Journal Article (87)

2022
Journal Article
Lund, K.: Adaptively Restarted Block Krylov Subspace Methods with Low-Synchronization Skeletons. Numerical Algorithms 93, pp. 731 - 764 (2022)
Journal Article
Mahour, R.; Lee, J. W.; Grimpe, P.; Boecker, S.; Grote, V.; Klamt, S.; Seidel-Morgenstern, A.; Rexer, T.; Reichl, U.: Cell‐free multi‐enzyme synthesis and purification of uridine diphosphate galactose. ChemBioChem 23 (2), e202100361 (2022)
Journal Article
Marušič, N.; Otrin, L.; Rauchhaus, J.; Zhao, Z.; Kyrilis, F. L.; Hamdi, F.; Kastritis, P. L.; Dimova, R.; Ivanov, I.; Sundmacher, K.: Increased efficiency of charge-mediated fusion in polymer/lipid hybrid membranes. Proceedings of the National Academy of Sciences 119 (20), e2122468119 (2022)
Journal Article
Marušič, N.; Zhao, Z.; Otrin, L.; Dimova, R.; Ivanov, I.; Sundmacher, K.: Fusion‐Induced Growth of Biomimetic Polymersomes: Behavior of Poly(dimethylsiloxane)‐Poly(ethylene oxide) Vesicles in Saline Solutions Under High Agitation. Macromolecular Rapid Communications 43 (5), e2100712 (2022)
Journal Article
Miličić, T.; Altaf, H.; Vorhauer-Huget, N.; Zivkovic, L.; Tsotsas, E.; Vidaković-Koch, T.: Modeling and Analysis of Mass Transport Losses of Proton Exchange Membrane Water Electrolyzer. Processes 10 (11), 2417 (2022)
Journal Article
Misra, R.; Wisniewski, R.; Zuyev, A.: Attitude Stabilization of a Satellite Having Only Electromagnetic Actuation Using Oscillating Controls. Aerospace 9 (8), 444 (2022)
Journal Article
Mitchell, T.; Overton, M. L.: On Properties of Univariate Max Functions at Local Maximizers. Optimization Letters 16, pp. 2527 - 2541 (2022)
Journal Article
Möckel, M.; Baldok, N.; Walles, T.; Hartig, R.; Müller, A. J.; Reichl, U.; Genzel, Y.; Walles, H.; Wiese-Rischke, C.: Human 3D Airway Tissue Models for Real-Time Microscopy: Visualizing Respiratory Virus Spreading. Cells 11 (22), 3634 (2022)
Journal Article
Natarajan, M.; Kumar, N.; Joshi, M.; Stein, M.; Kaur‐Ghumaan, S.: Mechanism of Diiron Hydrogenase Complexes Controlled by Nature of Bridging Dithiolate Ligand. ChemistryOpen 11 (1), e202100238 (2022)
Journal Article
Offersgaard, A.; Duarte Hernandez, C. R.; Pihl, A. F.; Venkatesan, N. P.; Krarup, H.; Lin, X.; Reichl, U.; Bukh, J.; Genzel, Y.; Gottwein, J. M.: High-Titer Hepatitis C Virus Production in a Scalable Single-Use High Cell Density Bioreactor. Vaccines 10 (2), 249 (2022)
Journal Article
Palitta, D.; Lefteriu, S.: An Efficient, Memory-Saving Approach for the Loewner Framework. Journal of Scientific Computing 91, 31 (2022)
Journal Article
Palitta, D.; Pozza, S.; Simoncini, V.: The Short-term Rational Lanczos Method and Applications. SIAM Journal on Scientific Computing 44 (4), pp. A2843 - A2870 (2022)
Journal Article
Papakonstantinou, G.; Spanos, I.; Dam, A. P.; Schlögl, R.; Sundmacher, K.: Electrochemical evaluation of the de-/re-activation of oxygen evolving Ir oxide. Physical Chemistry Chemical Physics 24 , pp. 14579 - 14591 (2022)
Journal Article
