Publications of Dirk Benndorf

Benndorf, D.; Jach, M.; Klamt, S.; Reichl, U.: Systembiologie-Ausbildung von Anfang an. Systembiologie.de (2), pp. 82 - 84 (2010)

Roma-Rodriguesa, C.; Santosa, P.; Benndorf, D.; Rapp, E.; Sá-Correiaa, I.: Response of Pseudomonas putida KT2440 to phenol at the level of membrane proteome. Proteomics 73 (8), pp. 1461 - 1478 (2010)

Heyer, R.; Schallert, K.; Briza, M.; Benndorf, D.: Metaproteomic Analysis of Biogas Plants: A Complete Workflow from Lab to Bioinformatics. In: Metaproteomics: Methods in Molecular Biology, pp. 99 - 113 (Ed. Salerno, C.). Humana Press, New York, NY (2024)

Zoun, R.; Schallert, K.; Broneske, D.; Trifonova, I.; Chen, X.; Heyer, R.; Benndorf, D.; Saake, G.: Efficient transformation of protein sequence databases to columnar index schema. In: Database and Expert Systems Applications. DEXA 2019, pp. 67 - 72 (Ed. Anderst-Kotsis , G.). DEXA: International Conference on Database and Expert Systems Applications , Linz, Austria, August 26, 2019 - August 29, 2019. Springer, Cham, Switzerland (2019)

Zoun, R.; Campero Durand, G.; Schallert , K.; Patrikar, A.; Broneske, D.; Fenske, W.; Heyer, R.; Benndorf, D.; Saake, G.: Protein Identification as a Suitable Application for Fast Data Architecture. DEXA : International Conference on Database and Expert Systems Applications , Regensburg, Germany, September 03, 2018 - September 06, 2018. Database and Expert Systems Applications: DEXA 2018 International Workshops BDMICS, BIOKDD, and TIR 903, pp. 168 - 178 (2018)

Kuhn, R.; Benndorf, D.; Rapp, E.; Reichl, U.; Pollice, A.; Palese, L.: Metaproteomanalyse von Klärschlamm aus Membranbioreaktoren. In Chemie Ingenieur Technik, 82 (9 - Special Issue: ProcessNet-Jahrestagung 2010 und 28. Jahrestagung der Biotechnologen), pp. 1539 - 1540 . Processet-Jahrestagung 2010 und 28. Jahrestagung der Biotechnologen, Aachen, Germany, September 21, 2010 - September 23, 2010. Verlag Chemie, GmbH, Weinheim, Germany (2010)

Hellwig, P.; Kautzner, D.; Benndorf, D.; Reichl, U.: Identification of newly synthesized proteins in microbial communities using BONCAT and click chemistry. 5^th International Metaproteomics Symposium, Avignon (France) (2023)

Küchler, J.; Opitz, P.; Rüdiger, D.; Kupke, S. Y.; Genzel, Y.; Benndorf, D.; Reichl, U.: Absolute quantification of influenza A virus proteins during single-round replication in different host cells. 6^th Workshop on Virus Dynamics, Nagoya (Japan) (2023)

Khesali Aghtaei, H.; Benndorf, D.; Reichl, U.: Biological methanation using a tubular foam bioreactor. Smart Process Systems Engineering 2022 Towards Sustainable & Circular Production Processes (SmartProSys 2022), Magdeburg, Germany (2022)

Khesali Aghtaei, H.; Benndorf, D.; Sczyrba, A.; Reichl, U.: Adaptation of a methanogenic community to demand-oriented biological methanation. 4th International Metaproteomics Symposium, Luxembourg, Luxembourg (2022)

Hellwig, P.; Benndorf, D.; Reichl, U.: Combined metagenomics and metaproteomics of a two-stage biogas plant questions the benefit of the hydrolysis fermenter for process performance. 4th International Metaproteomics Symposium, Luxembourg, 2021, Luxembourg, Luxembourg (2021)

Khesali Aghtaei, H.; Benndorf, D.; Reichl, U.: Adaptation of a microbial community to demand-oriented biological methanation. V. International Conference on Monitoring & Process Control of Anaerobic Digestion Processes, virtual (2021)

Benndorf, D.: Was kann die Proteomik zur Klärung des Biogas-Metabolismus leisten? Abschlusssymposium des FNR/BMEL-Verbundvorhabens Modisto „Dynamik des Intermediat-Stoffwechsels in Biogasprozessen“, Virtual Meeting (2020)

Benndorf, D.: Recent experimental and bioinformatic developments in metaproteomics. Metaproteomics - The Gateway to Microbial Commmunity Structure-Function Analysis, Sheffield, UK (2019)

Heyer, R.; Biermann, R.; Isermann, B.; Lehmann, T.; Buss, E.; Schallert, K.; Vilchez-Vargas, R.; Sydor, S.; Link, A.; Canbay, A. et al.; Reichl, U.; Benndorf, D.: System diagnostics of the human gut microbiome using metaproteome analysis of fecal samples. Deutscher Kongress für Laboratoriumsmedizin, Magdeburg, Germany (2019)

Heyer, R.; Schallert, K.; Püttker, S.; Kohrs, F.; Hellwig, P.; Theuerl, S.; Schlüter, A.; Reichl, U.; Benndorf, D.: Identification of process parameters shaping microbial communities in biogas plants using large scale metaproteome analysis. Annual Conference of the Association for General and Applied Microbiology (VAAM), Mainz, Germany (2019)

Khesali, H.; Amirhossein, A.; Benndorf, D.; Reichl, U.: Biological conversion of CO2 from a biogas plant to CH4. Young Professionals Conference on Process Engineering (YCOPE 2019), Magdeburg (2019)

Benndorf, D.: Speedup of metaproteomics pipelines - from samples to microbial community data in less than 24 hours. 3rd International Metaproteome Symposium, Leipzig, Germany (2018)

Heyer, R.; Kohrs, F.; Benndorf, D.; Schallert, K.; deVrieze, J.; Rapp, E.; Reichl, U.: Proteotyping enables grouping and classification of biogas plant microbiomes. Proteomic Forum 2017, Potsdam, Germany (2017)

Heyer, R.; Schallert, K.; Kohrs, F.; Benndorf, D.; Rapp, E.; Reichl, U.: Function of the different microbial groups within the biogas process and their dependence on process parameters. 3rd International Conference on Biogas Microbiology (ICBM-3), Wageningen, The Netherlands (2017)