Publications of Metehan Ilter

Ilter, M., Escorcia Cabrera, A., Schulze-Niemand, E., Naumann, M., & Stein, M. (2025)Activation and Reactivity of the Deubiquitinylase OTU Cezanne-2 from MD Simulations and QM/MM CalculationsJournal of Chemical Information and Modeling, 65 (2), 921–936doi: 10.1021/acs.jcim.4c01964.

Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M. (2023)Structural Dynamics of Lys11-Selective Deubiquitinylase Cezanne-1 during the Catalytic CycleJournal of Chemical Information and Modeling, 63 (7), 2084–2094doi: 10.1021/acs.jcim.2c01281.

Ilter, M. & Stein, M.Complex Activation and Catalytic Cycles of Deubiquitinylase EnzymesPresented at: 94th Annual Meeting of the International Association of Applied Mathematics and Mechanics (GAMM)Magdeburg, Germany, March 18, 2024.

Stein, M., Schulze-Niemand, E., Ilter, M., & Naumann, M.Control and regulation of NF-κB signaling by deubiquitinylasesPresented at: EU COST Action ProteoCure Annual MeetingZagreb, Croatia, June 12, 2023.

Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne-1Presented at: 17th German Conference on Cheminformatics and EuroSAMPL Satellite WorkshopGarmisch-Partenkirchen, Germany, May 8, 2022.

Ilter, M., Escorcia Cabrera, A. M., & Stein, M.Exploration of the Chemical Reaction Space of Cezanne-2 through MD and QM/MMPresented at: CCSC 2024 – Chemical Compound Space ConferenceHeidelberg, Germany, May 21, 2024.

Ilter, M., Escorcia Cabrera, A. M., & Stein, M.Unveiling the Catalytic Mechanism of Cezanne-2: Insights from MD and QM/MM SimulationsPresented at: 60th Symposium on Theoretical ChemistryBrunswig, Germany, September 2, 2024.

Ilter, M., Schulze-Niemand, E., & Stein, M.Exploring the Multi-Stage Catalytic Cycle of Cezanne-1 through MD SimulationsPresented at: 36th Molecular Modelling WorkshopErlangen, Germany, March 4, 2024.

Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Structural dynamics of K11-linked selective deubiquitylase Cezanne-1Presented at: Deubiquitylases and Ubl-proteasesEdinburgh, UK, June 19, 2023.

Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Structural Dynamics of the K11-linked Selective Deubiquitinase Cezanne-1Presented at: CSC Spring School in Computational Chemistry 2023Espoo, Finland, April 26, 2023.

Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne‐1Presented at: Hybrid Workshop "Computer Simulation and Therory of Macromolecules"Hünfeld, Germany, April 8, 2022.

Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne-1Presented at: Konferenz XI. ZOMESMagdeburg, Germany, August 31, 2022.

Ilter, M., Schulze-Niemand, E., Naumann, M., & Stein, M.Conformational Transitions in the Catalytic Cycle of Cezanne-1Presented at: EMBO Workshop - Ubiquitin and ubiquitin-like proteins in health and diseasesCavtat, Croatia, September 9, 2022.