Publications of S. Klamt
All genres
Journal Article (111)
2010
Journal Article
26 (17), pp. 2160 - 2168 (2010)
TRANSWESD: inferring cellular networks with transitive reduction. Bioinformatics
Journal Article
17 (1), pp. 39 - 53 (2010)
Computing Combinatorial Intervention Strategies and Failure Modes in Signaling Networks. Journal of Computational Biology 2009
Journal Article
5 (5), p. e1000385 (2009)
Hypergraphs and cellular networks. PLoS Computational Biology
Journal Article
10, p. 181 (2009)
Computing Paths and Cycles in Biological Interaction Graphs. BMC Bioinformatics
Journal Article
2, pp. 125 - 138 (2009)
Logical network of genotoxic stress-induced NF-kB signal transduction predicts putative target structures for therapeutic intervention strategies. Advances and Applications in Bioinformatics and Chemistry
Journal Article
5, p. 331 (2009)
Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction. Molecular Systems Biology
Journal Article
5 (8), e1000438 (2009)
The logic of EGFR/ErbB signaling: theoretical properties and analysis of high-throughput data. PLoS Computational Biology
Journal Article
3, 98 (2009)
Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling. BMC Systems Biology 2008
Journal Article
2, 4 (2008)
Host-pathogen systems biology: Logical modelling of hepatocyte growth factor and Helicobacter pylori induced c-Met signal transduction. BMC Systems Biology
Journal Article
15 (3), pp. 259 - 268 (2008)
Computing knock-out strategies in metabolic networks. Journal of Computational Biology
Journal Article
4, 156 (2008)
Modeling the electron transport chain of purple non-sulfur bacteria. Molecular Systems Biology
Journal Article
2 (2), pp. 80 - 93 (2008)
Multistability of signal transduction motifs. IET Systems Biology 2007
Journal Article
8, R89 (2007)
GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism. Genome Biology
Journal Article
1, 2 (2007)
Structural and functional analysis of cellular networks with CellNetAnalyzer. BMC Systems Biology
Journal Article
3, e163 (2007)
A logical model provides insights into T cell receptor signaling. PLoS Computational Biology 2006
Journal Article
83 (2-3 ), pp. 233 - 247 (2006)
Generalized concept of minimal cut sets in biochmical networks. Biosystems
Journal Article
7, p. 56 (2006)
A methodology for the structural and functional analysis of signaling and regulatory networks. BMC Bioinformatics
Journal Article
7, 506 (2006)
Visual set-up of logical models of signaling and regulatory networks with ProMoT. BMC Bioinformatics 2005
Journal Article
152 (4), pp. 249 - 255 (2005)
Algorithmic approaches for computing elementary modes in large biochemical reaction networks. IEE Proceedings - Systems Biology 2004
Journal Article
5, 175 (2004)
Computation of elementary modes: a unifying framework and the new binary approach. BMC Bioinformatics