Publications ARB group

Book Chapter (4)

1. 2013
   MPG.PuRe DOI
   Heise, S.; Flassig, R.; Klamt, S.: Benchmarking a Simple Yet Effective Approach for Inferring Gene Regulatory Networks from Systems Genetic Data. In: Gene Network Inference: Verification of Methods for Systems Genetic Data., pp. 33 - 47. Springer, Heidelberg (2013)
2. MPG.PuRe DOI
   Waddell, S. J.; Kamp von, A.; Klamt, S.; Neyrolles, O.: Host-pathogen interactions. In: Systems Biology of Tuberculosis, pp. 107 - 126. Springer, New York (2013)

Conference Paper (7)

1. 2016
   MPG.PuRe
   Carneiro, T.; Bettenbrock, K.; Lorenz, H.; Seidel-Morgenstern, A.: Combination of Preferential Crystallization and Racemization – First Results. In: BIWIC 2016, 23rd International Workshop on Industrial Crystallization, pp. 173 - 178. BIWIC 2016 - 23rd International Workshop on Industrial Crystallization, Magdeburg, Germany, September 06, 2016 - September 08, 2016. Cuvillier, Göttingen (2016)
2. 2015
   MPG.PuRe DOI PDF
   Kramer, B.; Tüngler, R.; Bettenbrock, K.; Conradi, C.: A compact mathematical model of mandelate racemase production and chaperone overexpression in E. coli. 8th Vienna Interantional Conference on Mathematical Modelling , Vienna, Austria, February 18, 2015 - February 20, 2015. IFAC-PapersOnLine 48 (1), pp. 23 - 28 (2015)
3. 2014
   MPG.PuRe
   Kramer, B.; Conradi, C.: Identifying network structures that can cause multistationarity. In: Proceedings of 21st International Symposium on Mathematical Theory of Networks and Systems, pp. 1548 - 1555. 21st International Symposium on Mathematical Theory of Networks and Systems, Groningen, Netherlands, July 07, 2014 - July 11, 2014. (2014)
4. 2013
   MPG.PuRe
   Kramer, B.; Conradi, C.: On Bistability Causing Structures in Escherichia Coli’s Metabolism. In: Computational Methods in Systems Biology: 11th International Conference, CMSB 2013, pp. 276 - 277. 11th International Conference, CMSB 2013, Klosterneuburg, Österreich, September 22, 2014 - September 24, 2014. (2013)
5. MPG.PuRe
   Ryll, A.; Bucher, J.; Niklas , J.; Klamt, S.: A fusion approach linking signaling logic and metabolic mass-flow kinetics in hepatocytes. In: Computational Methods in Systems Biology: 11th International Conference, CMSB 2013, pp. 255 - 256. 11th International Conference on Computational Methods in Systems Biology CMSB 13, Klosterneuburg, Austria, September 22, 2013 - September 24, 2013. (2013)
6. 2012
   MPG.PuRe DOI PDF
   Franz, A.; Grammel, H.; Rehner, R.; Paetzold, P.; Kienle, A.: Multiscale Modeling of Biopolymer Production in Multicellular Systems. MATHMOD 2012 - 7th Vienna International Conference on Mathematical Modelling, Vienna, Austria, February 15, 2012 - February 17, 2012. IFAC Proceedings Volumes 45 (2), pp. 326 - 330 (2012)
7. 2010
   MPG.PuRe
   Bohl, K.; Figueiredo, L.F.; Hädicke, O.; Klamt, S.; Kost, C.; Schuster, S.; Kaleta, C.: CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networks. In: German Conference on Bioinformatics 2010, pp. 71 - 80 (Eds. Schomburg, D.; Grote, A.). German Conference on Bioinformatics 2010, Braunschweig, Germany, September 20, 2010 - September 22, 2010. (2010)

Meeting Abstract (1)

1. 2015
   MPG.PuRe
   Wrzosek, K.; Bettenbrock, K.; Seidel-Morgenstern, A.: YIELD ENHANCEMENT OF THE PRODUCTION OF MANDELIC ACID ENANTIOMERS BY COUPLING OF ENANTIOSELECTIVE CHROMATOGRAPHY WITH ENZYMATIC RACEMIZATION. In: ECCE10+ECAB3+EPIC5 Chemical Engineering and Biochemical Engineering for a new sustainable process industry in Europe, p. 132 - 132. ECAB3 - 3rd European Congress of Applied Biotechnology, Nice, France, September 27, 2015 - October 01, 2015. (2015)

Thesis - Dissertation (7)

1. 2016
   MPG.PuRe PDF
   Erdrich, P.: Modellbasierte Bestimmung von Interventionsstrategien zur Optimierung der Produktion von Biokraftstoffen in Cyanobakterien. Dissertation, 178 pp., Otto-von-Guericke-Universität, Magdeburg (2016)
2. 2014
   MPG.PuRe PDF
   Hädicke, O.: Modellbasierte Identifizierung von Interventionsstrategien für Stoffwechselnetzwerke. Dissertation, 182 pp., Shaker Verlag GmbH, Aachen (2014)
3. 2013
   MPG.PuRe
   Marbach, A.: Zellheterogenität am Beispiel der Expression des Escherichia coli lac Operona. Dissertation, 128 pp., Otto-von-Guericke-Universität, Magdeburg (2013)
4. 2012
   MPG.PuRe PDF
   Pandey, R.: Modeling the AppA / PpsR Signal Transduction System of Rhodobacter sphaeroides. Dissertation, 103 pp., Otto-von-Guericke-Universität, Magdeburg (2012)
5. MPG.PuRe PDF
   Carius, A. B.: Untersuchungen zur Redoxregulation der Photosynthesemembranexpression in dem fakultativ phototrophen Bakterium Rhodospirillum rubrum. Dissertation, 134 pp., Otto-von-Guericke-Universität, Magdeburg, Germany (2012)
6. MPG.PuRe
   Jahn, S.: Das Stickstoff-PTS und seine regulatorische Funktion im Metabolismus von Escherichia coli LJ110. Dissertation, 142 pp., Universität, Osnabrück (2012)
7. MPG.PuRe PDF
   Mirschel, S.: Interactive Visualization of Complex Structures in Modular Models for Systems Biology. Dissertation, 191 pp., Shaker, Aachen (2012)

Thesis - Habilitation (1)

1. 2011
   MPG.PuRe
   Straube, R.: Räumliche Aspekte intrazellulärer Signalübertragung und Musterbildung in der Glykolyse. Habilitation, 200 pp., Otto von Guericke Universität, Magdeburg (2011)

Issue (1)

1. MPG.PuRe
   Schuster, S.; Kaleta, C.; Klamt, S.; Figueiredo de, L.F. (Eds.): Proceedings of the workshop "Integration of OMICs datasets into metabolic pathway analysis" Edingburgh, U.K., 15 October 2010 IOMPA 2010 (Special issue). Biosystems 105 (2 ) (2011)

Editorial (1)

1. MPG.PuRe DOI
   Kaleta, C.; de Figueiredo, L. F.; Heiland, I.; Klamt, S.; Schuster, S.: Special Issue: Integration of OMICs datasets into Metabolic Pathway Analysis. Biosystems 105 (2), pp. 107 - 108 (2011)