Publications of Molecular Network Analysis (MNA)
Journal Article (10)
2011
Journal Article
10 (2), pp. 639 - 654 (2011)
Petri nets as a framework for the reconstruction and analysis of signal transduction pathways and regulatory networks. Natural Computing 2010
Journal Article
6, 98 (2010)
Quantitative automated microscopy (QuAM) elucidates growth factor specific signalling in pain sensitization. Molecular Pain
Journal Article
11, 115 (2010)
Transcriptomic changes arising during light-induced sporulation in Physarum polycephalum. BMC Genomics
Journal Article
26 (7), pp. 974 - 975 (2010)
Snoopy - a unifying Petri net framework to investigate biomolecular networks. Bioinformatics
Journal Article
4, 27 (2010)
A predictive computational model of the kinetic mechanism of stimulus-induced transducer methylation and feedback regulation through CheY in archaeal phototaxis and chemotaxis. BMC Systems Biology 2009
Journal Article
9, 56 (2009)
Identification of Archaea-specific chemotaxis proteins which interact with the flagellar apparatus. BMC Microbiology
Journal Article
80, 023709 (2009)
Quantitative analysis of signal transduction in motile and phototactic cells by computerized light stimulation and model based tracking. Review of Scientific Instruments
Journal Article
2, pp. 140 - 144 (2009)
Aquatic protostelids - a study from northeastern Germany. Fungal Ecology 2008
Journal Article
9, 6 (2008)
A first glimpse at the transcriptome of Physarum polycephalum. BMC Genomics
Journal Article
384 (1), pp. 1 - 8 (2008)
Flagellar Rotation in the Archaeon Halobacterium salinarum Depends on ATP. Journal of Molecular Biology Conference Paper (2)
2011
Conference Paper
724, pp. 117 - 134 (Eds. Heiner, M.; Hiroshi, M.). International Workshop on Biological Processes & Petri Nets (BioPPN-2011), Newcastle upon Tyne, UK, June 20, 2011 - June 24, 2011. (2011)
Pain Signaling - A Case Study of the Modular Modeling Voncept with Prospect to a Protein-Oriented Modeling Platform. In: Proceedings of the International Workshop on Biological Processes & Petri Nets, Vol. 2010
Conference Paper
643, pp. 42 - 50 (Eds. Schwarick, M.; Heiner, M.). 17th German Workshop on Algorithms and Tools for Petri Nets (AWPN 2010), Cottbus, October 07, 2010 - October 08, 2010. (2010)
Modular and hierarchical modelling concept for large biological Petri nets applied to nociception. In: Proceedings of the 17th German Workshop on Algorithms and Tools for Petri Nets, Vol. Poster (1)
2008
Poster
Petri net modeling of cellular signal transduction based on a stochastic version of Snoopy. The 6th Conference on Computational Methods in Systems Biology, Rostock, Germany (2008)