Journal Article (120)
2012
Journal Article
78 (20), pp. 7205 - 7215 (2012)
High-Level Production of the Industrial Product Lycopene by the Photosynthetic Bacterium Rhodospirillum rubrum. Applied and Environmental Microbiology 2011
Journal Article
193 (8), pp. 1893 - 1900 (2011)
Glutathione Redox Effect on Photosynthetic Membrane Expression in Rhodospirillum rubrum. Journal of Bacteriology
Journal Article
2218 (16), pp. 2232 - 2239 (2011)
Experimental validation of a new integrated simulated moving bed process for the production of single enantiomers. Journal of Chromatography A
Journal Article
5, p. 150 (2011)
Metabolic network modeling of redox balancing and biohydrogen production in purple nonsulfur bacteria. BMC Systems Biology
Journal Article
13 (2), pp. 204 - 213 (2011)
Computing complex metabolic intervention strategies using constrained minimal cut sets. Metabolic Engineering
Journal Article
105 (2), pp. 162 - 168 (2011)
An application programming interface for CellNetAnalyzer. Biosystems
Journal Article
100 (10), pp. 2347 - 2355 (2011)
Modeling the Light- and Redox-Dependent Interaction of PpsR/AppA in Rhodobacter sphaeroides. Biophysical Journal
Journal Article
7 (12), pp. 3253 - 3270 (2011)
Large-scale models of IL-1 and IL-6 signaling and their hepatocellular specification. Molecular BioSystems
Journal Article
154 (1), pp. 35 - 45 (2011)
Characterization of E. coli MG1655 and frdA and sdhC mutants at various aerobiosis levels. Journal of Biotechnology
Journal Article
83 (2), p. 021919 (2011)
Brownian diffusion of ion channels in different membrane patch geometries. Physical review E 2010
Journal Article
7 (1), p. 151 (2010)
From Binary to Multivalued to Continuous Models: The Iac Operon as a Case Study. Journal of Integrative Bioinformatics
Journal Article
147 (2), pp. 88 - 101 (2010)
CASOP: a computational approach for strain optimization aiming at high productivity. Journal of Biotechnology
Journal Article
26 (17), pp. 2160 - 2168 (2010)
TRANSWESD: inferring cellular networks with transitive reduction. Bioinformatics
Journal Article
17 (1), pp. 39 - 53 (2010)
Computing Combinatorial Intervention Strategies and Failure Modes in Signaling Networks. Journal of Computational Biology 2009
Journal Article
5 (5), p. e1000385 (2009)
Hypergraphs and cellular networks. PLoS Computational Biology
Journal Article
10, p. 181 (2009)
Computing Paths and Cycles in Biological Interaction Graphs. BMC Bioinformatics
Journal Article
2, pp. 125 - 138 (2009)
Logical network of genotoxic stress-induced NF-kB signal transduction predicts putative target structures for therapeutic intervention strategies. Advances and Applications in Bioinformatics and Chemistry
Journal Article
5, p. 331 (2009)
Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction. Molecular Systems Biology
Journal Article
5 (8), e1000438 (2009)
The logic of EGFR/ErbB signaling: theoretical properties and analysis of high-throughput data. PLoS Computational Biology
Journal Article
3, 98 (2009)
Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling. BMC Systems Biology Book Chapter (5)
2020
Book Chapter
77, pp. 37 - 88 (Ed. Poole, R. K.). Academic Press (2020)
Zymomonas mobilis metabolism: Novel tools and targets for its rational engineering. In: Advances in Microbial Physiology, Vol. 2014
Book Chapter
64, pp. 65 - 114 (Ed. Poole, R. K.). Elsevier/Academic Press, Amsterdam (2014)
Towards a Systems Level Understanding of the Oxygen Response of Escherichia coli. In: Advances in Microbial Physiology, Vol.