Qin, H.; Song, Z.; Qi, Z.; Sundmacher, K.: Comparative screening of organic solvents, ionic liquids, and their binary mixtures for vitamin E extraction from deodorizer distillate. Chemical Engineering and Processing - Process Intensification 171, 108711 (2022)
Journal Article
Qin, H.; Wang, Z.; Song, Z.; Zhang, X.; Zhou, T.: High-Throughput Computational Screening of Ionic Liquids for Butadiene and Butene Separation. Processes 10 (1), 165 (2022)
Journal Article
Redmann, M.; Pontes Duff, I.: Full State Approximation by Galerkin Projection Reduced Order Models for Stochastic and Bilinear Systems. Applied Mathematics and Computation 420, 126561 (2022)
Journal Article
Rodrigues Correia Ramos, J.; Bissinger, T.; Genzel, Y.; Reichl, U.: Impact of Influenza A Virus Infection on Growth and Metabolism of Suspension MDCK Cells Using a Dynamic Model. Metabolites 12 (3), 239 (2022)
Journal Article
Saikia, B.; Seidel-Morgenstern, A.; Lorenz, H.: Multicomponent Materials to Improve Solubility: Eutectics of Drug Aminoglutethimide. Crystals 12 (1), 40 (2022)
Journal Article
Sanchez Medina, E. I.; Linke, S.; Stoll, M.; Sundmacher, K.: Graph neural networks for the prediction of infinite dilution activity coefficients. Digital Discovery 1 (3), pp. 216 - 225 (2022)
Journal Article
Schneider, P.; Bekiaris, P. S.; Kamp von, A.; Klamt, S.: StrainDesign: a Comprehensive Python Package for Computational Design of Metabolic Networks. Bioinformatics 38 (21), pp. 4981 - 4983 (2022)
Journal Article
Schulze-Niemand, E.; Naumann, M.; Stein, M.: Substrate‐assisted activation and selectivity of the bacterial RavD effector deubiquitinylase. Proteins: Structure, Function, and Bioinformatics 90 (4), pp. 947 - 958 (2022)
Journal Article
Scoma, A.; Khor, W.; Coma, M.; Heyer, R.; Props, R.; Bouts, T.; Benndorf, D.; Li, D.; Zhang, H.; Rabaey, K.: Lignocellulose Fermentation Products Generated by Giant Panda Gut Microbiomes Depend Ultimately on pH Rather than Portion of Bamboo: A Preliminary Study. Microorganisms 10 (5), 978 (2022)
Journal Article
Seidel, C.; Nikolić, D.; Felischak, M.; Petkovska, M.; Seidel-Morgenstern, A.; Kienle, A.: Forced Periodic Operation of Methanol Synthesis in an Isothermal Gradientless Reactor. Chemical Engineering & Technology 45 (12), pp. 2261 - 2272 (2022)
Journal Article
Smit, A. T.; Verges, M.; Schulze, P.; van Zomeren, A.; Lorenz, H.: Laboratory- to Pilot-Scale Fractionation of Lignocellulosic Biomass Using an Acetone Organosolv Process. ACS Sustainable Chemistry & Engineering 10 (32), pp. 10503 - 10513 (2022)
Journal Article
Sydor, S.; Dandyk, C.; Schwerdt, J.; Manka, P.; Benndorf, D.; Lehmann, T.; Schallert, K.; Wolf, M.; Reichl, U.; Canbay, A. et al.; Bechmann, L. P.; Heyer, R.: Discovering Biomarkers for Non-Alcoholic Steatohepatitis Patients with and without Hepatocellular Carcinoma Using Fecal Metaproteomics. International Journal of Molecular Sciences 23 (16), 8841 (2022)
Journal Article
Thiele, S.; Kamp von, A.; Bekiaris, P. S.; Schneider, P.; Klamt, S.: CNApy: a CellNetAnalyzer GUI in Python for Analyzing and Designing Metabolic Networks. Bioinformatics 38 (5), pp. 1467 - 1469 (2022)
