Publikationen von Dirk Benndorf
Alle Typen
Zeitschriftenartikel (58)
2021
Zeitschriftenartikel
22 (20), 10992 (2021)
MPA_Pathway_Tool: User-Friendly, Automatic Assignment of Microbial Community Data on Metabolic Pathways. International Journal of Molecular Sciences 2020
Zeitschriftenartikel
314, 123679 (2020)
Impact of feeding and stirring regimes on the internal stratification of microbial communities in the fermenter of anaerobic digestion plants. Bioresource Technology
Zeitschriftenartikel
8 (12), 2024 (2020)
The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses. Microorganisms
Zeitschriftenartikel
15, S. 3212 - 3239 (2020)
A complete and flexible workflow for metaproteomics data analysis based on MetaProteomeAnalyzer and Prophane. Nature Protocols
Zeitschriftenartikel
11, 233 (2020)
The Impact of ackA, pta, and ackA-pta Mutations on Growth, Gene Expression and Protein Acetylation in Escherichia coli K-12. Frontiers in Microbiology
Zeitschriftenartikel
11, 530 (2020)
Substrate-Dependent Fermentation of Bamboo in Giant Panda Gut Microbiomes: Leaf Primarily to Ethanol and Pith to Lactate. Frontiers in Microbiology
Zeitschriftenartikel
19 (8), S. 3562 - 3566 (2020)
Connecting MetaProteomeAnalyzer and PeptideShaker to Unipept for Seamless End-to-End Metaproteomics Data Analysis. Journal of Proteome Research 2019
Zeitschriftenartikel
10, 1883 (2019)
A Robust and Universal Metaproteomics Workflow for Research Studies and Routine Diagnostics Within 24 h Using Phenol Extraction, FASP Digest, and the MetaProteomeAnalyzer. Frontiers in Microbiology
Zeitschriftenartikel
Metaproteome analysis reveals that syntrophy, competition, and phage-host interaction shape microbial communities in biogas plants. Microbiome (7), 69 (2019)
Zeitschriftenartikel
15 (2), e1006759 (2019)
RedCom: A strategy for reduced metabolic modeling of complex microbial communities and its application for analyzing experimental datasets from anaerobic digestion. PLoS Computational Biology
Zeitschriftenartikel
201, S. 93 - 103 (2019)
Metaproteomics of fecal samples of Crohn's disease and Ulcerative Colitis. Journal of Proteomics
Zeitschriftenartikel
13 (4), S. 1004 - 1018 (2019)
Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities. The ISME Journal
Zeitschriftenartikel
19 (2), S. 439 - 455 (2019)
A robust, cost-effective method for DNA, RNA and protein co-extraction from soil, other complex microbiomes, and pure cultures. Molecular Ecology Resources
Zeitschriftenartikel
10, 1095 (2019)
Augmenting Biogas Process Modeling by Resolving Intracellular Metabolic Activity. Frontiers in Microbiology 2018
Zeitschriftenartikel
90, S. 685 - 689 (2018)
MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the Go. Analytical Chemistry
Zeitschriftenartikel
197 (Part 1), S. 253 - 263 (2018)
Valorisation of deinking sludge as a substrate for lignocellulolytic enzymes production by Pleurotus ostreatus. Journal of Cleaner Production
Zeitschriftenartikel
18 (7), S. 498 - 509 (2018)
SDS-PAGE fractionation to increase metaproteomic insight into the taxonomic and functional composition of microbial communities for biogas plant samples. Engineering in Life Sciences 2017
Zeitschriftenartikel
261, S. 24 - 36 (2017)
Challenges and perspectives of metaproteomic data analysis. Journal of Biotechnology
Zeitschriftenartikel
46, S. 56 - 68 (2017)
Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community composition. Anaerobe
Zeitschriftenartikel
7, 15783 (2017)
FMNH2-dependent monooxygenases initiate catabolism of sulfonamides in Microbacterium sp. strain BR1 subsisting on sulfonamide antibiotics. Scientific Reports