Publications of Katja Bettenbrock

Book Chapter (4)

2020
Book Chapter
Kalnenieks, U. Z.; Pappas, K. M.; Bettenbrock, K.: Zymomonas mobilis metabolism: Novel tools and targets for its rational engineering. In: Advances in Microbial Physiology, Vol. 77, pp. 37 - 88 (Ed. Poole, R. K.). Academic Press (2020)
2014
Book Chapter
Bettenbrock, K.; Bai, H.; Ederer, M.; Green, J.; Hellingwerf, K.J.; Holcombe, M.; Kunz, S.; Rolfe, M.D.; Sanguinetti, G.; Sawodny, O. et al.; Sharma, P.; Steinsiek, S.; Poole, R.K.: Towards a Systems Level Understanding of the Oxygen Response of Escherichia coli. In: Advances in Microbial Physiology, Vol. 64, pp. 65 - 114 (Ed. Poole, R. K.). Elsevier/Academic Press, Amsterdam (2014)
2005
Book Chapter
Kremling, A.; Stelling, J.; Bettenbrock, K.; Kremling, S.; Gilles, E. D.: Metabolic networks: Biology meets engineering sciences. In: Systems Biology: Definitions and Perspectives, pp. 215 - 234 (Eds. Alberghina, L.; Westerhoff, H. V.). Springer, Berlin [u.a.] (2005)
2001
Book Chapter
Stelling, J.; Kremling, A.; Ginkel, M.; Bettenbrock, K.; Gilles, E. D.: Towards a Virtual Biological Laboratory. In: Foundations of systems biology, pp. 189 - 212 (Ed. Kitano, H.). MIT Press, Cambridge/Massachusetts (2001)

Conference Paper (9)

2023
Conference Paper
Espinel-Rios, S.; Bettenbrock, K.; Klamt, S.; Avalos, J. L.; Findeisen, R.: Machine learning-supported cybergenetic modeling, optimization and control for synthetic microbial communities. In: 33rd European Symposium on Computer Aided Chemical Engineering, pp. 2601 - 2606 (Eds. Kokossis, A.; Georgiadis, M. C.; Pistikopoulos, E.). 33rd European Symposium on Computer Aided Process Engineering, Athen, Greece, June 18, 2023 - June 21, 2023. Elsevier, Amsterdam, Netherlands (2023)
Conference Paper
Espinel-Rios, S.; Slaviero, G.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Monitoring intracellular metabolite concentrations by moving horizon estimation based on kinetic modeling. IFAC-PapersOnLine 56 (2), pp. 4608 - 4613 (2023)
2022
Conference Paper
Espinel-Rios, S.; Morabito , B.; Pohlodek, J.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Optimal control and dynamic modulation of the ATPase gene expression for enforced ATP wasting in batch fermentations. In: IFAC-PapersOnLine, Vol. 55, pp. 174 - 180. 13th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, DYCOPS 2022, Busan, Korea, June 14, 2022 - June 17, 2022. (2022)
Conference Paper
Espinel-Rios, S.; Morabito, B.; Bettenbrock, K.; Findeisen, R.: Soft sensor for monitoring dyamic changes in cell composition. 9th IFAC Conference on Foundations of Systems Biology in Engineering (FOSBE), Cambridge, MA, August 28, 2022 - August 31, 2022. IFAC-PapersOnLine 55 (23), pp. 98 - 103 (2022)
2016
Conference Paper
Carneiro, T.; Bettenbrock, K.; Lorenz, H.; Seidel-Morgenstern, A.: Combination of Preferential Crystallization and Racemization – First Results. In: BIWIC 2016, 23rd International Workshop on Industrial Crystallization, pp. 173 - 178. BIWIC 2016 - 23rd International Workshop on Industrial Crystallization, Magdeburg, Germany, September 06, 2016 - September 08, 2016. Cuvillier, Göttingen (2016)
2015
Conference Paper
Kramer, B.; Tüngler, R.; Bettenbrock, K.; Conradi, C.: A compact mathematical model of mandelate racemase production and chaperone overexpression in E. coli. 8th Vienna Interantional Conference on Mathematical Modelling , Vienna, Austria, February 18, 2015 - February 20, 2015. IFAC-PapersOnLine 48 (1), pp. 23 - 28 (2015)
2003
Conference Paper
Kremling, A.; Bettenbrock, K.; Fischer, S.; Ginkel, M.; Sauter, T.; Gilles, E. D.: Towards whole cell in silico models for cellular systems: model set-up and model validation. In: Positive systems: proceedings of the First Multidisciplinary International Symposium on Positive Systems (POST 2003), pp. 92 - 102 (Eds. Benvenuti, L.; de Santis, A.; Farina, L.). First Multidisciplinary International Symposium on Positive Systems (POST 2003), Rome, Italy, August 28, 2003 - August 30, 2003. (2003)
2002
Conference Paper
Sauter, T.; Kremling, A.; Bettenbrock, K.; Fischer, S.; Gilles, E. D.: Analysis of the dynamics of the Escherichia coli glucose PTS in different time windows. In: Abstracting and synthesizing the principles of living systems: Fifth German Workshop on Artificial Life, pp. 33 - 42 (Eds. Polani, D.; Kim, J.; Martinetz, T.). Fifth German Workshop on Artificial Life, Luebeck, Germany, March 18, 2002 - March 20, 2002. (2002)
2000
Conference Paper
Kremling, A.; Bettenbrock, K.; Gilles, E. D.: Control of Glucose and Lactose Uptake in E. coli. In: Proceedings of the 4th International Congress on Biochemical Engineering, pp. 304 - 308. International Congress on Biochemical Engineering, Stuttgart, Germany, February 17, 2000 - February 18, 2000. Fraunhofer IRB Verlag, Stuttgart (2000)

