Publications BPE group

Journal Article (18)

2014
Journal Article
Benndorf, D.; Reichl, U.: Proteomics in environmental and technical microbiology. Engineering in Life Sciences 14 (1), pp. 27 - 46 (2014)
Journal Article
Bensch, G.; Rüger, M.; Wassermann, M.; Weinholz, S.; Reichl, U.; Cordes, C.: Flow cytometric viability assessment of lactic acid bacteria starter cultures produced by fluidized bed drying. Applied Microbiology and Biotechnology 98 (11), pp. 4897 - 4909 (2014)
Journal Article
Bensmann, A.; Hanke-Rauschenbach, R.; Heyer, R.; Kohrs, F.; Benndorf, D.; Reichl, U.; Sundmacher, K.: Biological methanation of hydrogen within biogas plants: A model-based feasibility study. Applied Energy 134, pp. 413 - 425 (2014)
Journal Article
Diba, M.; Goudouri, O.-M.; Tapia, F.; Boccaccini, A. R.: Magnesium-containing bioactive polycrystalline silicate-based ceramics and glass-ceramics for biomedical applications. Current Opinion in solid state & materials science 18 (3), pp. 147 - 167 (2014)
Journal Article
Frensing, T.; Pflugmacher, A.; Bachmann, M.; Peschel, B.; Reichl, U.: Impact of defective interfering particles on virus replication and antiviral host response in cell culture-based influenza vaccine production. Applied Microbiology and Biotechnology 98 (21), pp. 8999 - 9008 (2014)
Journal Article
Genzel, Y.; Vogel, T.; Buck, J.; Behrendt, I.; Vazquez-Ramirez, D.; Schiedner, G.; Jordan, I.; Reichl, U.: High cell density cultivations by alternating tangential flow (ATF) perfusion for influenza A virus production using suspension cells. Vaccine 32 (24), pp. 2770 - 2781 (2014)
Journal Article
Huffman, J. E.; Pucic-Bakovic, M.; Klaric, L.; Hennig, R.; Selman, M. H.J.; Vuckovic, F.; Novokmet, M.; Kristic, J.; Borowiak, M.; Muth, T. et al.; Polasek, O.; Razdorov, G.; Gornik, O.; Plomp, R.; Theodorarou, E.; Wright, A. F.; Rudan, I.; Hayward, C.; Campbell, H.; Deelder, A. M.; Reichl, U.; Aulchenko, Y. S.; Rapp, E.; Wuhrer , M.; Lauc , G.: Comparative Performance of Four Methods for High-throughput Glycosylation Analysis of Immunoglobulin G in Genetic and Epidemiological Research. Molecular and Cellular Proteomics 13 (6), pp. 1598 - 1610 (2014)
Journal Article
Kohrs, F.; Heyer, R.; Magnussen, A.; Benndorf, D.; Muth, T.; Behne, A.; Rapp, E.; Kausmann, R.; Heiermann, M.; Klocke, M.: Sample prefractionation with liquid isoelectric focusing enables in depth microbial metaproteome analysis of mesophilic and thermophilic biogas plants. Anaerobe 29, pp. 59 - 67 (2014)
Journal Article
Lohr, V.; Hädicke, O.; Genzel, Y.; Jordan, I.; Buentemeyer, H.; Klamt, S.; Reichl, U.: The avian cell line AGE1.CR.pIX characterized by metabolic flux analysis. BMC Biotechnology 14, p. 72 (2014)
Journal Article
Muth, T.; Weilnböck, L.; Rapp, E.; Huber, C. G.; Martens, L.; Vaudel, M.; Barnsnes, H.: DeNovoGUI: An Open Source Graphical User Interface for de Novo Sequencing of Tandem Mass Spectra. Journal of Proteome Research 13 (2), pp. 1143 - 1146 (2014)
Journal Article
Rath, A.; Rehberg, M.; Janke, R.; Genzel, Y.; Scholz, S.; Noll, T.; Rose, T.; Sandig, V.; Reichl, U.: The influence of cell growth and enzyme activity changes on intracellular metabolite dynamics in AGE1.HN.AAT cells. Journal of Biotechnology 178, pp. 43 - 53 (2014)
Journal Article
Rehberg, M.; Rath, A.; Ritter, J.; Genzel, Y.; Reichl, U.: Changes in intracellular metabolite pools during growth of adherent MDCK cells in two different media. Applied Microbiology and Biotechnology 98 (1), pp. 385 - 397 (2014)
Journal Article
Rehberg, M.; Ritter, J.; Reichl, U.: Glycolysis Is Governed by Growth Regime and Simple Enzyme Regulation in Adherent MDCK Cells. PLoS Computational Biology 10 (10), p. e1003885 (2014)
Journal Article
Rüger, M.; Ackermann, M.; Reichl, U.: Species-specific viability analysis of Pseudomonas aeruginosa, Burkholderia cepacia and Staphylococcus aureus in mixed culture by flow cytometry. BMC Microbiology 14, p. 56 - 56 (2014)
Journal Article
Tapia, F.; Vogel, T.; Genzel, Y.; Behrendt, I.; Hirschel, M.; Gangemi, J. D.; Reichl, U.: Production of high-titer human influenza A virus with adherent and suspension MDCK cells cultured in a single-use hollow fiber bioreactor. Vaccine 32 (8), pp. 1003 - 1011 (2014)
Journal Article
Wang, W.; Wolff, M. W.; Reichl, U.; Sundmacher, K.: Avidity of influenza virus: Model-based identification of adsorption kinetics from surface plasmon resonance experiments. Journal of Chromatography A 1326, pp. 125 - 129 (2014)
Journal Article
Weigel, T.; Solomaier, T.; Peuker, A.; Pathapati, T.; Wolff, M. W.; Reichl, U.: A flow-through chromatography process for influenza A and B virus purification. Journal of Virological Methods 207, pp. 45 - 53 (2014)
Journal Article
York, W.S.; Agravat, S.; Aoki-Kinoshita, K.F.; Mcbride, R.; Campell, F.; Castello, C.E.; Dell, A.; Feizi, T.; Haslam, S.M.; Karlsson, N. et al.; Khoo, K.-H.; Kolarich, D.; Liu, Y.; Novotny, M.; Packer, N.H.; Paulson, J.C.; Rapp, E.; Ranzinger, R.; Rudd, P.M.; Smith, D.F.; Struwe, W.B.; Tiemeyer, M.; Wells, L.; Zaia, J.; Kettner, C.: MIRAGE: The minimum information required for a glycomics experiment. Glycobiology 24 (5), pp. 402 - 406 (2014)

