Publications of Eric Schulze-Niemand

Journal Article (10)

2023
Journal Article
Creutznacher, R., Schulze-Niemand, E., König, P., Stanojlovic, V., Mallagaray, A., Peters, T., Stein, M., & Schubert, M. (2023)Conformational Control of Fast Asparagine Deamidation in a Norovirus Capsid ProteinBiochemistry, 62 (5), 1032–1043doi: 10.1021/acs.biochem.2c00656.
Journal Article
Gavutis, M., Schulze-Niemand, E., Lee, H.-H., Liedberg, B., Stein, M., & Valiokas, R. (2023)Bilayer lipid membrane formation on surface assemblies with sparsely distributed tethersNanoscale, 15, 9759–9774doi: 10.1039/D2NR07069C.
Journal Article
Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M. (2023)Structural Dynamics of Lys11-Selective Deubiquitinylase Cezanne-1 during the Catalytic CycleJournal of Chemical Information and Modeling, 63 (7), 2084–2094doi: 10.1021/acs.jcim.2c01281.
2022
Journal Article
Schlüter, D., Schulze-Niemand, E., Stein, M., & Naumann, M. (2022)Ovarian tumor domain proteases in pathogen infectionTrends in Microbiology, 30 (1), 22–33doi: 10.1016/j.tim.2021.04.002.
Journal Article
Schulze-Niemand, E., Naumann, M., & Stein, M. (2022)Substrate‐assisted activation and selectivity of the bacterial RavD effector deubiquitinylaseProteins: Structure, Function, and Bioinformatics, 90 (4), 947–958doi: 10.1002/prot.26286.
2021
Journal Article
Schulze-Niemand, E., Naumann, M., & Stein, M. (2021)The Activation and Selectivity of the Legionella RavD DeubiquitinaseFrontiers in Molecular Biosciences, 8, 770320doi: 10.3389/fmolb.2021.770320.
2020
Journal Article
Creutznacher, R., Schulze, E., Wallmann, G., Peters, T., Stein, M., & Mallagaray, A. (2020)Chemical-Shift Perturbations Reflect Bile Acid Binding to Norovirus Coat Protein - Recognition Comes in Different FlavorsChemBioChem: A European Journal of Chemical Biology, 21 (7), 1007–1021doi: 10.1002/cbic.201900572.
2018
Journal Article
Schulze, E. & Stein, M. (2018)Simulation of Mixed Self-Assembled Monolayers on Gold: Effect of Terminal Alkyl Anchor Chain and Monolayer CompositionThe Journal of Physical Chemistry B, 122, 7699–7710doi: 10.1021/acs.jpcb.8b05075.
2017
Journal Article
Edler, E., Schulze, E., & Stein, M. (2017)Membrane localization and dynamics of geranylgeranylated Rab5 hypervariable regionBiochimica et Biophysica Acta (BBA) - Biomembranes, 1859 (8), 1335–1349doi: 10.1016/j.bbamem.2017.04.021.
2015
Journal Article
Hylton, R., Tizzard, G. J., Threlfall, T. L., Ellis, A. L., Coles, S. J., Seaton, C. C., Schulze, E., Lorenz, H., Seidel-Morgenstern, A., Stein, M., & Price, S. L. (2015)Are the crystal structures of enantiopure and racemic mandelic acids determined by kinetics or thermodynamics?Journal of the American Chemical Society, 137 (34), 11095–11104doi: 10.1021/jacs.5b05938.

Talk (3)

2022
Talk
Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne-1Presented at: 17th German Conference on Cheminformatics and EuroSAMPL Satellite WorkshopGarmisch-Partenkirchen, Germany, May 8, 2022.
2017
Talk
Schulze, E. & Stein, M.Conformational dynamics of glycoproteinsPresented at: 31st Molecular Modeling Workshop 2017Erlangen, Germany, March 27, 2017.
Talk
Schulze, E. & Stein, M.Molecular Dynamics and Markov State Modelling of OL93 N-Glycosylated ProteinsPresented at: 19th EUROCARB: European Carbohydrate SymposiumBarcelona, Spain, July 2, 2017.

Poster (16)

2023
Poster
Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Structural dynamics of K11-linked selective deubiquitylase Cezanne-1Presented at: Deubiquitylases and Ubl-proteasesEdinburgh, UK, June 19, 2023.
Poster
Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Structural Dynamics of the K11-linked Selective Deubiquitinase Cezanne-1Presented at: CSC Spring School in Computational Chemistry 2023Espoo, Finland, April 26, 2023.
2022
Poster
Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne‐1Presented at: Hybrid Workshop "Computer Simulation and Therory of Macromolecules"Hünfeld, Germany, April 8, 2022.
Poster
Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne-1Presented at: Konferenz XI. ZOMESMagdeburg, Germany, August 31, 2022.
Poster
Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne-1Presented at: EMBO Workshop - Ubiquitin and ubiquitin-like proteins in health and diseasesCavtat, Croatia, September 9, 2022.
2019
Poster
Schulze, E. & Stein, M.Ensemble-based docking and uncertainties from MD refinement of weak binders: The case of bile acids and the Norovirus receptor domainPresented at: EUROPIN Summer School of Drug Design - ViennaVienna, Austria, September 15, 2019.
Poster
Schulze, E. & Stein, M.Ensemble-based docking and uncertainties from MD refinement of weak binders: The case of bile acids and the Norovirus receptor domainPresented at: Computational Advances in Drug DiscoverySestri Levante, Italy, September 23, 2019.
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