Publications of A. Kremling

Journal Article (30)

2004
Journal Article
Saez-Rodriguez, J.; Kremling, A.; Conzelmann, H.; Bettenbrock, K.; Gilles, E. D.: Modular Analysis of Signal Transduction Networks. IEEE Control Systems Magazine 24 (4), pp. 35 - 52 (2004)
Journal Article
Schmid, J. W.; Mauch, K.; Reuss, M.; Gilles, E. D.; Kremling, A.: Metabolic design based on a coupled gene expression-metabolic network model of tryptophan production in Escherichia coli. Metabolic Engineering 6 (4), pp. 364 - 377 (2004)
Journal Article
Sosa, N.; Kremling, A.; Ratsch, E.; Rojas, I.: Web-based visualisation of the transcriptional control network of Escherichia coli. In Silico Biology 4 (4), pp. 507 - 515 (2004)
2003
Journal Article
Ginkel, M.; Kremling, A.; Nutsch, T.; Rehner, R.; Gilles, E. D.: Modular modeling of cellular systems with ProMoT/Diva. Bioinformatics 19, pp. 1169 - 1176 (2003)
Journal Article
Hucka, M.; Finney, A.; Sauro, H. M.; Bolouri, H.; Doyle, J. C.; Kitano, H.; Arkin, A. P.; Bornstein, B. J.; Bray, D.; Cornish-Bowden, A. et al.; Cuellar, A. A.; Dronov, S.; Gilles, E. D.; Ginkel, M.; Gor, V.; Goryanin, I. I.; Hedley, W. J.; Hodgman, T. C.; Hofmeyr, J. H.; Hunter, P. J.; Juty, N. S.; Kasberger, J. L.; Kremling, A.; Kummer, U.; Le Novere, N.; Loew, L. M.; Lucio, D.; Mendes, P.; Minch, E.; Mjolsness, E. D.; Nakayama, Y.; Nelson, M. R.; Nielsen, P. F.; Sakurada, T.; Schaff, J. C.; Shapiro, B. E.; Shimizu, T. S.; Spence, H. D.; Stelling, J.; Takahashi, K.; Tomita, M.; Wagner, J.; Wang, J.: The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Bioinformatics 19 (4), pp. 524 - 531 (2003)
2001
Journal Article
Kremling, A.; Bettenbrock, K.; Laube, B.; Jahreis, K.; Lengeler, J. W.; Gilles, E. D.: The organization of metabolic reaction networks. III. Application for diauxic growth on glucose and lactose. Metabolic Engineering 3 (4), pp. 362 - 379 (2001)
Journal Article
Kremling, A.; Bettenbrock, K.; Stelling, J.; Reichl, U.; Gilles, E. D.: Systemorientierte Bioprozesstechnik: interdisziplinäre Forschung in Biologie, System- und Computerwissenschaften. Magdeburger Wissenschaftsjournal 6 (1/2), pp. 29 - 36 (2001)
Journal Article
Kremling, A.; Gilles, E. D.: The organization of metabolic reaction networks - II. Signal processing in hierarchical structured functional units. Metabolic Engineering 3 (2), pp. 138 - 150 (2001)
2000
Journal Article
Kremling, A.; Jahreis, K.; Lengeler, J. W.; Gilles, E. D.: The organization of metabolic reaction networks: A signal-oriented approach to cellular models. Metabolic Engineering 2 (3), pp. 190 - 200 (2000)
1998
Journal Article
Kendlbacher, T.; Kremling, A.; Gilles, E. D.: Modellgestützte Optimierung bei der Prozessführung bioverfahrenstechnischer Prozesse. at - Automatisierungstechnik 46 (8), pp. 375 - 380 (1998)

Book Chapter (2)

2005
Book Chapter
Kremling, A.; Stelling, J.; Bettenbrock, K.; Kremling, S.; Gilles, E. D.: Metabolic networks: Biology meets engineering sciences. In: Systems Biology: Definitions and Perspectives, pp. 215 - 234 (Eds. Alberghina, L.; Westerhoff, H. V.). Springer, Berlin [u.a.] (2005)
2001
Book Chapter
Stelling, J.; Kremling, A.; Ginkel, M.; Bettenbrock, K.; Gilles, E. D.: Towards a Virtual Biological Laboratory. In: Foundations of systems biology, pp. 189 - 212 (Ed. Kitano, H.). MIT Press, Cambridge/Massachusetts (2001)