Book (1)

2014
Book
Benner, P.; Findeisen, R.; Flockerzi, D.; Reichl, U.; Sundmacher, K. (Eds.): Large-Scale Networks in Engineering and Life Sciences. Springer International Publishing, Switzerland (2014), 388 pp.

Book Chapter (2)

2014
Book Chapter
Genzel, Y.; Rödig, J.; Rapp, E.; Reichl, U.: Vaccine production: Upstream processing with adherent or suspension cell lines. In: Animal Cell Biotechnology: Methods and Protocols, pp. 371 - 393 (Ed. Pörtner, R.). HUMANA Press Inc., New York (2014)
Book Chapter
Merten, O.-W.; Bakker, W. A.M.; Vorlop, J.; Reiter, M.; Visnovsky, G.; Jäger, V.; Merabishvili, M.; Reichl, U.: Virus Production Under Suspension Conditions. In: Industrial Scale Suspension Culture of Living Cells, pp. 503 - 554. Wiley Blackwell, Weinheim (2014)

Meeting Abstract (5)

2014
Meeting Abstract
Fernandes, P.; Castro, R.; Laske, T.; Genzel, Y.; Kremer, E.; Alves, P.; Coroadinha, A.: The impact of MDCK cell source on the production of influenza and canine adenovirus. In New Biotechnology: Abstracts of the 16th European Congress on Biotechnology, 31 Supplement, p. S180. (2014)
Meeting Abstract
Müller, C.; Hoffmann, D.; Cajic, S.; Hennig, R.; Sgodda, M.; van Diepen, L.; Weissmann, R.; Steinemann, D.; Rapp, E.; Kuss, A. et al.; Cantz, T.; Schambach, A.; Büttner, F.: Functional characterization of PMM2-CDG patient-derived iPSCs. In GLYCOBIOLOGY, (11) 24 Ed., p. 1101 - 1101. (2014)
Meeting Abstract
Müller, C.; Hoffmann, D.; Cajic, S.; Hennig, R.; Sgodda, M.; van Diepen, L.; Weissmann, R.; Steinemann, D.; Rapp, E.; Kuss, A. et al.; Cantz, T.; Schambach, A.; Buettner, F.: Functional characterization of PMM2-CDG patient-derived iPSCs. In Glycobiology, 24 11 Ed., p. 1101 - 1101. Joint Meeting of the Society-for-Glycobiology (SFG) and the Japanese-Society-of-Carbohydrate-Research (JSCR), Honolulu, Hawaii, USA, November 16, 2014 - November 19, 2014. IRL Press at Oxford University Press, Oxford (2014)
Meeting Abstract
Müller, C.; Hoffmann, D.; Cajic, S.; Hennig, R.; Sgodda, M.; van Diepen, L.; Weissmann, R.; Steinemann, D.; Rapp, E.; Kuss, A. et al.; Cantz, T.; Schambach, A.; Buettner, F. F. R.: Molecular characterization of hiPSCs from a PMM2-CDG patient revealed aberrant glycosylation. In Glycobiology, 24 11 Ed., pp. 1176 - 1177. Joint Meeting of the Society-for-Glycobiology (SFG) and the Japanese-Society-of-Carbohydrate-Research (JSCR), Honolulu, Hawaii, USA, November 16, 2014 - November 19, 2014. IRL Press at Oxford University Press, Oxford (2014)
Meeting Abstract
Pucic-Bakovic, M.; Huffman, J. E.; Klaric, L.; Hennig, R.; Selman, M. H. J.; Aulchenko, Y. S.; Rapp, E.; Wuhrer , M.; Lauc, G.: Comparative performance of four methods for high-throughput glycosylation analysis of immunoglobulin G in genetic and epidemiological research. In Glycobiology, 24 11 Ed., p. 1160 - 1160. Joint Meeting of the Society-for-Glycobiology (SFG) and the Japanese-Society-of-Carbohydrate-Research (JSCR), Honolulu, Hawaii, USA, November 16, 2014 - November 19, 2014. IRL Press at Oxford University Press, Oxford (2014)

Talk (15)

2014
Talk
Benndorf, D.: Metaproteomics for process monitoring of anaerobic digesters. 2nd International Conference on Biogas Microbiology, Uppsala, Sweden (2014)
