (2001)Systemorientierte Bioprozesstechnik: interdisziplinäre Forschung in Biologie, System- und ComputerwissenschaftenMagdeburger Wissenschaftsjournal, 6 (1/2), 29–36.

Stelling, J., Kremling, A., Ginkel, M., Bettenbrock, K., & Gilles, E. D. (2001)Towards a Virtual Biological LaboratoryFoundations of systems biology189–212.

Conradi, C., Stelling, J., & Raisch, J. (2001)Structure discrimination of continuous models for biochemical reaction networks via finite state machinesIn: Proceedings of the 2001 IEEE International Symposium on Intelligent Control ISIC'01, 138–143doi: 10.1109/ISIC.2001.971498.

Stelling, J. & Gilles, E. D. (2001)Robustness vs. identifiability of regulatory modules? The case of mitotic control in budding yeast cell cycle regulationIn: Proceedings of the Second International Conference on Systems Biology, 181–190.

Stelling, J. & Gilles, E. D. (2000)Modular Mathematical Modeling of Complex Regulatory Networks: Application to Cell Cycle Regulation in Saccharomyces CerevisiaeIn: Proceedings of the 4th International Congress on Biochemical Engineering, 43–47.

Stelling, J. (2004)Systems analysis of robustness in cellular networksPhD Thesis, Shaker, Aachen.