Publications of S. Klamt
All genres
Journal Article (111)
81.
Journal Article
26 (17), pp. 2160 - 2168 (2010)
TRANSWESD: inferring cellular networks with transitive reduction. Bioinformatics 82.
Journal Article
17 (1), pp. 39 - 53 (2010)
Computing Combinatorial Intervention Strategies and Failure Modes in Signaling Networks. Journal of Computational Biology 83.
Journal Article
5 (5), p. e1000385 (2009)
Hypergraphs and cellular networks. PLoS Computational Biology 84.
Journal Article
10, p. 181 (2009)
Computing Paths and Cycles in Biological Interaction Graphs. BMC Bioinformatics 85.
Journal Article
2, pp. 125 - 138 (2009)
Logical network of genotoxic stress-induced NF-kB signal transduction predicts putative target structures for therapeutic intervention strategies. Advances and Applications in Bioinformatics and Chemistry 86.
Journal Article
5, p. 331 (2009)
Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction. Molecular Systems Biology 87.
Journal Article
5 (8), e1000438 (2009)
The logic of EGFR/ErbB signaling: theoretical properties and analysis of high-throughput data. PLoS Computational Biology 88.
Journal Article
3, 98 (2009)
Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling. BMC Systems Biology 89.
Journal Article
2, 4 (2008)
Host-pathogen systems biology: Logical modelling of hepatocyte growth factor and Helicobacter pylori induced c-Met signal transduction. BMC Systems Biology 90.
Journal Article
15 (3), pp. 259 - 268 (2008)
Computing knock-out strategies in metabolic networks. Journal of Computational Biology 91.
Journal Article
4, 156 (2008)
Modeling the electron transport chain of purple non-sulfur bacteria. Molecular Systems Biology 92.
Journal Article
2 (2), pp. 80 - 93 (2008)
Multistability of signal transduction motifs. IET Systems Biology 93.
Journal Article
8, R89 (2007)
GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism. Genome Biology 94.
Journal Article
1, 2 (2007)
Structural and functional analysis of cellular networks with CellNetAnalyzer. BMC Systems Biology 95.
Journal Article
3, e163 (2007)
A logical model provides insights into T cell receptor signaling. PLoS Computational Biology 96.
Journal Article
83 (2-3 ), pp. 233 - 247 (2006)
Generalized concept of minimal cut sets in biochmical networks. Biosystems 97.
Journal Article
7, p. 56 (2006)
A methodology for the structural and functional analysis of signaling and regulatory networks. BMC Bioinformatics 98.
Journal Article
7, 506 (2006)
Visual set-up of logical models of signaling and regulatory networks with ProMoT. BMC Bioinformatics 99.
Journal Article
152 (4), pp. 249 - 255 (2005)
Algorithmic approaches for computing elementary modes in large biochemical reaction networks. IEE Proceedings - Systems Biology 100.
Journal Article
5, 175 (2004)
Computation of elementary modes: a unifying framework and the new binary approach. BMC Bioinformatics