Journal Article (129)

2021
Journal Article
Sarna, N.: A Positive and Stable L2-minimization Based Moment Method for the Boltzmann Equation of Gas dynamics. Journal of Computational Physics 440, 110428, 26 pages (2021)
Journal Article
Sarna, N.; Benner, P.: Data-Driven Model Order Reduction for Problems with Parameter-Dependent Jump-Discontinuities. Computer Methods in Applied Mechanics and Engineering 387, 114168, 30 pages (2021)
Journal Article
Schneider, P.; Radhakrishnan, M.; Klamt, S.: Systematizing the different notions of growth-coupled product synthesis and a single framework for computing corresponding strain designs. Biotechnology Journal 16, 2100236 (2021)
Journal Article
Schulze-Niemand, E.; Naumann, M.; Stein, M.: The Activation and Selectivity of the Legionella RavD Deubiquitinase. Frontiers in Molecular Biosciences 8, 770320 (2021)
Journal Article
Seidel, C.; Nikolic, D.; Felischak, M.; Petkovska, M.; Seidel-Morgenstern, A.; Kienle, A.: Optimization of Methanol Synthesis under Forced Periodic Operation. Processes 9 (5), 872 (2021)
Journal Article
Shetty, S. C.; Yandrapalli, N.; Pinkwart, K.; Krafft, D.; Vidaković-Koch, T.; Ivanov, I.; Robinson, T.: Directed Signaling Cascades in Monodisperse Artificial Eukaryotic Cells. ACS Nano 15 (10), pp. 15656 - 15666 (2021)
Journal Article
Shi, H.; Zhang, X.; Sundmacher, K.; Zhou, T.: Model-Based Optimal Design of Phase Change Ionic Liquids for Efficient Thermal Energy Storage. Green Energy & Environment 6 (3), pp. 392 - 404 (2021)
Journal Article
Shi, H.; Zhou, T.: Computational design of heterogeneous catalysts and gas separation materials for advanced chemical processing. Frontiers of Chemical Science and Engineering 15, pp. 49 - 59 (2021)
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Sivakumar, D.; Stein, M.: Binding of SARS-CoV Covalent Non-Covalent Inhibitors to the SARS-CoV-2 Papain-Like Protease and Ovarian Tumor Domain Deubiquitinases. Biomolecules 11, 802 (2021)
Journal Article
Song, Z.; Wang, J.; Sundmacher, K.: Evaluation of COSMO-RS for solid-liquid equilibria prediction of binary eutectic solvent systems. Green Energy & Environment 6 (3), pp. 371 - 379 (2021)
Journal Article
Staufer, O.; De Lora, J. A.; Bailoni, E.; Bazrafshan, A.; Benk, A. S.; Jahnke, K.; Manzer, Z. A.; Otrin, L.; Díez Pérez, T.; Sharon, J. et al.; Steinkühler, J.; Adamala, K. P.; Jacobson, B.; Dogterom, M.; Göpfrich, K.; Stefanovic, D.; Atlas, S. R.; Grunze, M.; Lakin, M. R.; Shreve, A. P.; Spatz, J. P.; López, G. P.: Building a community to engineer synthetic cells and organelles from the bottom-up. eLife 10, e73556 (2021)
Journal Article
Stoll, A.; Benner, P.: Machine Learning for Material Characterization with an Application for Predicting Mechanical Properties. GAMM-Mitteilungen: Special Issue: Scientific Machine Learning - Part I 44 (1), e202100003, 21 pages (2021)
Journal Article
Stracy, M.; Schweizer, J.; Sherratt, D. J.; Kapanidis, A. N.; Uphoff, S.; Lesterlin, C.: Transient non-specific DNA binding dominates the target search of bacterial DNA-binding proteins. Molecular Cell 81 (7), pp. 1499 - 1514 (2021)
Journal Article
Triemer, S.; Schulze, M.; Wriedt, B.; Schenkendorf, R.; Ziegenbalg, D.; Krewer, U.; Seidel-Morgenstern, A.: Kinetic analysis of the partial synthesis of artemisinin: Photooxygenation to the intermediate hydroperoxide. Journal of Flow Chemistry 11, pp. 641 - 659 (2021)
Journal Article