Conference Paper (12)

2010
Conference Paper
Joy, J.; Kremling, A.: Study of the growth of Escherichia coli on mixed substrates using dynamic flux balance analysis. 11th IFAC Symposium on Computer Applications in Biotechnology, Leuven, Belgium, July 07, 2010 - July 09, 2010. IFAC Proceedings Volumes 43 (6), pp. 401 - 406 (2010)
2009
Conference Paper
Disli, I.; Kremling, A.; Kienle, A.: A Model Based Analysis of Multiple Steady States in Continuos Cell Culturer. In: Proceedings / MATHMOD 09: 6th Vienna Conference on Mathematical Modelling, pp. 796 - 804 (Eds. Troch, I.; Breitenecker, F.). Mathmod 2009 - 6th Vienna International Conference on Mathematical Modelling, Vienna, Austria, February 11, 2009 - February 13, 2009. (2009)
Conference Paper
Mirschel, S.; Steinmetz, K.; Kremling, A.: Two different approaches for modeling biochemical reaction networks with ProMoT. In: Proceedings / MATHMOD 09: 6th Vienna Conference on Mathematical Modelling, Vol. 35, pp. 2322 - 2330 (Eds. Troch, I.; Breitenecker, F.). Mathmod 2009 - 6th Vienna International Conference on Mathematical Modelling, Vienna, Austria, February 11, 2009 - February 13, 2009. (2009)
Conference Paper
Schenkendorf, R.; Kremling, A.; Mangold, M.: Optimal Experimental Design and Model Selection by a Sigma Point Approach. In: Proceedings / MATHMOD 09: 6th Vienna Conference on Mathematical Modelling, pp. 2389 - 2395 (Eds. Troch, I.; Breitenecker, F.). Mathmod 2009 - 6th Vienna International Conference on Mathematical Modelling, Vienna, Austria, February 11, 2009 - February 13, 2009. (2009)
2003
Conference Paper
Kremling, A.; Bettenbrock, K.; Fischer, S.; Ginkel, M.; Sauter, T.; Gilles, E. D.: Towards whole cell in silico models for cellular systems: model set-up and model validation. In: Positive systems: proceedings of the First Multidisciplinary International Symposium on Positive Systems (POST 2003), pp. 92 - 102 (Eds. Benvenuti, L.; de Santis, A.; Farina, L.). First Multidisciplinary International Symposium on Positive Systems (POST 2003), Rome, Italy, August 28, 2003 - August 30, 2003. (2003)
2002
Conference Paper
Sauter, T.; Kremling, A.; Bettenbrock, K.; Fischer, S.; Gilles, E. D.: Analysis of the dynamics of the Escherichia coli glucose PTS in different time windows. In: Abstracting and synthesizing the principles of living systems: Fifth German Workshop on Artificial Life, pp. 33 - 42 (Eds. Polani, D.; Kim, J.; Martinetz, T.). Fifth German Workshop on Artificial Life, Luebeck, Germany, March 18, 2002 - March 20, 2002. (2002)
2001
Conference Paper
Klamt, S.; Kremling, A.; Gilles, E. D.: FluxAnalyzer: a graphical user interface for stoichiometric and quantitative analysis of metabolic networks. 8th IFAC Internationall Conference on Computer Applications in Biotechnology, Québec, June 24, 2001 - June 27, 2001. IFAC Proceedings Volumes, pp. 119 - 124 (2001)
Conference Paper
Kremling, A.; Ginkel, M.; Gilles, E. D.: Integrating Workbench for Modeling and Numerical Analysis of Cellular Systems. 8th International Conference on Computer Applications in Biotechnology, Quebec, Canada, June 24, 2001 - June 27, 2001. IFAC Proceedings Volumes 34 (5), pp. 85 - 90 (2001)
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