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Franke, R.; Mueller, M.; Wundrack, N.; Gilles, E. D.; Klamt, S.; Kaehne, T.; Naumann, M.: Host-pathogen systems biology: Logical modelling of hepatocyte growth factor and Helicobacter pylori induced c-Met signal transduction. BMC Systems Biology 2, 4 (2008)

Gangadwala, J.; Radulescu, G.; Kienle, A.; Steyer, F.; Sundmacher, K.: New processes for recovery of acetic acid from waste water. Clean Technology & Environmental Policy 3, pp. 245 - 254 (2008)

Glöckner, G.; Golderer, G.; Werner-Felmayer, G.; Meyer, S.; Marwan, W.: A first glimpse at the transcriptome of Physarum polycephalum. BMC Genomics 9, 6 (2008)

Heidebrecht, P.; Hertel, C.; Sundmacher, K.: Conceptual Analysis of a Cyclic Water Gas Shift Reactor. International Journal of Chemical Reactor Engineering 6, p. A 19 (2008)

Klamt, S.; Grammel, H.; Straube, R.; Ghosh, R.; Gilles, E. D.: Modeling the electron transport chain of purple non-sulfur bacteria. Molecular Systems Biology 4, 156 (2008)

Koschorreck, M.; Gilles, E. D.: Mathematical modeling and analysis of insulin clearance in vivo. BMC Systems Biology 2, p. 43 (2008)

Koschorreck, M.; Gilles, E. D.: ALC: automated reduction of rule-based models. BMC Systems Biology 2, 91 (2008)

Kremling, A.: Modellierung und Modellanalyse in der Systembiologie am Beispiel der Kohlenhydrataufnahme bei Escherichia coli. at - Automatisierungstechnik 56 (5), pp. 250 - 256 (2008)

Lu, H.; Rihko-Struckmann, L.; Hanke-Rauschenbach, R.; Sundmacher, K.: Dynamic Behavior of a PEM Fuel Cell during Electrochemical CO Oxidation on a PtRu Anode. Topics in Catalysis 51, pp. 89 - 97 (2008)

Reger, J.; Jouffroy, J.: Algebraische Ableitungsschätzung im Kontext der Rekonstruierbarkeit. at - Automatisierungstechnik 6 (56), pp. 324 - 331 (2008)

Schulze-Horsel, J.; Genzel, Y.; Reichl, U.: Flow cytometric monitoring of influenza A virus infection in MDCK cells during vaccine production. BMC Biotechnology 8, p. 45 (2008)

Sewekow, E.; Keßler, L. C.; Seidel-Morgenstern, A.; Rothkoetter, H.-J.: Isolation of soy bean protein P34 from oil bodies using hydrophobic interaction chromatography. BMC Biotechnology 8, p. 27 (2008)

Wahl, S. A.; Nöh, K.; Wiechert, W.: 13C labeling experiments at metabolic nonstationary conditions: an exploratory study. BMC Bioinformatics 9, p. 152 (2008)

Beste, D. J.; Hooper, T.; Stewart, G.; Bonde, B.; Avignone-Rossa, C.; Bushell, M. E.; Wheeler, P.; Klamt, S.; Kierzek, A. M.; McFadden, J.: GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism. Genome Biology 8, R89 (2007)

Klamt, S.; Saez-Rodriguez, J.; Gilles, E. D.: Structural and functional analysis of cellular networks with CellNetAnalyzer. BMC Systems Biology 1, 2 (2007)

Koschorreck, M.; Conzelmann, H.; Ebert, S.; Ederer, M.; Gilles, E. D.: Reduced modeling of signal transduction - a modular approach. BMC Bioinformatics 8, 336 (2007)

Kremling, A.; Bettenbrock, K.; Gilles, E. D.: Analysis of global control of Escherichia coli carbohydrate uptake. BMC Systems Biology 1, 42 (2007)

Lorenz, H.; Czapla, F.; Polenske, D.; Elsner, M. P.; Seidel-Morgenstern, A.: Crystallization based separation of enantiomers (Review). Journal of the University of Chemical Technology and Metallurgy 42 (1), pp. 5 - 16 (2007)

Noack, S.; Wahl, A.; Qeli, E.; Wiechert, W.: Visualizing Regulatory Interactions in Metabolic Networks. BMC Biology 5, p. 46 (2007)

Saez-Rodriguez, J.; Simeoni, L.; Lindquist, J.; Hemenway, R.; Bommhardt, U.; Arndt, B.; Haus, U. U.; Weismantel, R.; Gilles, E. D.; Klamt, S. et al.; Schraven, B.: A logical model provides insights into T cell receptor signaling. PLoS Computational Biology 3, e163 (2007)