Book Chapter
Stoichiometric and Constraint-Based Analysis of Biochemical Reaction Networks. In: Large-Scale Networks in Engineering and Life Sciences, pp. 263 - 316. Springer International Publishing, Cham (2014)
2013
Book Chapter
Benchmarking a Simple Yet Effective Approach for Inferring Gene Regulatory Networks from Systems Genetic Data. In: Gene Network Inference: Verification of Methods for Systems Genetic Data., pp. 33 - 47. Springer, Heidelberg (2013)
Book Chapter
Host-pathogen interactions. In: Systems Biology of Tuberculosis, pp. 107 - 126. Springer, New York (2013)
Conference Paper (8)
2016
Conference Paper
Combination of Preferential Crystallization and Racemization – First Results. In: BIWIC 2016, 23rd International Workshop on Industrial Crystallization, pp. 173 - 178. BIWIC 2016 - 23rd International Workshop on Industrial Crystallization, Magdeburg, Germany, September 06, 2016 - September 08, 2016. Cuvillier, Göttingen (2016)
Conference Paper
Systembiologische Untersuchung bakterieller Stoffwechselnetzwerke und Enzyme für die technische Verwertung von CO. In: Technische Systeme für die Lebenswissenschaften, pp. 115 - 122. 18. Heiligenstädter Kolloquium, Heiligenstadt, September 19, 2016 - September 21, 2016. (2016)
2015
Conference Paper
48 (1), pp. 23 - 28 (2015)
A compact mathematical model of mandelate racemase production and chaperone overexpression in E. coli. 8th Vienna Interantional Conference on Mathematical Modelling , Vienna, Austria, February 18, 2015 - February 20, 2015. IFAC-PapersOnLine 2014
Conference Paper
Identifying network structures that can cause multistationarity. In: Proceedings of 21st International Symposium on Mathematical Theory of Networks and Systems, pp. 1548 - 1555. 21st International Symposium on Mathematical Theory of Networks and Systems, Groningen, Netherlands, July 07, 2014 - July 11, 2014. (2014)
2013
Conference Paper
On Bistability Causing Structures in Escherichia Coli’s Metabolism. In: Computational Methods in Systems Biology: 11th International Conference, CMSB 2013, pp. 276 - 277. 11th International Conference, CMSB 2013, Klosterneuburg, Österreich, September 22, 2014 - September 24, 2014. (2013)
Conference Paper
A fusion approach linking signaling logic and metabolic mass-flow kinetics in hepatocytes. In: Computational Methods in Systems Biology: 11th International Conference, CMSB 2013, pp. 255 - 256. 11th International Conference on Computational Methods in Systems Biology CMSB 13, Klosterneuburg, Austria, September 22, 2013 - September 24, 2013. (2013)
2012
Conference Paper
45 (2), pp. 326 - 330 (2012)
Multiscale Modeling of Biopolymer Production in Multicellular Systems. MATHMOD 2012 - 7th Vienna International Conference on Mathematical Modelling, Vienna, Austria, February 15, 2012 - February 17, 2012. IFAC Proceedings Volumes 2010
Conference Paper
CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networks. In: German Conference on Bioinformatics 2010, pp. 71 - 80 (Eds. Schomburg, D.; Grote, A.). German Conference on Bioinformatics 2010, Braunschweig, Germany, September 20, 2010 - September 22, 2010. (2010)
Thesis - PhD (10)
2020
Thesis - PhD
Stöchiometrische Modellierung von mikrobiellen Gemeinschaften in Biogasanlagen. Dissertation, Otto-von-Guericke-Universität, Magdeburg (2020)
2018
Thesis - PhD
Modellbasiertes Metabolic Engineering zur Optimierung der Itaconatproduktion in Escherichia coli. Dissertation, 144 pp., Shaker Verlag, Aachen (2018)
Thesis - PhD
Qualitative and Semi-Quantitative Analysis of Signal Transduction Networks. Dissertation, 288 pp., Shaker Verlag, Aachen (2018)
2016
Thesis - PhD
Modellbasierte Bestimmung von Interventionsstrategien zur Optimierung der Produktion von Biokraftstoffen in Cyanobakterien. Dissertation, Otto-von-Guericke-Universität, Magdeburg (2016)
2014
Thesis - PhD
Modellbasierte Identifizierung von Interventionsstrategien für Stoffwechselnetzwerke. Dissertation, Shaker, Aachen (2014)
2013
Thesis - PhD
Zellheterogenität am Beispiel der Expression des Escherichia coli lac Operona. Dissertation, Otto-von-Guericke-Universität, Magdeburg (2013)
2012
Thesis - PhD
Untersuchungen zur Redoxregulation der Photosynthesemembranexpression in dem fakultativ phototrophen Bakterium Rhodospirillum rubrum. Dissertation, Otto-von-Guericke-Universität, Magdeburg, Germany (2012)
Thesis - PhD
Das Stickstoff-PTS und seine regulatorische Funktion im Metabolismus von Escherichia coli LJ110. Dissertation, Universität, Osnabrück (2012)
Thesis - PhD
Interactive Visualization of Complex Structures in Modular Models for Systems Biology. Dissertation, Shaker, Aachen (2012)
Thesis - PhD
Modeling the AppA / PpsR Signal Transduction System of Rhodobacter sphaeroides. Dissertation, Otto-von-Guericke-Universität, Magdeburg (2012)
Thesis - Habilitation (1)
2011
Thesis - Habilitation
Räumliche Aspekte intrazellulärer Signalübertragung und Musterbildung in der Glykolyse. Habilitation, Otto von Guericke Universität, Magdeburg (2011)
Issue (1)
2011
Issue
105, (2 ) (2 ) (2011)
Proceedings of the workshop "Integration of OMICs datasets into metabolic pathway analysis" Edingburgh, U.K., 15 October 2010 IOMPA 2010 (Special issue). Biosystems Editorial (1)
2011
Editorial
105 (2), pp. 107 - 108 (2011)
Special Issue: Integration of OMICs datasets into Metabolic Pathway Analysis. Biosystems