Publikationen von Sebastian Espinel-Rios

Espinel-Rios, S.; Behrendt, G.; Bauer, J.; Morabito, B.; Pohlodek, J.; Schütze, A.; Findeisen, R.; Bettenbrock, K.; Klamt, S.: Experimentally implemented dynamic optogenetic optimization of ATPase expression using knowledge-based and Gaussian-process-supported models. Process Biochemistry (143), S. 174 - 185 (2024)

Espinel-Rios, S.; Morabito, B.; Pohlodek, J.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Toward a modeling, optimization, and predictive control framework for fed-batch metabolic cybergenetics. Biotechnology and Bioengineering 121 (1), S. 366 - 379 (2024)

Boecker, S.; Espinel-Rios, S.; Bettenbrock, K.; Klamt, S.: Enabling anaerobic growth of Escherichia coli on glycerol in defined minimal medium using acetate as redox sink. Metabolic Engineering 73, S. 50 - 57 (2022)

Espinel-Rios, S.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Maximizing batch fermentation efficiency by constrained model-based optimization and predictive control of adenosine triphosphate turnover. AIChE-Journal 68 (4), e17555 (2022)

Espinel-Rios, S.; Bettenbrock, K.; Klamt, S.; Avalos, J. L.; Findeisen, R.: Machine learning-supported cybergenetic modeling, optimization and control for synthetic microbial communities. In: 33rd European Symposium on Computer Aided Chemical Engineering, S. 2601 - 2606 (Hg. Kokossis, A.; Georgiadis, M. C.; Pistikopoulos, E.). 33rd European Symposium on Computer Aided Process Engineering, Athen, Greece, 18. Juni 2023 - 21. Juni 2023. Elsevier, Amsterdam, Netherlands (2023)

Espinel-Rios, S.; Kok, R.; Klamt, S.; Avalos, J. L.; Findeisen, R.: Batch-to-Batch Optimization with Model Adaptation Leveraging Gaussian Processes: The Case of Optogenetically Assisted Microbial Consortia. In: International Conference on Control, Automation and Systems, S. 1292 - 1297. 23rd International Conference on Control, Automation and Systems, ICCAS 2023, Yeosu, Korea, 17. Oktober 2023 - 20. Oktober 2023. IEEE, Boca Raton (2023)

Espinel-Rios, S.; Slaviero, G.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Monitoring intracellular metabolite concentrations by moving horizon estimation based on kinetic modeling. IFAC-PapersOnLine 56 (2), S. 4608 - 4613 (2023)

Espinel-Rios, S.; Huber, N.; Alcalá Orozco, E. A.; Morabito, B.; Rexer, T.; Reichl, U.; Klamt, S.; Findeisen, R.: Cell-free biosynthesis meets dynamic optimization and control: a fed-batch framework. 9th IFAC Conference on Foundations of Systems Biology in Engineering (FOSBE), Cambridge, MA, 28. August 2022 - 31. August 2022. IFAC-PapersOnLine 55 (23), S. 92 - 97 (2022)

Espinel-Rios, S.; Morabito , B.; Pohlodek, J.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Optimal control and dynamic modulation of the ATPase gene expression for enforced ATP wasting in batch fermentations. In: IFAC-PapersOnLine, Bd. 55, S. 174 - 180. 13th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, DYCOPS 2022, Busan, Korea, 14. Juni 2022 - 17. Juni 2022. (2022)

Espinel-Rios, S.; Morabito, B.; Bettenbrock, K.; Findeisen, R.: Soft sensor for monitoring dyamic changes in cell composition. 9th IFAC Conference on Foundations of Systems Biology in Engineering (FOSBE), Cambridge, MA, 28. August 2022 - 31. August 2022. IFAC-PapersOnLine 55 (23), S. 98 - 103 (2022)

Morabito, B.; Pohlodek, J.; Kranert, L.; Espinel-Rios, S.; Findeisen, R.: Efficient and Simple Gaussian Process Supported Stochastic Model Predictive Control for Bioreactors using HILO-MPC. In: IFAC-PapersOnLine, Bd. 55, S. 922 - 927. 13th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, DYCOPS 2022, Busan, Korea, 14. Juni 2022 - 17. Juni 2022. (2022)

Espinel-Rios, S.; Bettenbrock, K.; Klamt, S.; Avalos, J.; Findeisen, R.: Machine learning-supported cybergenetic modeling, optimization and control for synthetic microbial communities. 33rd European Symposium on Computer-Aided Process Engineering (ESCAPE-33), Athens, Greece (2023)

Espinel-Rios, S.; Slaviero, G.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Monitoring intracellular metabolite concentrations by moving horizon estimation based on kinetic modeling. IFAC World Congress 2023, Yokohama, Japan (2023)

Espinel-Rios, S.; Morabito , B.; Pohlodek, J.; Bettenbrock, K.; Klamt, S.; Findeisen, R.: Optimal control and dynamic modulation of the ATPase gene expression for enforced ATP wasting in batch fermentations. 13th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, DYCOPS 2022, Busan, Korea (2022)

Espinel-Rios, S.: Modeling, optimization, and predictive control for metabolic cybergenetics. Dissertation, Otto-von-Guericke-Universität, Magdeburg (2023)