Talk
Benndorf, D.: Metaproteome analysis indicates for the presence of (anaerobic) fungi and bacteriophages in anaerobic digesters. Symposium Novel Anaerobes, Wageningen, The Netherlands (2014)
Talk
Bensmann, B.; Hanke-Rauschenbach, R.; Heyer, R.; Kohrs, F.; Benndorf, D.; Sundmacher, K.: Methanation of renewable hydrogen within biogas reactors? A process systems engineering approac. CHISA 2014, Prague, Czech Republic (2014)
Talk
Fischer, L. M.: Modeling and simulation of the purification of cell culture-derived influenza virus via continuous size exclusion chromatography. SPICA 2014-15th International Symposium on Preparative and Industrial Chromatography and Allied Techniques, Basel, Switzerland (2014)
Talk
Genzel, Y.: Research towards continuous viral vaccine manufacturing. BioTalk-Biological Manufacturing Excellence 2014, Berlin, Germany (2014)
Talk
Genzel, Y.; Reichl, U.: New cell substrates for virus and viral vector production. ISBIOTECH 4th Spring Meeting, Washington, USA (2014)
Talk
Heldt, S.; Frensing, T.; Reichl, U.: The multiscale nature of influenza A virus infection and its implications for modeling antiviral therapy. The Joint Annual Meeting of the Japanese Society for Mathematical Biology and the Society for Mathematical Biology, Osaka, Japan (2014)
Talk
Heyer, R.; Kohrs, F.; Benndorf, D.; Rapp, E.; Reichl, U.: Analysing the microbial population structure and metabolic function by metaproteome analysis. Biogas Science 2014 (International Conference on Anaerobic Digestion), Wien, Austria (2014)
Talk
Hoffmann, M.: Human Blood Plasma O-Glycoproteomics. Bruker Anwendertreffen 2014, Berlin, Germany (2014)
Talk
Laske, T.: Mathematical modeling of virus-host cell interactions during influenza virus replication supports cell line development for vaccine production. Workshop on Virus Dynamics and Evolution des Centre De Recerca Matemàtica (CRM), Bellaterra, Spain (2014)
Talk
Muth, T.; Behne, A.; Heyer, R.; Kohrs, F.; Benndorf, D.; Hoffmann, M.; Reichl, U.; Martens, L.: MetaProteomeAnalyzer – a software suite for the functional and taxonomic characterization of (meta)proteome data. 12th Austrian Proteomic Research Symposium, Salzburg, Austria (2014)
Talk
Rapp, E.; Hennig, R.; Muth, T.; Kottler, R.; Cajic, S.; Reichl, U.: HIGH PERFORMANCE GLYCOANALYSIS TO IMPROVE BIOLOGICS DEVELOPMENT. Cell Culture Engineering XIV (CCE) 2014, Quebec (Canada) (2014)
Talk
Reichl, U.: High-Throughput Glycoanalysis for Characterization of Proteins and Sugars in Research and Industry. Sitzung der Technikwissenschaftlichen Klasse an der Sächsischen Akademie der Wissenschaften zu Leipzig, Leipzig, Germany (2014)
Talk
Serve, A.; Kluge, S.: Probenvorbereitung zur qualitativen Protein- und Lipidanalytik: Anwendung in der Inprozess-Kontrolle der Virusproduktion. 21. Arbeitstagung "Mikromethoden in der Proteinchemie", Dortmund, Germany (2014)
Talk
Wolff, M. W.; Fortuna, A. R.; Pieler, M.; Weigel, T.; Fischer, L. M.; Reichl, U.: Upcoming chromatography media for cell culture-derived influenza virus purification. ProcessNetJahrestagung und Jahrestagung der Biotechnologen 2014 , Aachen, Germany (2014)