Uebbing, J.; Biegler, L. T.; Rihko-Struckmann, L.; Sager, S.; Sundmacher, K.: Optimization of Pressure Swing Adsorption via a Trust-Region Filter Algorithm and Equilibrium Theory. Computers & Chemical Engineering 151, 107340 (2021)
Journal Article
Van Den Bossche, T.; Arntzen, M. Ø.; Becher, D.; Benndorf, D.; Eijsink, V. G. H.; Henry, C.; Jagtap, P. D.; Jehmlich, N.; Juste, C.; Kunath, B. J. et al.; Mesuere, B.; Muth, T.; Pope, P. B.; Seifert, J.; Tanca, A.; Uzzau, S.; Wilmes, P.; Hettich, R. L.; Armengaud, J.: The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes. Microbiome 9 (1), 243 (2021)
Journal Article
Van Den Bossche, T.; Kunath, B. J.; Schallert, K.; Schäpe, S. S.; Abraham, P. E.; Armengaud, J.; Arntzen, M. Ø.; Bassignani, A.; Benndorf, D.; Fuchs, S. et al.; Giannone, R. J.; Griffin, T. J.; Hagen, L. H.; Halder, R.; Henry, C.; Hettich, R. L.; Heyer, R.; Jagtap, P.; Jehmlich, N.; Jensen, M.; Juste, C.; Kleiner, M.; Langella, O.; Lehmann, T.; Leith, E.; May, P.; Mesuere, B.; Miotello, G.; Peters, S. L.; Pible, O.; Reichl, U.; Renard, B. Y.; Schiebenhoefer, H.; Scryba, A.; Tanca, A.; Trappe, K.; Trezzi, J.-P.; Uzzau, S.; Verschaffelt, P.; von Bergen, M.; Wilmes, P.; Wolf, M.; Martens, L.; Muth, T.: Critical Assessment of Metaproteome Investigation (CAMPI): A Multi-Lab Comparison of Established Workflows. Nature Communications 12 (1), 7305 (2021)
Journal Article
Vidaković-Koch, T.; Miličić, T.; Živković, L. A.; Chan, H. S.; Krewer, U.; Petkovska, M.: Nonlinear frequency response analysis: a recent review and perspectives. Current Opinion in Electrochemistry 30, 100851 (2021)
Journal Article
Walke, D.; Schallert, K.; Ramesh, P.; Benndorf, D.; Lange, E.; Reichl, U.; Heyer, R.: MPA_Pathway_Tool: User-Friendly, Automatic Assignment of Microbial Community Data on Metabolic Pathways. International Journal of Molecular Sciences 22 (20), 10992 (2021)
Journal Article
Walter, J. P.; Brune, A.; Seidel-Morgenstern, A.; Hamel, C.: Model‐based Analysis of Fixed‐bed and Membrane Reactors of Various Scale. Chemie Ingenieur Technik 93 (5), pp. 819 - 824 (2021)
Journal Article
Walter, J. P.; Brune, A.; Seidel-Morgenstern, A.; Hamel, C.: Process Intensification of the Propane Dehydrogenation Considering Coke Formation, Catalyst Deactivation and Regeneration—Transient Modelling and Analysis of a Heat-Integrated Membrane Reactor. Catalysts 11, 1056 (2021)
Journal Article
Wang, M.; Weber, A.; Hartig, R.; Zheng, Y.; Krafft, D.; Vidaković-Koch, T.; Zuschratter, W.; Ivanov, I.; Sundmacher, K.: Scale up of Transmembrane NADH Oxidation in Synthetic Giant Vesicles. Bioconjugate Chemistry 32 (5), pp. 897 - 903 (2021)
Journal Article
Wang, Z.; Song, Z.; Zhou, T.: Machine Learning for Ionic Liquid Toxicity Prediction. Processes 9 (1), 65 (2021)
Journal Article
Wohlfromm, F.; Richter, M.; Otrin, L.; Seyrek, K.; Vidaković-Koch, T.; Kuligina, E.; Richter, V.; Koval, O.; Lavrik, I. N.: Interplay Between Mitophagy and Apoptosis Defines a Cell Fate Upon Co-treatment of Breast Cancer Cells With a Recombinant Fragment of Human κ-Casein and Tumor Necrosis Factor-Related Apoptosis-Inducing Ligand. Frontiers in Cell and Developmental Biology 8, 617762 (2021)
Journal Article
Wünsche, S.; Yuan, L.; Seidel-Morgenstern, A.; Lorenz, H.: A Contribution to the Solid State Forms of Bis(demethoxy)curcumin: Co-Crystal Screening and Characterization. Molecules 26, 720 (2021)
Journal Article
