Publications of Dirk Benndorf

Poster (23)

2016
Poster
Benndorf, D.; Becher, B.; Kohrs, F.; Heyer, R.; Rapp, E.; Schlüter, A.; Sczyrba, A.; Reichl, U.: An optimized bioinformatic workflow for metaproteomics of biogas plants. Annual Conference of the Association for General and Applied Microbiology (VAAM), Jena, Germany (2016)
Poster
Benndorf, D.; Heyer, R.; Kohrs, F.; Schallert, K.; Muth, T.; Reichl, U.: The MetaProteomeAnalyzer software provides a complete workflow for analysis of metaproteomic data in microbiome research. International de.NBI-Symposium "Bioinformatics for Human Health & Disease", Heidelberg, Germany (2016)
Poster
Heyer, R.; Kohrs, F.; Benndorf, D.; De Vrieze , J.; Rapp, E.; Schlüter, A.; Sczyrba, A.; Boon, N.: A metaproteomic approach for analysis of microbial community structure and function for improvement of biogas plant performance. Symposium on Advances and Applications in Metaproteomics, Magdeburg, Germany (2016)
Poster
Koch, S.; Benndorf, D.; Reichl, U.; Klamt, S.: New Methods for Modeling of Microbial Communities with Stoichiometric Metabolic Models. 6th International Conference on Foundations of Systems Biology in Engineering, Magdeburg, Germany (2016)
2015
Poster
Heyer, R.; Kohrs, F.; Benndorf, D.; De Vrieze, J.; Rapp, E.; Boon, N.; Reichl, U.: A metaproteomic approach for analysis of microbial community structure and function for improvement of biogas plant performance. 6th Congress of European Microbiologists (FEMS 2015), Maastricht, Netherlands (2015)
Poster
Koch, S.; Benndorf, D.; Reichl, U.; Klamt, S.: Prediction of Community Compositions in Stoichiometric Community Models. 4th Conference on Constraint-Based Reconstruction and Analysis, Heidelberg, Germany (2015)
Poster
Muth, T.; Behne, A.; Heyer, R.; Kohrs, F.; Hoffmann, M.; Benndorf, D.; Lehtevä, M.; Reichl, U.; Martens, L.; Rapp, E.: Metaproteomeanalyzer: a software tool for functional and taxonomic characterization of metaproteome data. Konferenz Proteomic Forum, Berlin (2015)
Poster
Püttker, S.; Kohrs, F.; Benndorf, D.; Heyer, R.; Rapp, E.; Reichl, U.: Analyses of activated sludge metaproteomes of a wastewater treatment plant a metaproteomic data set. 6th Congress of European Microbiologists - FEMS Microbiology Congress 2015, Maastricht, Belgien (2015)
2014
Poster
Bensmann, A.; Hanke-Rauschenbach, R.; Heyer, R.; Kohrs, F.; Benndorf, D.; Reichl, U.; Sundmacher, K.: Methanisierung von erneuerbarem Wasserstoff in Biogas-Anlagen,. ProcessNet-Anual Meeting, Aachen, Germany (2014)
Poster
Kohrs, F.; Benndorf, D.; Heyer, R.; Rapp, E.; Reichl, U.: Metaproteomics for Process Monitoring of Biogas Plants. ProcessNet-Jahrestagung und 31. DECHEMA-Jahrestagung der Biotechnologen 2014, Aachen, Germany (2014)
Poster
Kohrs, F.; Benndorf, D.; Klocke, M.; Rapp, E.; Reichl, U.: Metaproteomics for Process Monitoring of Biogas Plants. DECHEMA Himmelfahrtstagung 2014 (Biomaterials-Made in Bioreactors), Radebeul, Germany (2014)
2013
Poster
Heyer, R.; Muth, T.; Behne, A.; Kohrs, F.; Benndorf, D.; Kausmann, R.; Heiermann, M.; Klocke, M.; Rapp, E.; Reichl, U.: METAPROTEOMEANALYZER: A SOFTWARE TOOL FOR FUNCTIONAL AND TAXONOMIC CHARACTERIZATION OF METAPROTEOME DATA. Annual Conference of the Association for General and Applied Microbiology (VAAM), Bremen, Germany (2013)
Poster
Heyer, R.; Muth, T.; Kohrs, F.; Behne, A.; Benndorf, D.; Martens , L.; Klocke, M.; Rapp, E.; Reichl, U.: Biogas plant metaproteome analysis and biomarker search by using the software MetaProteomeAnalyser. 5th Congress of European Microbiologists (FEMS 2013), Leipzig, Germany (2013)
Poster
Kluge, S.; Rapp, E.; Benndorf, D.; Genzel, Y.; Scharfenberg, K.; Reichl, U.: Proteomic monitoring along the adaptation of MDCK cells from adherent to suspension growth with respect to influenza virus vaccine production. 23rd ESACT Meeting , Lille, France (2013)
Poster
Kluge, S.; Rourou, S.; Vester, D.; Majoul, S.; Benndorf, D.; Genzel, Y.; Rapp, E.; Kallel, H.; Reichl, U.: Exploring virus-host cell interaction on the proteome level: Rabies virus replication in Vero cells. Proteomic Forum 2013, Berlin, Germany (2013)
Poster
Kohrs, F.; Magnussen, A.; Benndorf, D.; Heyer, R.; Klocke, M.; Rapp, E.; Reichl, U.: Evaluation of multidimensional separation techniques to increase identification of proteins from anaerobic digesters. Annual Conference of the Association for General and Applied Microbiology (VAAM), Bremen (Germany) (2013)
2012
Poster
Muth, T.; Heyer, R.; Behne, A.; Kohrs, F.; Benndorf, D.; Rapp, E.; Reichl, U.: Meta-Proteome-Analyzer: A software tool specifically developed for the functional and taxonomic characterization of metaproteome data. GCB2012: German conference on bioinformatics, Jena, Germany (2012)
2011
Poster
Kluge, S.; Hoffmann, M.; Rapp, E.; Benndorf, D.; Reichl, U.: Proteome analysis of a bacterial mixed culture. Proteomic Forum 2011, Berlin (2011)

Working Paper (1)

2021
Working Paper
Van Den Bossche, T.; Kunath, B. J.; Schallert, K.; Schäpe, S. S.; Abraham, P. E.; Armengaud, J.; Arntzen, M. Ø.; Bassignani, A.; Benndorf, D.; Fuchs, S. et al.; Giannone, R. J.; Griffin, T. J.; Hagen, L. H.; Halder, R.; Henry, C.; Hettich, R. L.; Heyer, R.; Jagtap, P.; Jehmlich, N.; Jensen, M.; Juste, C.; Kleiner, M.; Langella, O.; Lehmann, T.; Leith, E.; May, P.; Mesuere, B.; Miotello, G.; Peters, S. L.; Pible, O.; Reichl, U.; Renard, B. Y.; Schiebenhoefer, H.; Scryba, A.; Tanca, A.; Trappe, K.; Trezzi, J.-P.; Uzzau, S.; Verschaffelt, P.; von Bergen, M.; Wilmes, P.; Wolf, M.; Martens, L.; Muth, T.: Critical Assessment of Metaproteome Investigation (CAMPI): A Multi-Lab Comparison of Established Workflows. bioRxiv (2021)
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