Publications of Wolfgang Marwan
10 (2), pp. 639 - 654 (2011)Petri nets as a framework for the reconstruction and analysis of signal transduction pathways and regulatory networks. Natural Computing
11, 115 (2010)Transcriptomic changes arising during light-induced sporulation in Physarum polycephalum. BMC Genomics
26 (7), pp. 974 - 975 (2010)Snoopy - a unifying Petri net framework to investigate biomolecular networks. Bioinformatics
4, 27 (2010)A predictive computational model of the kinetic mechanism of stimulus-induced transducer methylation and feedback regulation through CheY in archaeal phototaxis and chemotaxis. BMC Systems Biology
80, 023709 (2009)Quantitative analysis of signal transduction in motile and phototactic cells by computerized light stimulation and model based tracking. Review of Scientific Instruments
9, 6 (2008)A first glimpse at the transcriptome of Physarum polycephalum. BMC Genomics
384 (1), pp. 1 - 8 (2008)Flagellar Rotation in the Archaeon Halobacterium salinarum Depends on ATP. Journal of Molecular Biology
BioModel Engineering with Petri Nets. In: Algebraic and Discrete Mathematical Methods for Modern Biology, pp. 141 - 192. Elsevier, San Diego, USA (2015)
724, pp. 117 - 134 (Eds. Heiner, M.; Hiroshi, M.). International Workshop on Biological Processes & Petri Nets (BioPPN-2011), Newcastle upon Tyne, UK, June 20, 2011 - June 24, 2011. (2011)Pain Signaling - A Case Study of the Modular Modeling Voncept with Prospect to a Protein-Oriented Modeling Platform. In: Proceedings of the International Workshop on Biological Processes & Petri Nets, Vol.
643, pp. 42 - 50 (Eds. Schwarick, M.; Heiner, M.). 17th German Workshop on Algorithms and Tools for Petri Nets (AWPN 2010), Cottbus, October 07, 2010 - October 08, 2010. (2010)Modular and hierarchical modelling concept for large biological Petri nets applied to nociception. In: Proceedings of the 17th German Workshop on Algorithms and Tools for Petri Nets, Vol.
A coherent kinetic model of sensing and response in halobacterium salinarium phototaxis based on the mechanism of flagellar motor switching. In: Bioinformatics of genome regulation and structure, pp. 113 - 116. The Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004), Novosibirsk, Russia, July 25, 2004 - July 30, 2004. (2004)
Petri net modeling of cellular signal transduction based on a stochastic version of Snoopy. The 6th Conference on Computational Methods in Systems Biology, Rostock, Germany (2008)