Yıldız, S.; Goyal, P. K.; Benner, P.; Karasözen, B.: Learning Reduced-order Dynamics for Parametrized Shallow Water Equations from Data. International Journal for Numerical Methods in Fluids 93 (8), pp. 2803 - 2821 (2021)
Journal Article
Zafar, S.; Perveen, S.; Cheema, A.; Qamar, S.: Analysis of temperature variations in fixed-bed columns using non-isothermal and non-equilibrium transport model. Thermal Science 25 (5 Part B), pp. 3857 - 3871 (2021)
Journal Article
Zhang, X.; Ding, X.; Song, Z.; Zhou, T.; Sundmacher, K.: Integrated Ionic Liquid and Rate‐Based Absorption Process Design for Gas Separation: Global Optimization Using Hybrid Models. AIChE Journal 67 (10), 17340 (2021)
Journal Article
Zhou, T.; Gani, R.; Sundmacher, K.: Hybrid data-driven and mechanistic modeling approaches for multiscale material and process design. Engineering 7 (9), pp. 1231 - 1238 (2021)

Book (4)

2021
Book
Benner, P.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G.; Schilders, W.; Silveira, L. M. (Eds.): Model Order Reduction: Volume I: System- and Data-Driven Methods and Algorithms. De Gruyter, Berlin, Boston (2021)
Book
Benner, P.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G.; Schilders, W.; Silveira, L. M. (Eds.): Model Order Reduction - Volume 2: Snapshot-Based Methods and Algorithms. De Gruyter, Berlin, Boston (2021)
Book
Benner, P.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G.; Schilders, W.; Silveira, L. M. (Eds.): Model Order Reduction: Volume 3: Applications. De Gruyter, Berlin, Boston (2021)
Book
Lorenz, H.; Temmel, E. (Eds.): Advances in Industrial Crystallization. MDPI, Basel, Switzerland (2021), 258 pp.

Book Chapter (20)

2021
Book Chapter
Benner, P.; Feng, L.: Model Order Reduction based on Moment-Matching. In: Model Order Reduction: Volume 1: System- and Data-Driven Methods and Algorithms, pp. 57 - 96 (Eds. Benner, P.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G.; Schilders, W. et al.). De Gruyter, Berlin, Boston (2021)
Book Chapter
Benner, P.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G.; Schilders, W.; Silveira, L. M.: Model Order Reduction: Basic Concepts and Notation. In: Model Order Reduction: Volume 1: System- and Data-Driven Methods and Algorithms, pp. 1 - 14 (Eds. Benner, P.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G.; Schilders, W. et al.). De Gruyter, Berlin, Boston (2021)
Book Chapter
Benner, P.; Köhler, M.; Saak, J.: Matrix Equations, Sparse Solvers: M-M.E.S.S.-2.0.1 -- Philosophy, Features and Application for (Parametric) Model Order Reduction. In: Model Reduction of Complex Dynamical Systems, pp. 369 - 392 (Eds. Benner, P.; Breiten, T.; Faßbender, H.; Hinze, M.; Stykel, T. et al.). Birkhäuser, Cham (2021)
Book Chapter
Benner, P.; Seidel-Morgenstern, A.; Zuyev, A.: Analysis of Switching Strategies for the Optimization of Periodic Chemical Reactions with Controlled Flow-Rate: DSTA, Łódź, Poland December 2–5, 2019. In: Perspectives in Dynamical Systems III: Control and Stability, pp. 59 - 69 (Ed. Awrejcewicz, J.). Springer International Publishing, Switzerland (2021)
Book Chapter
Benner, P.; Werner, S. W. R.: MORLAB – The Model Order Reduction LABoratory. In: Model Reduction of Complex Dynamical Systems, pp. 393 - 415 (Eds. Benner, P.; Breiten, T.; Faßbender, H.; Hinze, M.; Stykel, T. et al.). Birkhäuser, Cham, Switzerland (2021)
Book Chapter
Cajic, S.; Hennig, R.; Burock, R.; Rapp, E.: Capillary (Gel) Electrophoresis-Based Methods for Immunoglobulin (G) Glycosylation Analysis. In: Antibody Glycosylation, pp. 137 - 172 (Ed. Pezer, M.). Springer, Cham, Switzerland (2021)