Journal Article
Tolonen, A. C.; Beauchemin, N.; Bayne, C.; Li, L.; Tan, J.; Lee, J.; Meehan, B. M.; Meisner, J.; Millet, Y.; LeBlanc, G. et al.; Kottler, R.; Rapp, E.; Murphy, C.; Turnbaugh, P. J.; von Maltzahn, G.; Liu, C. M.; van Hylckama Vlieg, J. E. T.: Synthetic glycans control gut microbiome structure and mitigate colitis in mice. Nature Communications 13 (1), 1244 (2022)
Journal Article
Vettermann, J.; Steinert, A.; Brecher, C.; Benner, P.; Saak, J.: Compact Thermo-Mechanical Models for the Fast Simulation of Machine Tools with Nonlinear Component Behavior. at-Automatisierungstechnik 70 (8), pp. 692 - 704 (2022)
Journal Article
Wang, Z.; Zhou, Y.; Zhou, T.; Sundmacher, K.: Identification of Optimal Metal-Organic Frameworks by Machine Learning: Structure Decomposition, Feature Integration, and Predictive Modeling. Computers & Chemical Engineering 160, 107739 (2022)
Journal Article
Weber, S.; Zimmermann, R. T.; Bremer, J.; Abel, K. L.; Poppitz, D.; Prinz, N.; Ilsemann, J.; Wendholt, S.; Yang, Q.; Pashminehazar, R. et al.; Monaco, F.; Cloetens, P.; Huang, X.; Kübel, C.; Kondratenko, E.; Bauer, M.; Bäumer, M.; Zobel, M.; Gläser, R.; Sundmacher, K.; Sheppard, T. L.: Digitization in Catalysis Research: Towards a Holistic Description of a Ni/Al2O3 Reference Catalyst for CO2 Methanation. ChemCatChem 14 (8), e202101878 (2022)
Journal Article
Wünsche, S.; Seidel-Morgenstern, A.; Lorenz, H.: Cocrystallization of Curcuminoids with Hydroxybenzenes Pyrogallol and Hydroxyquinol: Investigations of Binary Thermal Phase Behaviors. Crystal Growth & Design 22 (5), pp. 3303 - 3310 (2022)
Journal Article
Yalçin-Özkat, G.: Computational studies with flavonoids and terpenoids as BRPF1 inhibitors: in silico biological activity prediction, molecular docking, molecular dynamics simulations, MM/PBSA calculations. SAR and QSAR in Environmental Research 33 (7), pp. 533 - 550 (2022)
Journal Article
Zhang, X.; Zhou, T.; Sundmacher, K.: Integrated metal–organic framework and pressure/vacuum swing adsorption process design: Descriptor optimization. AIChE Journal 68 (2), e17524 (2022)
Journal Article
Zhang, X.; Zhou, T.; Sundmacher, K.: Integrated metal‐organic framework (MOF) and pressure/vacuum swing adsorption process design:MOFmatching. AIChE Journal 68 (9), e17788 (2022)
Journal Article
Zhaopeng, L.; Nees, M.; Bettenbrock, K.; Rinas, U.: Is energy excess the initial trigger of carbon overflow metabolism? Transcriptional network response of carbon-limited Escherichia coli to transient carbon excess. Microbial Cell Factories 21, 67 (2022)
Journal Article
Zhou, Y.; Zhang, X.; Zhou, T.; Sundmacher, K.: Computational Screening of Metal-Organic Frameworks for Ethylene Purification from Ethane/Ethylene/Acetylene Mixture. Nanomaterials 12 (5), 869 (2022)
Journal Article
Zimmermann, R. T.; Bremer, J.; Sundmacher, K.: Load-flexible fixed-bed reactors by multi-period design optimization. Chemical Engineering Journal 428, 130771 (2022)