Meeting Abstract (1)

2015
Meeting Abstract
Wrzosek, K.; Bettenbrock, K.; Seidel-Morgenstern, A.: YIELD ENHANCEMENT OF THE PRODUCTION OF MANDELIC ACID ENANTIOMERS BY COUPLING OF ENANTIOSELECTIVE CHROMATOGRAPHY WITH ENZYMATIC RACEMIZATION. In ECCE10+ECAB3+EPIC5 Chemical Engineering and Biochemical Engineering for a new sustainable process industry in Europe, p. 132 - 132. ECAB3 - 3rd European Congress of Applied Biotechnology, Nice, France, September 27, 2015 - October 01, 2015. (2015)

Talk (10)

2023
Talk
Espinel-Rios, S.; Bettenbrock, K.; Klamt, S.; Avalos, J.; Findeisen, R.: Machine learning-supported cybergenetic modeling, optimization and control for synthetic microbial communities. 33rd European Symposium on Computer-Aided Process Engineering (ESCAPE-33), Athens, Greece (2023)
Talk
Espinel-Rios, S.; Slaviero, G.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Monitoring intracellular metabolite concentrations by moving horizon estimation based on kinetic modeling. IFAC World Congress 2023, Yokohama, Japan (2023)
2022
Talk
Espinel-Rios, S.; Morabito , B.; Pohlodek, J.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Optimal control and dynamic modulation of the ATPase gene expression for enforced ATP wasting in batch fermentations. 13th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, DYCOPS 2022, Busan, Korea (2022)
2017
Talk
Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid production. Himmelfahrtstagung "Models for Developing and Optimising Biotech Production", Neu-Ulm, Germany (2017)
Talk
Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid production. Systems Biology meets Synthetic Biology, Frankfurt am Main, Germany (2017)
2016
Talk
Harder, B.-J.; Bettenbrock, K.; Klamt, S.: Model-based Metabolic Engineering of Escherichia coli for high yield itaconic acid production. Annual Conference 2016 of the Association for General and Applied Microbiology (VAAM), Jena, Germany (2016)
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