Publikationen von Axel Kamp von
Alle Typen
Zeitschriftenartikel (19)
1.
Zeitschriftenartikel
12 (7), 585 (2022)
Analyzing and Resolving Infeasibility in Flux Balance Analysis of Metabolic Networks. Metabolites 2.
Zeitschriftenartikel
38 (5), S. 1467 - 1469 (2022)
CNApy: a CellNetAnalyzer GUI in Python for Analyzing and Designing Metabolic Networks. Bioinformatics 3.
Zeitschriftenartikel
9 (3), S. 556 - 566 (2020)
MEMO: A Method for Computing Metabolic Modules for Cell-Free Production Systems. ACS Synthetic Biology 4.
Zeitschriftenartikel
Speeding up the core algorithm for the dual calculation of minimal cut sets in large metabolic networks. BMC Bioinformatics (21), 510 (2020)
5.
Zeitschriftenartikel
16 (7), e1008110 (2020)
An extended and generalized framework for the calculation of metabolic intervention strategies based on minimal cut sets. PLoS Computational Biology 6.
Zeitschriftenartikel
25 (2), S. 156 - 158 (2019)
Computergestütztes Design mikrobieller Zellfabriken. Biospektrum 7.
Zeitschriftenartikel
14 (9), e1006492 (2018)
OptMDFpathway: Identification of metabolic pathways with maximal thermodynamic driving force and its application for analyzing the endogenous CO2 fixation potential of Escherichia coli. PLoS Computational Biology 8.
Zeitschriftenartikel
9, 5332 (2018)
MoVE identifies metabolic valves to switch between phenotypic states. Nature Communications 9.
Zeitschriftenartikel
8, 15926 (2017)
Growth-coupled overproduction is feasible for almost all metabolites in five major production organisms. Nature Communications 10.
Zeitschriftenartikel
261, S. 221 - 228 (2017)
Use of CellNetAnalyzer in biotechnology and metabolic engineering. Journal of Biotechnology 11.
Zeitschriftenartikel
2, 16032 (2016)
MUFINS: multi-formalism interaction network simulator. npj Systems Biology and Applications 12.
Zeitschriftenartikel
31 (17), S. 2844 - 2851 (2015)
Genome-scale strain designs based on regulatory minimal cut sets. Bioinformatics 13.
Zeitschriftenartikel
10 (1), e1003378 (2014)
Enumeration of Smallest Intervention Strategies in Genome-Scale Metabolic Networks. PLoS Computational Biology 14.
Zeitschriftenartikel
7, S. 135 (2013)
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formlisms and tools. BMC Systems Biology 15.
Zeitschriftenartikel
28 (3), S. 381 - 387 (2012)
Minimal cut sets in metabolic networks are elementary modes in a dual network. Bioinformatics 16.
Zeitschriftenartikel
105 (2), S. 162 - 168 (2011)
An application programming interface for CellNetAnalyzer. Biosystems 17.
Zeitschriftenartikel
17 (1), S. 39 - 53 (2010)
Computing Combinatorial Intervention Strategies and Failure Modes in Signaling Networks. Journal of Computational Biology 18.
Zeitschriftenartikel
10, S. 181 (2009)
Computing Paths and Cycles in Biological Interaction Graphs. BMC Bioinformatics 19.
Zeitschriftenartikel
152 (4), S. 249 - 255 (2005)
Algorithmic approaches for computing elementary modes in large biochemical reaction networks. IEE Proceedings - Systems Biology Buchkapitel (2)
20.
Buchkapitel
Stoichiometric and Constraint-Based Analysis of Biochemical Reaction Networks. In: Large-Scale Networks in Engineering and Life Sciences, S. 263 - 316. Springer International Publishing, Cham (2014)