Publications of Steffen Klamt
All genres
Journal Article (111)
21.
Journal Article
21, 19 (2020)
Automatic construction of metabolic models with enzyme constraints. BMC Bioinformatics 22.
Journal Article
9 (3), pp. 556 - 566 (2020)
MEMO: A Method for Computing Metabolic Modules for Cell-Free Production Systems. ACS Synthetic Biology 23.
Journal Article
Speeding up the core algorithm for the dual calculation of minimal cut sets in large metabolic networks. BMC Bioinformatics (21), 510 (2020)
24.
Journal Article
38, pp. 272 - 276 (2020)
MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology 25.
Journal Article
16 (7), e1008110 (2020)
An extended and generalized framework for the calculation of metabolic intervention strategies based on minimal cut sets. PLoS Computational Biology 26.
Journal Article
ATPase-based implementation of enforced ATP wasting in Saccharomyces cerevisiae for improved ethanol production. Biotechnology for Biofuels (13), 185 (2020)
27.
Journal Article
14 (9), 1800438 (2019)
Broadening the Scope of Enforced ATP Wasting as a Tool for Metabolic Engineering in Escherichia coli. Biotechnology Journal 28.
Journal Article
25 (2), pp. 156 - 158 (2019)
Computergestütztes Design mikrobieller Zellfabriken. Biospektrum 29.
Journal Article
15 (2), e1006759 (2019)
RedCom: A strategy for reduced metabolic modeling of complex microbial communities and its application for analyzing experimental datasets from anaerobic digestion. PLoS Computational Biology 30.
Journal Article
35 (17), pp. 3063 - 3072 (2019)
Characterizing and Ranking Computed Metabolic Engineering Strategies. Bioinformatics 31.
Journal Article
16 (3), pp. 925 - 935 (2019)
Designing optimal experiments to discriminate interaction graph models. IEEE ACM Transactions on Computational Biology and Bioinformatics 32.
Journal Article
10, 1095 (2019)
Augmenting Biogas Process Modeling by Resolving Intracellular Metabolic Activity. Frontiers in Microbiology 33.
Journal Article
78 (3), pp. 1350 - 1377 (2018)
Generalizing diffuse interface methods on graphs: non-smooth potentials and hypergraphs. SIAM Journal on Applied Mathematics 34.
Journal Article
14 (9), e1006492 (2018)
OptMDFpathway: Identification of metabolic pathways with maximal thermodynamic driving force and its application for analyzing the endogenous CO2 fixation potential of Escherichia coli. PLoS Computational Biology 35.
Journal Article
115 (1), pp. 156 - 164 (2018)
Temperature-dependent dynamic control of the TCA cycle increases volumetric productivity of itaconic acid production by Escherichia coli. Biotechnology and Bioengineering 36.
Journal Article
13 (2), 1700539 (2018)
When do two-stage processes outperform one-stage processes? Biotechnology Journal 37.
Journal Article
47, pp. 153 - 169 (2018)
A mathematical framework for yield (versus rate) optimization in constraint-based modeling and applications in metabolic engineering. Metabolic Engineering 38.
Journal Article
283, pp. 120 - 129 (2018)
Establishment of a five-enzyme cell-free cascade for the synthesis of uridine diphosphate N-acetylglucosamine. Journal of Biotechnology 39.
Journal Article
9, 5332 (2018)
MoVE identifies metabolic valves to switch between phenotypic states. Nature Communications 40.
Journal Article
7, 39647 (2017)
EColiCore2: a reference model of the central metabolism of Escherichia coli and the relationships to its genome-scale parent model. Scientific Reports