Publications of Steffen Klamt
All genres
Journal Article (111)
61.
Journal Article
10 (1), e1003378 (2014)
Enumeration of Smallest Intervention Strategies in Genome-Scale Metabolic Networks. PLoS Computational Biology 62.
Journal Article
14, p. 72 (2014)
The avian cell line AGE1.CR.pIX characterized by metabolic flux analysis. BMC Biotechnology 63.
Journal Article
124, pp. 26 - 38 (2014)
A model integration approach linking signalling and gene-regulatory logic with kinetic metabolic models. Biosystems 64.
Journal Article
7, p. 135 (2013)
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formlisms and tools. BMC Systems Biology 65.
Journal Article
29 (2), pp. 246 - 254 (2013)
An effective framework for reconstructing gene regulatory networks from genetical genomics data. Bioinformatics 66.
Journal Article
9 (7), pp. 1576 - 1583 (2013)
Bridging the layers: towards integration of signal transduction, regulation and metabolism into mathematical models. Molecular BioSystems 67.
Journal Article
12, 84 (2013)
In silico profiling of Escherichia coli and Saccharomyces cerevisiae as terpenoid factories. Microbial Cell Factories 68.
Journal Article
110 (10), pp. 2633 - 2642 (2013)
Evaluating differences of metabolic performances: Statistical methods and their application to animal cell cultivations. Biotechnology and Bioengineering 69.
Journal Article
14 (1), p. 318 (2013)
Comparison and improvement of algorithms for computing minimal cut sets. BMC Bioinformatics 70.
Journal Article
9 (9), p. e1003204 (2013)
Detecting and Removing Inconsistencies between Experimental Data and Signaling Network Topologies Using Integer Linear Programming on Interaction Graphs. PLoS Computational Biology 71.
Journal Article
7, p. 73 (2013)
Reconstruction of large-scale regulatory networks based on perturbation graphs and transitive reduction: improved methods and their evaluation. BMC Systems Biology 72.
Journal Article
11 (1), p. 43 (2013)
Modeling approaches for qualitative and semi-quantitative analysis of cellular signaling networks. Cell Communication and Signaling 73.
Journal Article
28 (3), pp. 381 - 387 (2012)
Minimal cut sets in metabolic networks are elementary modes in a dual network. Bioinformatics 74.
Journal Article
279 (18), pp. 3290 - 3313 (2012)
An integrative model links multiple inputs and signaling pathways to the onset of DNA synthesis in hepatocytes. FEBS Journal 75.
Journal Article
5, p. 150 (2011)
Metabolic network modeling of redox balancing and biohydrogen production in purple nonsulfur bacteria. BMC Systems Biology 76.
Journal Article
13 (2), pp. 204 - 213 (2011)
Computing complex metabolic intervention strategies using constrained minimal cut sets. Metabolic Engineering 77.
Journal Article
105 (2), pp. 162 - 168 (2011)
An application programming interface for CellNetAnalyzer. Biosystems 78.
Journal Article
7 (12), pp. 3253 - 3270 (2011)
Large-scale models of IL-1 and IL-6 signaling and their hepatocellular specification. Molecular BioSystems 79.
Journal Article
7 (1), p. 151 (2010)
From Binary to Multivalued to Continuous Models: The Iac Operon as a Case Study. Journal of Integrative Bioinformatics 80.
Journal Article
147 (2), pp. 88 - 101 (2010)
CASOP: a computational approach for strain optimization aiming at high productivity. Journal of Biotechnology