Publications of Marcus Pioch

Kawahara, R.; Chernykh, A.; Alagesan, K.; Bern, M.; Cao, W.; Chalkley, R. J.; Cheng, K.; Choo, M. S.; Edwards, N.; Goldman, R. et al.; Hoffmann, M.; Hu, Y.; Huang, Y.; Kim, J. Y.; Kletter, D.; Liquet, B.; Liu, M.; Mechref, Y.; Meng, B.; Neelamegham, S.; Nguyen-Khuong, T.; Nilsson, J.; Pap, A.; Park, G. W.; Parker, B. L.; Pegg, C. L.; Penninger, J. M.; Phung, T. K.; Pioch, M.; Rapp, E.; Sakalli, E.; Sanda, M.; Schulz, B. L.; Scott, N. E.; Sofronov, G.; Stadlmann, J.; Vakhrushev, S. Y.; Woo, C. M.; Wu, H.-Y.; Yang, P.; Ying, W.; Zhang, H.; Zhang, Y.; Zhao, J.; Zaia, J.; Haslam, S. M.; Palmisano, G.; Yoo, J. S.; Larson, G.; Khoo, K.-H.; Medzihradszky, K. F.; Kolarich, D.; Packer, N. H.; Thaysen-Andersen, M.: Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis. Nature Methods 18, pp. 1304 - 1316 (2021)

Pralow, A.; Hoffmann, M.; Nguyen-Khuong, T.; Pioch, M.; Hennig, R.; Genzel, Y.; Rapp, E.; Reichl, U.: Comprehensive N‐glycosylation analysis of the influenza A virus proteins HA and NA from adherent and suspension MDCK cells. The FEBS Journal 288 (16), pp. 4869 - 4891 (2021)

Hoffmann, M.; Pioch, M.; Pralow, A.; Hennig, R.; Kottler, R.; Reichl, U.; Rapp, E.: The Fine Art of Destruction: A Guide to In-Depth Glycoproteomic Analyses – Exploiting the Diagnostic Potential of Fragment Ions. Proteomics 18 (24), e1800282 (2018)

Pioch, M.; Hoffmann, M.; Pralow, A.; Reichl, U.; Rapp, E.: GlyXtool^MS: An Open-Source Pipeline for Semiautomated Analysis of Glycopeptide Mass Spectrometry Data. Analytical Chemistry 90 (20), pp. 11908 - 11916 (2018)

Hoffmann, M.; Bartels, M.F.; Hennig, R.; Pioch, M.; Reichl, U.; Strahl, S.; Rapp, E.: Unravelling the Interplay between Protein O-Mannosylation and N-Glycosylation-An N-Glycomic and N-Glycoproteomic Study of Human N-Cadherin. DFG FOR 2509 Kick-off Meeting, Heidleberg, Germany (2017)

Pioch, M.; Hoffmann, M.; Pralow, A.; Nguyen-Khuong, T.; Reichl, U.; Rapp, E.: glyXtool^MS-Towards Automated Analysis of Glycopeptide Mass Spectrometry Data. 5th Beilstein Glyco-Bioinformatics Symposium, Berlin, Germany (2017)

Pioch, M.; Hoffmann, M.; Pralow, A.; Reichl, U.; Rapp, E.: OpenSource toolbox for semi-automated analysis of glycopeptide mass spectrometry data. 5th Beilstein Glyco-Bioinformatics Symposium, Berlin, Germany (2017)

Pralow, A.; Nguyen-Khuong, T.; Pioch, M.; Hennig, R.; Hoffmann, M.; Rapp, E.; Reichl, U.: Structural and site-specific N-glycan analysis of influenza A/PR8/34 virus propagated in adherent and suspension MDCK cells. 28th Joint Glycobiology Meeting 2017, Aachen, Germany (2017)

Hoffmann, M.; Pioch, M.; Pralow, A.; Hennig, R.; Kottler, R.; Reichl, U.; Rapp, E.: The Fine Art of Destruction: A Guide to In-Depth Glycoproteomic Analyses - Exploiting the Diagnostic Potential of Fragment Ions. GlycoBioTec 2019, Berlin, Germany (2019)

Pralow, A.; Hoffmann, M.; Pioch, M.; Hennig, R.; Nguyen-Khuong, T.; Genzel, Y.; Rapp, E.; Reichl, U.: Comprehensive N-glycosylation analysis of influenza A virus antigens derived from different production cell lines reveal immunogenic glycan epitopes. GlycoBioTec 2019, Berlin, Germany (2019)

Hoffmann, M.; Bartels, M.F.; Noor, S.I.; Hennig, R.; Pioch, M.; Reichl, U.; Strahl, S.; Rapp, E.: Unravelling the Interplay between Protein O-Mannosylation and N-Glycosylation - A Glycomic and Glycoproteomic Study of Human N-Cadherin. DFG FOR 2509 Meeting, Höchst (Odenwald), Germany (2018)

Hoffmann, M.; Bartels, M.F.; Hennig, R.; Pioch, M.; Reichl, U.; Strahl, S.; Rapp, E.: Unravelling the Interplay between Protein O-Mannosylation and N-Glycosylation-An N-Glycomic and N-Glycoproteomic Study of Human N-Cadherin. DFG FOR 2509 Kick-off Meeting, Heidleberg, Germany (2017)

Hoffmann, M.; Pioch, M.; Pralow, A.; Nguyen-Khuong, T.; Hennig, R.; Kottler, R.; Reichl, U.; Rapp, E.: Site-Specific N-and O-Glycoproteomic Analysis Using Stepped Collisional Energy Fragmentation on a Linear Iontrap/ Orbitrap Hybrid Mass Spectrometer. GlycoBioTec Symposium 2017, Berlin, Germany (2017)

Pralow, A.; Nguyen-Khuong, T.; Pioch, M.; Hennig, R.; Hoffmann, M.; Rapp, E.; Reichl, U.: Comprehensive structural and site-specific N-glycan analysis of influenza A/PR8/34 virus propagated in adherent and suspension MDCK cells. GlycoBioTec Symposium 2017, Berlin, Germany (2017)

Kawahara, R.; Chernykh, A.; Alagesan, K.; Bern, M.; Cao, W.; Chalkley, R. J.; Cheng, K.; Choo, M. S.; Edwards, N.; Goldman, R. et al.; Hoffmann, M.; Hu, Y.; Huang, Y.; Kim, J. Y.; Kletter, D.; Liquet-Weiland, B.; Liu, M.; Mechref, Y.; Meng, B.; Neelamegham, S.; Nguyen-Khuong, T.; Nilsson, J.; Pap, A.; Park, G. W.; Parker, B. L.; Pegg, C. L.; Penninger, J. M.; Phung, T. K.; Pioch, M.; Rapp, E.; Sakalli, E.; Sanda, M.; Schulz, B. L.; Scott, N. E.; Sofronov, G.; Stadlmann, J.; Vakhrushev, S. Y.; Woo, C. M.; Wu, H.-Y.; Yang, P.; Ying, W.; Zhang, H.; Zhang, Y.; Zhao, J.; Zaia, J.; Haslam, S. M.; Palmisano, G.; Yoo, J. S.; Larson, G.; Khoo, K.-H.; Medzihradszky , K. F.; Kolarich, D.; Packer, N. H.; Thaysen-Andersen, M.: Community Evaluation of Glycoproteomics Informatics Solutions Reveals High-Performance Search Strategies of Serum N- and O-Glycopeptide Data. bioRxiv (2021)