Book Chapter
Chellappa, S.; Feng, L.; de la Rubia, V.; Benner, P.: Adaptive Interpolatory MOR by Learning the Error Estimator in the Parameter Domain. In: Model Reduction of Complex Dynamical Systems, pp. 97 - 117 (Eds. Benner, P.; Breiten, T.; Faßbender, H.; Hinze, M.; Stykel, T. et al.). Birkhäuser, Cham (2021)
Book Chapter
Gosea, I. V.; Pontes Duff, I.: Toward Fitting Structured Nonlinear Systems by Means of Dynamic Mode Decomposition. In: Model Reduction of Complex Dynamical Systems, pp. 53 - 74 (Eds. Benner, P.; Breiten , T.; Faßbender, H.; Hinze, M.; Stykel, T. et al.). Birkhäuser, Cham, Switzerland (2021)
Book Chapter
Gräßle, C.; Hinze, M.; Volkwein, S.: Model Order Reduction by Proper Orthogonal Decomposition. In: Model Order Reduction: Volume 2: Snapshot-Based Methods and Algorithms, pp. 47 - 96 (Eds. Benner, P.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G.; Schilders, W. et al.). De Gruyter (2021)
Book Chapter
Henning, J.; Palitta, D.; Simoncini, V.; Urban, K.: Matrix Oriented Reduction of Space-Time Petrov-Galerkin Variational Problems. In: Numerical Mathematics and Advanced Applications ENUMATH 2019: European Conference, Egmond aan Zee, The Netherlands, September 30 - October 4, pp. 1049 - 1057 (Eds. Vermolen, F. J.; Vuik, C.). Springer, Cham, Switzerland (2021)
Book Chapter
Himpe, C.: Comparing (Empirical-Gramian-Based) Model Order Reduction Algorithms. In: Model Reduction of Complex Dynamical Systems, pp. 141 - 164 (Eds. Benner, P.; Breiten , T.; Faßbender, H.; Hinze, M.; Stykel, T. et al.). Birkhäuser, Cham, Switzerland (2021)
Book Chapter
Horosanskaia, E.; Yuan, L.; Seidel-Morgenstern, A.; Lorenz, H.: Purification of Curcumin from Ternary Extract-Similar Mixtures of Curcuminoids in a Single Crystallization Step. In: Advances in Industrial Crystallization, pp. 53 - 68 (Eds. Temmel, E.; Lorenz, H.). MDPI, Basel, Switzerland (2021)
Book Chapter
Karachalios, D.; Gosea, I. V.; Antoulas, A. C.: The Loewner Framework for System Identification and Reduction. In: Model Order Reduction: Volume I: System- and Data-Driven Methods and Algorithms, pp. 181 - 228 (Eds. Benner, P.; Schilders, W.; Grivet-Talocia, S.; Quarteroni, A.; Rozza, G. et al.). De Gruyter, Berlin, Boston (2021)
Book Chapter
Karachalios, D.; Gosea, I. V.; Antoulas, A. C.: On Bilinear Time Domain Identification and Reduction in the Loewner Framework. In: Model Reduction of Complex Dynamical Systems, pp. 3 - 30 (Eds. Benner, P.; Breiten, T.; Faßbender, H.; Hinze, M.; Stykel, T. et al.). Birkhäuser, Cham, Switzerland (2021)
Book Chapter
Kotelnikova, E.; Sadovnichii, R.; Kryuchkova, L.; Lorenz, H.: Limits of Solid Solutions and Thermal Deformations in the L-Alanine–L-Serine Amino Acid System. In: Advances in Industrial Crystallization, pp. 5 - 18 (Ed. Temmel, E.). MDPI, Basel, Switzerland (2021)
Book Chapter
Osmanbegovic, N.; Yuan, L.; Lorenz, H.; Louhi-Kultanen, M.: Freeze Concentration of Aqueous [DBNH][OAc] Ionic Liquid Solution. In: Advances in Industrial Crystallization, pp. 69 - 82 (Ed. Temmel, E.). MDPI, Basel, Switzerland (2021)
Book Chapter
Rave, S.; Saak, J.: A Non-Stationary Thermal-Block Benchmark Model for Parametric Model Order Reduction. In: Model Reduction of Complex Dynamical Systems, pp. 349 - 356 (Eds. Benner, P.; Breiten, T.; Faßbender, H.; Hinze, M.; Stykel, T. et al.). Birkhäuser, Cham, Switzerland (2021)
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