Publications of Dirk Benndorf

Journal Article (50)

Journal Article
Hanreich, A.; Schimpf, U.; Zakrzewski, M.; Schlüter, A.; Benndorf, D.; Heyer, R.; Rapp, E.; Puhler, A.; Reichl, U.; Klocke, M.: Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation. Systematic and Applied Microbiology 36 (5), pp. 330 - 338 (2013)
Journal Article
Heyer, R.; Kohrs, F.; Benndorf, D.; Rapp, E.; Kausmann, R.; Heiermann, M.; Klocke, M.; Reichl, U.: Metaproteome analysis of the microbial communities in agricultural biogas plants. New biotechnology 30 (6), pp. 614 - 622 (2013)
Journal Article
Kluge, S.; Rourou, S.; Vester, D.; Majoul, S.; Benndorf, D.; Genzel, Y.; Rapp, E.; Kallel, H.; Reichl, U.: Proteome analysis of virus-host cell interaction: rabies virus replication in Vero cells in two different media. Applied Microbiology and Biotechnology 97 (12), pp. 5493 - 5506 (2013)
Journal Article
Muth, T.; Benndorf, D.; Reichl, U.; Rapp, E.; Martens, L.: Searching for a needle in a stack of needles: challenges in metaproteomics data analysis. Molecular BioSystems 9 (4), pp. 578 - 585 (2013)
Journal Article
Hanreich, A.; Heyer, R.; Benndorf, D.; Rapp, E.; Pioch, M.; Reichl, U.; Klocke, M.: Metaproteome analysis to determine the metabolically active part of thermophilic microbial community producing biogas from agricultural biomass. Canadian Journal of Microbiology 58 (7), pp. 917 - 922 (2012)
Journal Article
Kluge, S.; Hoffmann, M.; Benndorf, D.; Rapp, E.; Reichl, U.: Proteomic tracking and analysis of a bacterial mixed culture. Proteomics 12 (12), pp. 1893 - 1901 (2012)
Journal Article
Kolvenbach, B. A.; Lenz, M.; Benndorf, D.; Rapp, E.; Fousek, J.; Vlcek, C.; Schäffer, A.; Gabriel, F. L.; Kohler, H.-P. E.; Corvini, P. F.: Purification and characterization of hydroquinone dioxygenase from Sphingomonas sp. strain TTNP3. AMB Express 1, p. 8 (2011)
Journal Article
Kuhn, R.; Benndorf, D.; Rapp, E.; Reichl, U.; Palese, L.; Pollice, A.: Metaproteome analysis of sewage sludge from membrane bioreactors. Proteomics 11 (13), pp. 2738 - 2744 (2011)
Journal Article
Benndorf, D.; Jach, M.; Klamt, S.; Reichl, U.: Systembiologie-Ausbildung von Anfang an. (2), pp. 82 - 84 (2010)
Journal Article
Roma-Rodriguesa, C.; Santosa, P.; Benndorf, D.; Rapp, E.; Sá-Correiaa, I.: Response of Pseudomonas putida KT2440 to phenol at the level of membrane proteome. Proteomics 73 (8), pp. 1461 - 1478 (2010)

Conference Paper (2)

Conference Paper
Zoun, R.; Schallert, K.; Broneske, D.; Trifonova, I.; Chen, X.; Heyer, R.; Benndorf, D.; Saake, G.: Efficient transformation of protein sequence databases to columnar index schema. In: Database and Expert Systems Applications. DEXA 2019, pp. 67 - 72 (Ed. Anderst-Kotsis , G.). DEXA: International Conference on Database and Expert Systems Applications , Linz, Austria, August 26, 2019 - August 29, 2019. Springer, Cham, Switzerland (2019)
Conference Paper
Zoun, R.; Campero Durand, G.; Schallert , K.; Patrikar, A.; Broneske, D.; Fenske, W.; Heyer, R.; Benndorf, D.; Saake, G.: Protein Identification as a Suitable Application for Fast Data Architecture. DEXA : International Conference on Database and Expert Systems Applications , Regensburg, Germany, September 03, 2018 - September 06, 2018. Database and Expert Systems Applications: DEXA 2018 International Workshops BDMICS, BIOKDD, and TIR 903, pp. 168 - 178 (2018)

Meeting Abstract (1)

Meeting Abstract
Kuhn, R.; Benndorf, D.; Rapp, E.; Reichl, U.; Pollice, A.; Palese, L.: Metaproteomanalyse von Klärschlamm aus Membranbioreaktoren. In Chemie Ingenieur Technik, 82 (9 - Special Issue: ProcessNet-Jahrestagung 2010 und 28. Jahrestagung der Biotechnologen), pp. 1539 - 1540 . Processet-Jahrestagung 2010 und 28. Jahrestagung der Biotechnologen, Aachen, Germany, September 21, 2010 - September 23, 2010. Verlag Chemie, GmbH, Weinheim, Germany (2010)

Talk (30)

Hellwig, P.; Benndorf, D.; Reichl, U.: Combined metagenomics and metaproteomics of a two-stage biogas plant questions the benefit of the hydrolysis fermenter for process performance. 4th International Metaproteomics Symposium, Luxembourg, 2021, Luxembourg, Luxembourg (2021)
Khesali Aghtaei, H.; Benndorf, D.; Reichl, U.: Adaptation of a microbial community to demand-oriented biological methanation. V. International Conference on Monitoring & Process Control of Anaerobic Digestion Processes, virtual (2021)
Benndorf, D.: Was kann die Proteomik zur Klärung des Biogas-Metabolismus leisten? Abschlusssymposium des FNR/BMEL-Verbundvorhabens Modisto „Dynamik des Intermediat-Stoffwechsels in Biogasprozessen“, Virtual Meeting (2020)
Benndorf, D.: Recent experimental and bioinformatic developments in metaproteomics. Metaproteomics - The Gateway to Microbial Commmunity Structure-Function Analysis, Sheffield, UK (2019)
Heyer, R.; Biermann, R.; Isermann, B.; Lehmann, T.; Buss, E.; Schallert, K.; Vilchez-Vargas, R.; Sydor, S.; Link, A.; Canbay, A. et al.; Reichl, U.; Benndorf, D.: System diagnostics of the human gut microbiome using metaproteome analysis of fecal samples. Deutscher Kongress für Laboratoriumsmedizin, Magdeburg, Germany (2019)
Heyer, R.; Schallert, K.; Püttker, S.; Kohrs, F.; Hellwig, P.; Theuerl, S.; Schlüter, A.; Reichl, U.; Benndorf, D.: Identification of process parameters shaping microbial communities in biogas plants using large scale metaproteome analysis. Annual Conference of the Association for General and Applied Microbiology (VAAM), Mainz, Germany (2019)
Khesali, H.; Amirhossein, A.; Benndorf, D.; Reichl, U.: Biological conversion of CO2 from a biogas plant to CH4. Young Professionals Conference on Process Engineering (YCOPE 2019), Magdeburg (2019)
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