Publikationen von Dirk Benndorf
Alle Typen
Zeitschriftenartikel (58)
21.
Zeitschriftenartikel
22 (20), 10992 (2021)
MPA_Pathway_Tool: User-Friendly, Automatic Assignment of Microbial Community Data on Metabolic Pathways. International Journal of Molecular Sciences 22.
Zeitschriftenartikel
314, 123679 (2020)
Impact of feeding and stirring regimes on the internal stratification of microbial communities in the fermenter of anaerobic digestion plants. Bioresource Technology 23.
Zeitschriftenartikel
8 (12), 2024 (2020)
The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses. Microorganisms 24.
Zeitschriftenartikel
15, S. 3212 - 3239 (2020)
A complete and flexible workflow for metaproteomics data analysis based on MetaProteomeAnalyzer and Prophane. Nature Protocols 25.
Zeitschriftenartikel
11, 233 (2020)
The Impact of ackA, pta, and ackA-pta Mutations on Growth, Gene Expression and Protein Acetylation in Escherichia coli K-12. Frontiers in Microbiology 26.
Zeitschriftenartikel
11, 530 (2020)
Substrate-Dependent Fermentation of Bamboo in Giant Panda Gut Microbiomes: Leaf Primarily to Ethanol and Pith to Lactate. Frontiers in Microbiology 27.
Zeitschriftenartikel
19 (8), S. 3562 - 3566 (2020)
Connecting MetaProteomeAnalyzer and PeptideShaker to Unipept for Seamless End-to-End Metaproteomics Data Analysis. Journal of Proteome Research 28.
Zeitschriftenartikel
10, 1883 (2019)
A Robust and Universal Metaproteomics Workflow for Research Studies and Routine Diagnostics Within 24 h Using Phenol Extraction, FASP Digest, and the MetaProteomeAnalyzer. Frontiers in Microbiology 29.
Zeitschriftenartikel
Metaproteome analysis reveals that syntrophy, competition, and phage-host interaction shape microbial communities in biogas plants. Microbiome (7), 69 (2019)
30.
Zeitschriftenartikel
15 (2), e1006759 (2019)
RedCom: A strategy for reduced metabolic modeling of complex microbial communities and its application for analyzing experimental datasets from anaerobic digestion. PLoS Computational Biology 31.
Zeitschriftenartikel
201, S. 93 - 103 (2019)
Metaproteomics of fecal samples of Crohn's disease and Ulcerative Colitis. Journal of Proteomics 32.
Zeitschriftenartikel
13 (4), S. 1004 - 1018 (2019)
Reduced TCA cycle rates at high hydrostatic pressure hinder hydrocarbon degradation and obligate oil degraders in natural, deep-sea microbial communities. The ISME Journal 33.
Zeitschriftenartikel
19 (2), S. 439 - 455 (2019)
A robust, cost-effective method for DNA, RNA and protein co-extraction from soil, other complex microbiomes, and pure cultures. Molecular Ecology Resources 34.
Zeitschriftenartikel
10, 1095 (2019)
Augmenting Biogas Process Modeling by Resolving Intracellular Metabolic Activity. Frontiers in Microbiology 35.
Zeitschriftenartikel
90, S. 685 - 689 (2018)
MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the Go. Analytical Chemistry 36.
Zeitschriftenartikel
197 (Part 1), S. 253 - 263 (2018)
Valorisation of deinking sludge as a substrate for lignocellulolytic enzymes production by Pleurotus ostreatus. Journal of Cleaner Production 37.
Zeitschriftenartikel
18 (7), S. 498 - 509 (2018)
SDS-PAGE fractionation to increase metaproteomic insight into the taxonomic and functional composition of microbial communities for biogas plant samples. Engineering in Life Sciences 38.
Zeitschriftenartikel
261, S. 24 - 36 (2017)
Challenges and perspectives of metaproteomic data analysis. Journal of Biotechnology 39.
Zeitschriftenartikel
46, S. 56 - 68 (2017)
Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community composition. Anaerobe 40.
Zeitschriftenartikel
7, 15783 (2017)
FMNH2-dependent monooxygenases initiate catabolism of sulfonamides in Microbacterium sp. strain BR1 subsisting on sulfonamide antibiotics. Scientific Reports