Publications of Former Research Groups

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Journal Article (25)

  1. Journal Article
    Liu, X.; Reitsma, J. M.; Mamrosh, J. L.; Zhang, Y.; Straube, R.; Deshaies, R. J.: Cand1-Mediated Adaptive Exchange Mechanism Enables Variation in F-Box Protein Expression. Molecular Cell 69 (5), pp. 773 - 786 (2018)
  2. Journal Article
    Straube, R.: Analysis of network motifs in cellular regulation: Structural similarities, input–output relations and signal integration. Biosystems 162, pp. 2015 - 232 (2017)
  3. Journal Article
    Straube, R.; Shah, M.; Flockerzi, D.; Wolf, D.A.: Trade-off and flexibility in the dynamic regulation of the cullin-RING ubiquitin ligase repertoire. PLoS Computational Biology 13 (11), e1005869 (2017)
  4. Journal Article
    Zander, D.; Samaga, D.; Straube, R.; Bettenbrock, K.: Bistability and Nonmonotonic Induction of the lac Operon in the Natural Lactose Uptake System. Biophysical Journal 112 (9), pp. 1984 - 1996 (2017)
  5. Journal Article
    Straube, R.: Analysis of Substrate Competition in Regulatory Network Motifs: Stimulus-Response Curves, Thresholds and Ultrasensitivity. Journal of Theoretical Biology 380, pp. 74 - 82 (2015)
  6. Journal Article
    Straube, R.: Reciprocal Regulation as a Source of Ultrasensitivity in Two-Component Systems with a Bifunctional Sensor Kinase. PLoS Computational Biology 10 (5), p. e1003614 (2014)
  7. Journal Article
    Straube, R.; Conradi, C.: Reciprocal Enzyme Regulation as a Source of Bistability in Covalent Modification Cycles. Journal of Theoretical Biology 330, pp. 56 - 74 (2013)
  8. Journal Article
    Straube, R.: Sensitivity and Robustness in Covalent Modification Cycles with a Bifunctional Converter Enzyme. Biophysical Journal 105 (8), pp. 1925 - 1933 (2013)
  9. Journal Article
    Pandey, R.; Flockerzi, D.; Hauser, M. J. B.; Straube, R.: An extended model for the repression of photosynthesis genes by the AppA/PpsR system in Rhodobacter sphaeroides. FEBS Journal 279 (18), pp. 3449 - 3461 (2012)
  10. Journal Article
    Straube, R.: Comment on "Load-induced modulation of signal transduction networks": Reconciling ultrasensitivity with bifunctionality? Science Signaling 5 (205), p. Ic1 (2012)
  11. Journal Article
    Pandey, R.; Flockerzi, D.; Hauser, M.; Straube, R.: Modeling the Light- and Redox-Dependent Interaction of PpsR/AppA in Rhodobacter sphaeroides. Biophysical Journal 100 (10), pp. 2347 - 2355 (2011)
  12. Journal Article
    Wei, F.; Yang, D.; Straube, R.; Shuai, J.: Brownian diffusion of ion channels in different membrane patch geometries. Physical review E 83 (2), p. 021919 (2011)
  13. Journal Article
    Cheviakov, A. F.; Ward, M. J.; Straube, R.: An Asymptotic Analysis of the Mean First Passage Time for Narrow Escape Problems: Part II: The Sphere. SIAM Multiscale Modeling and Simulation 8 (3), pp. 836 - 870 (2010)
  14. Journal Article
    Straube, R.; Vermeer, S.; Nicola, E. M.; Mair, T.: Inward Rotating Spiral Waves in Glycolysis. Biophysical Journal 99 (1), pp. L4 - L6 (2010)
  15. Journal Article
    Straube, R.; Nicola, E. M.: Diffusive coupling can discriminate between similar reaction mechanisms in an allosteric enzyme system. BMC Systems Biology 4, 165 (2010)
  16. Journal Article
    Coombs, D.; Straube, R.; Ward, M. J.: Diffusion on a Sphere with Localized Traps: Mean First Passage Time, Eigenvalue Asymptotics, and Fekete Points. SIAM Journal on Applied Mathematics 70 (1), pp. 302 - 332 (2009)
  17. Journal Article
    Straube, R.; Ward, M. J.: An asymptotic analysis of intracellular signaling gradients arising from multiple small compartments. SIAM Journal on Applied Mathematics 70 (1), pp. 248 - 269 (2009)
  18. Journal Article
    Straube, R.; Ridgway, D.: Investigating the effects of molecular crowding on Ca2+ Diffusion using a particle-based simulation model. Chaos 19 (3), 037110 (2009)
  19. Journal Article
    Bagyan, S.; Mair, T.; Suchorski, Y.; Hauser, M. J. B.; Straube, R.: Spatial Desynchronization of Glycolytic Waves as Revealed by Karhunen−Loeve Analysis. Journal of Physical Chemistry B 112 (45), pp. 14334 - 14341 (2008)
  20. Journal Article
    Klamt, S.; Grammel, H.; Straube, R.; Ghosh, R.; Gilles, E. D.: Modeling the electron transport chain of purple non-sulfur bacteria. Molecular Systems Biology 4, 156 (2008)
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