Book (1)

2022
Book
Kraume, M.; Enders, S.; Drews, A.; Schomäcker, R.; Engell, S.; Sundmacher, K. (Eds.): Integrated Chemical Processes in Liquid Multiphase Systems: from Chemical Reaction to Process Design and Operation. De Gruyter, Berlin/Boston (2022), 622 pp.

Book Chapter (5)

2022
Book Chapter
Chellappa, S.; Feng, L.; Benner, P.: An Adaptive Sampling Approach for the Reduced Basis Method. In: Realization and Model Reduction of Dynamical Systems – A Festschrift in Honor of 70th Birthday of Thanos Antoulas, pp. 137 - 155 (Eds. Beattie, C.; Benner, P.; Embree, M.; Gugercin, S.; Lefteriu, S.). Springer International Publishing, Cham (2022)
Book Chapter
Gosea, I. V.; Poussot-Vassal, C.; Antoulas, A. C.: Data-driven modeling and control of large-scale dynamical systems in the Loewner framework: Methodology and applications. In: Numerical Control: Part A, pp. 499 - 530 (Eds. Trélat, E.; Zuazua, E.). Elsevier (2022)
Book Chapter
Himpe, C.; Grundel, S.; Benner, P.: Next-Gen Gas Network Simulation. In: Progress in Industrial Mathematics at ECMI 2021, pp. 107 - 113 (Eds. Ehrhardt, M.; Günther, M.). Springer, Cham, Switzerland (2022)
Book Chapter
Pontes Duff, I.; Goyal, P. K.; Benner, P.: Data-Driven Identification of Rayleigh-Damped Second-Order Systems. In: Realization and Model Reduction of Dynamical Systems - A Festschrift in Honor of 70th Birthday of Thanos Antoulas, pp. 255 - 272 (Eds. Beattie, C.; Benner, P.; Embree, M.; Gugercin, S.; Lefteriu, S.). Springer International Publishing, Cham (2022)
Book Chapter
Sundmacher, K.: Integrated Process Design. In: Integrated Chemical Processes in Liquid Multiphase Systems, pp. 509 - 573 (Eds. Kraume, M.; Enders, S.; Drews, A.; Schomäcker, R.; Engell, S. et al.). De Gruyter (2022)

Conference Paper (14)

2022
Conference Paper
Bendokat, T.; Zimmermann, R.: Geometric Optimization for Structure-Preserving Model Reduction of Hamiltonian Systems. 10th Vienna International Conference on Mathematical Modelling (MATHMOD), Vienna, Austria, July 27, 2022 - July 29, 2022. IFAC-PapersOnLine 55 (20), pp. 457 - 462 (2022)
Conference Paper
Espinel-Rios, S.; Huber, N.; Alcalá Orozco, E. A.; Morabito, B.; Rexer, T.; Reichl, U.; Klamt, S.; Findeisen, R.: Cell-free biosynthesis meets dynamic optimization and control: a fed-batch framework. 9th IFAC Conference on Foundations of Systems Biology in Engineering (FOSBE), Cambridge, MA, August 28, 2022 - August 31, 2022. IFAC-PapersOnLine 55 (23), pp. 92 - 97 (2022)
Conference Paper
Espinel-Rios, S.; Morabito , B.; Pohlodek, J.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Optimal control and dynamic modulation of the ATPase gene expression for enforced ATP wasting in batch fermentations. In: IFAC-PapersOnLine, Vol. 55, pp. 174 - 180. 13th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, DYCOPS 2022, Busan, Korea, June 14, 2022 - June 17, 2022. (2022)
Conference Paper
Espinel-Rios, S.; Morabito, B.; Bettenbrock, K.; Findeisen, R.: Soft sensor for monitoring dyamic changes in cell composition. 9th IFAC Conference on Foundations of Systems Biology in Engineering (FOSBE), Cambridge, MA, August 28, 2022 - August 31, 2022. IFAC-PapersOnLine 55 (23), pp. 98 - 103 (2022)
Conference Paper
Gosea, I. V.; Antoulas, A. C.: The one-sided Loewner framework and connections to other model reduction methods based on interpolation. 25th International Symposium on Mathematical Theory of Networks and Systems MTNS 2022, Bayreuth, Germany, September 12, 2022 - September 16, 2022. IFAC-PapersOnLine 55 (30), pp. 377 - 382 (2022)
Conference Paper
Heiland, J.; Kim, Y.: Convolutional Autoencoders and Clustering for Low-dimensional Parametrization of Incompressible Flows. 25th IFAC Symposium on Mathematical Theory of Networks and Systems MTNS 2022, Bayreuth, Germany, September 12, 2022 - September 16, 2022. IFAC-PapersOnLine 55 (30), pp. 430 - 435 (2022)
Conference Paper
Karachalios, D.; Gosea, I. V.; Antoulas, A. C.: A framework for fitting quadratic-bilinear systems with applications to models of electrical circuits. 10th Vienna International Conference on Mathematical Modelling - MATHMOD 2022 , Vienna, Austria, July 27, 2022 - July 29, 2022. IFAC-PapersOnLine 55 (20), pp. 7 - 12 (2022)
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