Publications of Katrin Kolczyk

Kolczyk, K.; Conradi, C.: Challenges in horizontal model integration. BMC Systems Biology (10), 28 (2016)

Kolczyk, K.; Samaga, R.; Conzelmann, H.; Mirschel, S.; Conradi, C.: The Process-Interaction-Model: a common representation of rule-based and logical models allows studying signal transduction on different levels of detail. BMC Bioinformatics 13, 251 (2012)

Mirschel, S.; Steinmetz, K.; Rempel, M.; Ginkel, M.; Gilles, E. D.: ProMoT: Modular Modeling for Systems Biology. Bioinformatics 25 (5), pp. 687 - 689 (2009)

Mirschel, S.; Steinmetz, K.; Kremling, A.: Two different approaches for modeling biochemical reaction networks with ProMoT. In: Proceedings / MATHMOD 09: 6th Vienna Conference on Mathematical Modelling, Vol. 35, pp. 2322 - 2330 (Eds. Troch, I.; Breitenecker, F.). Mathmod 2009 - 6th Vienna International Conference on Mathematical Modelling, Vienna, Austria, February 11, 2009 - February 13, 2009. (2009)

Steinmetz, K.: ProMoT: A tool for structured and modular modeling. ZBIT-Colloquium, University of Tübingen, Centre for Bioinformatics, Germany (2009)

Kolczyk, K.; Mirschel, S.; Rempel, M.; Gilles, E. D.: Modular Modeling with ProMoT in Systems Biology. German Conference on Bioinformatics, Halle (Saale), Germany (2009)

Mirschel, S.; Steinmetz, K.; Rempel, M.; Gilles, E. D.: Modular modeling with ProMoT. German Symposium On Systems Biology 2009, Heidelberg, Germany (2009)

Rempel, M.; Mirschel, S.; Steinmetz, K.; Gilles, E. D.: Model Integration of Modular Models using Promot. German Symposium on Systems Biology 2009, Heidelberg (2009)

Steinmetz, K.; Mirschel, S.; Rempel, M.; Ginkel, M.; Gilles, E. D.: Structured and modular modeling with ProMoT. 1st FORSYS Symposium, Berlin, Germany (2008)

Steinmetz, K.; Samaga, R.; Ginkel, M.; Gilles, E. D.: User support in visual editing for signaling and regulatory networks in ProMoT. Conference on Systems Biology of Mammalian Cells (SBMC08), Dresden, Germany (2008)