Poster (32)

2014
Poster
Bachmann, M.; Frensing, T.; Sandig, V.; Reichl, U.: Expression of adenoviral early-region E1A protein benefits cell culture-based influenza vaccine production. 4th International Influenza Meeting, Münster, Germany (2014)
Poster
Bensmann, A.; Hanke-Rauschenbach, R.; Heyer, R.; Kohrs, F.; Benndorf, D.; Reichl, U.; Sundmacher, K.: Methanisierung von erneuerbarem Wasserstoff in Biogas-Anlagen,. ProcessNet-Anual Meeting, Aachen, Germany (2014)
Poster
Cajic, S.; Müller, C.; Hennig, R.; Hoffmann, D.; Schambach, A.; Reichl, U.; Buettner, F. F.R.; Rapp, E.: The sweet beginning–N-glycosylation of induced pluripotent stem cells from a PMM2-CDG patient. 25th Joint Glycobiology Meeting, Ghent, Belgium (2014)
Poster
Fernandes, P.; Castro, R.; Laske, T.; Genzel, Y.; Kremer, E.J.; Alves, P.M.; Coroadinha, A.S.: The impact of MDCK cell source on the production of Influenza and Canine Adenovirus. ECB16 - 16th European Congress on Biotechnology, Edinburgh, Scotland (2014)
Poster
Fortuna, A. R.; Pieler, M.; Hundt, B.; Villain, L.; Wolff, M. W.; Reichl, U.: Membrane supports for influenza virus purification. ISPPP 2014 - 34th International Symposium on the Separation of Proteins, Peptides and Polynucleotides, Fortress Marienberg, Würzburg, Germany (2014)
Poster
Fortuna, A. R.; Pieler, M.; Hundt, B.; Villain, L.; Wolff, M. W.; Reichl, U.: Membrane supports for influenza virus purification. ProcessNet-Jahrestagung und 31. DECHEMA-Jahrestagung der Biotechnologen 2014, Aachen, Germany (2014)
Poster
Frensing, T.; Heldt, S.; Bachmann, M.; Genzel, Y.; Jordan, I.; Reichl, U.: CONTINUOUS INFLUENZA VACCINE PRODUCTION. Vaccine Technology 2014, Playa del Carmen, Mexico (2014)
Poster
Frensing, T.; Heldt, S.; Bachmann, M.; Genzel, Y.; Jordan, I.; Reichl, U.: Continuous influenza vaccine production. ProcessNet-Jahrestagung und 31. DECHEMA-Jahrestagung der Biotechnologen 2014, Aachen, Germany (2014)
Poster
Genzel, Y.; Tapia, F.; Vogel, T.; Vazquez-Ramirez, D.; Behrendt, I.; Jordan , I.; Sandig, V.; Hirschel, M.; Gangemi, J.D.; Reichl, U.: Disposable hollow fiber bioreactors for high cell density virus production in continuous mode. Vaccine Technology 2014, Playa del Carmen, Mexico (2014)
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