Publications of Michael Ederer

Ederer, M., Steinsiek, S., Stagge, S., Rolfe, M. D., TerBeek, A., Knies, D., Teixeira de Mattos, M. J., Sauter , T., Green , J., Poole, R. K., Bettenbrock, K., & Sawodny, O. (2014)A mathematical model of metabolism and regulation provides a systems-level view of how Escherichia coli responds to oxygenFrontiers in Microbiology, 5, 124doi: 10.3389/fmicb.2014.00124.

Henkel, S., Beek, A. T., Steinsiek, S., Stagge, S., Bettenbrock, K., M. Joost Teixeira de Mattos, M., Sawodny, O., Ederer, M., & Sauter, T. (2014)Basic Regulatory Principles of Escherichia coli's Electron Transport Chain for Varying Oxygen ConditionsPLoS One, 9 (9), e107640doi: 10.1371/journal.pone.0107640.

Schlatter, R., Schmich, K., Avalos Vizcarra, I., Scheurich, P., Sauter, T., Borner, C., Ederer, M., Merfort, I., & Sawodny, O. (2009)ON/OFF and Beyond - A Boolean Model of ApoptosisPLoS Computational Biology, 5 (12), e1000595doi: 10.1371/journal.pcbi.1000595.

Ederer, M. & Gilles, E. D. (2008)Thermodynamic Constraints in Kinetic Modeling: Thermodynamic-Kinetic Modeling in Comparison to Other ApproachesEngineering in Life Sciences, 8 (5), 467–476doi: 10.1002/elsc.200800040.

Feuer, R., Ederer, M., Gilles, E. D., Sprenger, G. A., Sawodny, O., & Sauter, T. (2008)Analyse der evolutiven Adaptation am Beispiel einer pyruvat-auxotrophen Escherichia coli-Mutanteat - Automatisierungstechnik, 56 (5), 257–268doi: 10.1524/auto.2008.0704.

Ederer, M. & Gilles, E. D. (2007)Thermodynamically feasible kinetic models of reaction networksBiophysical Journal, 92 (6), 1846–1857doi: 10.1529/biophysj.106.094094.

Koschorreck, M., Conzelmann, H., Ebert, S., Ederer, M., & Gilles, E. D. (2007)Reduced modeling of signal transduction - a modular approachBMC Bioinformatics, 8, 336doi: 10.1186/1471-2105-8-336.

Ederer, M. & Gilles, E. D. (2007)Thermodynamic-Kinetic Modeling and Electrical EngineeringIn: Proceedings / 2nd Conference Foundations of Systems Biology in Engineering, 135–140.

Feuer, R., Ederer, M., Trachtmann, N., Sauter, T., Gilles, E. D., Sprenger, G., & Sawodny, O. (2007)Methods for analysis of evolutive adaptation of E. coliIn: Proceedings of SICE annual conference, 1359–1365doi: 10.1109/SICE.2007.4421194.

Kremling, A., Sauter, T., Bullinger, E., Ederer, M., Allgöwer, F., & Gilles, E. D. (2001)Biosystems Engineering: Applying methods from systems theory to biological systemsIn: Proceedings of the Second International Conference on Systems Biology, 282–290.

Ederer, M. & Gilles, E. D.Thermodynamic-Kinetic Modeling of Complex Formation in Signal TransductionPresented at: 9th International Conference on Systems Biology (ICSB 2008)Göteborg, Sweden, August 22, 2008.

Ederer, M. & Gilles, E. D.Thermodynamic-Kinetic ModelingPresented at: 2nd International Symposium on BiothermodynamicsFrankfurt am Main, Germany, February 21, 2008.

Ederer, M., Sauter, T., Bettenbrock, K., Sawodny, O., & Gilles, E. D.Thermodynamically-Consistent Reduced-Order Modeling of the Oxygen Response of Escherichia coliPresented at: 9th International Conference on Systems Biology (ICSB 2008)Göteborg, Sweden, August 22, 2008.

Steinsiek, S., Stagge, S., Bettenbrock, K., Ederer, M., Sawodny, O., & Gilles, E. D.Metabolism-Wide Oxygen Responses: Experimental and Modelling ApproachesPresented at: SysMo - Evaluation ConferenceBad Honnef, Germany, June 30, 2008.

Ederer, M. (2009)Thermokinetic Modeling and Model Reduction of Reaction NetworksPhD Thesis, Universität, Stuttgartdoi: 10.18419/opus-4294.