Conradi, C.; Saez-Rodriguez, J.; Gilles, E. D.; Raisch, J.: Chemical Reaction Network Theory: a tool for systems biology. In: 5th MATHMOD: Full Paper CD, p. SP22_267_P. 5th MATHMOD, Vienna, Austria, February 08, 2006 - February 10, 2006. (2006)

Krasnyk, M.; Bondareva, K.; Milokhov, O.; Teplinskiy, K.; Ginkel, M.; Kienle, A.: The ProMoT/Diana Simulation Environment. In: 16th European Symposium on Computer Aided Process Engineering and 9th International Symposium on Process Systems Engineering, pp. 445 - 450 (Eds. Marquardt, M.; Pantelides, C.). 16th European Symposium on Computer Aided Process Engineering and 9th International Symposium on Process Systems Engineering, Garmisch-Partenkirchen, Germany, July 09, 2006 - July 13, 2006. Elsevier, Amsterdam (2006)

Backfisch, T.; Pruteanu, M.; Hengge, R.; Gilles, E. D.: Mathematical Model of rpoS Regulation in E. coli. In: Foundations of Systems Biology in Engineering, FOSBE 2005, pp. 239 - 242. FOSBE 2005 (Foundations of Systems Biology in Engineering), Santa Barbara, USA, August 07, 2005 - August 10, 2005. (2005)

Conradi, C.; Saez-Rodriguez, J.; Gilles, E. D.; Raisch, J.: Using chemical reaction network theory to discard a kinetic mechanism hypothesis. In: Foundations of Systems Biology in Engineering, FOSBE 2005, pp. 325 - 328. Foundations of Systems Biology in Engineering, Santa Barbara, August 07, 2005 - August 10, 2005. (2005)

Krasnyk, M.; Ginkel, M.; Mangold, M.; Kienle, A.: Numerical Analysis of Higher-Order Singularities in Complex Chemical Process Models in ProMoT. In: European Symposium on Computer Aided Process Engineering - 15, pp. 223 - 228 (Eds. Puigjaner, L.; Espuña, A.). 15th European Symposium on Computer Aided Process Engineering , Barcelona, Spain, May 29, 2005 - June 01, 2005. Elsevier, Amsterdam (2005)

Saez-Rodriguez, J.; Conzelmann, H.; Sauter, T.; Kholodenko, B. N.; Gilles, E. D.: Domain-oriented and modular approaches to the reduction of mathematical models of signaling networks. In: 4th Workshop on Computation of Biochemical Pathways and Genetic Networks: a BioSim Event, pp. 13 - 20 (Eds. Kummer, U.; Pahle, J.; Surovtsova, I.; Zobeley, J.). 4th Workshop on Computation of Biochemical Pathways and Genetic Networks, Heidelberg, Germany, September 12, 2005 - September 13, 2005. (2005)

Grüner, S.; Schwarzkopf, S.; Disli-Uslu, I.; Kienle, A.; Gilles, E. D.: Nonlinear model predictive control of multicomponent distillation columns using wave models. In: Preprints / ADCHEM 2004: 7th International Symposium on Advanced Control of Chemical Processes, pp. 231 - 236. ADCHEM 2004, Hong Kong, China, January 11, 2004 - January 14, 2004. (2004)

Nutsch, T.; Marwan, W.; Oesterhelt, D.; Gilles, E. D.: A coherent kinetic model of sensing and response in halobacterium salinarium phototaxis based on the mechanism of flagellar motor switching. In: Bioinformatics of genome regulation and structure, pp. 113 - 116. The Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004), Novosibirsk, Russia, July 25, 2004 - July 30, 2004. (2004)

Chebotarov, M.; Ginkel, M.; Häfele, M.; Mangold, M.; Gilles, E. D.; Kienle, A.; Svjatnyj, V.: DIVAGUI: the graphical user interface for the simulation environment DIVA. In: Simulationstechnik: 17. Symposium in Magdeburg, pp. 155 - 160 (Ed. Hohmann, R.). ASIM 2003 : 17. Symposium Simulationstechnik, Magdeburg, Germany, May 16, 2003 - May 19, 2003. (2003)

Kremling, A.; Bettenbrock, K.; Fischer, S.; Ginkel, M.; Sauter, T.; Gilles, E. D.: Towards whole cell in silico models for cellular systems: model set-up and model validation. In: Positive systems: proceedings of the First Multidisciplinary International Symposium on Positive Systems (POST 2003), pp. 92 - 102 (Eds. Benvenuti, L.; de Santis, A.; Farina, L.). First Multidisciplinary International Symposium on Positive Systems (POST 2003), Rome, Italy, August 28, 2003 - August 30, 2003. (2003)

Mangold, M.; Ginkel, M.; Gilles, E. D.: Entwicklung einer Bibliothek dynamischer Membranreaktormodelle mit Hilfe des Modellierungswerkzeugs ProMoT. In: Simulationstechnik: 17. Symposium in Magdeburg, pp. 161 - 166 (Ed. Hohmann, R.). ASIM 2003 - 17. Symposium Simulationstechnik, Magdeburg, Germany, September 16, 2003 - September 19, 2003. (2003)

Mangold, M.; Ginkel, M.; Gilles, E. D.: A dynamic model library for membrane reactors. In: ECCE - 4th European Congress of Chemical Engineering, p. P-6.1-033. ECCE - 4th European Congress of Chemical Engineering, Granada, Spain, September 21, 2003 - September 25, 2003. (2003)

Waschler, R.; Angeles-Palacios, O.; Ginkel, M.; Kienle, A.: Flexible Modellierung grosschemischer Anlagen mit dem Modellierungswerkzeug ProMoT. In: Simulationstechnik: 17. Symposium in Magdeburg, pp. 173 - 178 (Ed. Hohmann, R.). 17. Symposium Simulationstechnik : ASIM 2003, Magdeburg, Germany, May 16, 2003 - May 19, 2003. (2003)

Waschler, R.; Angeles-Palacios, O.; Ginkel, M.; Kienle, A.: Application of the Process Modeling Tool ProMoT to large-scale chemical engineering processes. In: Proceedings / 4rd MATHMOD, pp. 1113 - 1121. 4th IMACS Symposium on Mathematical Modelling, Vienna, Austria, February 05, 2003 - February 07, 2003. (2003)

Mangold, M.; Mohl, K. D.; Grüner, S.; Kienle, A.; Gilles, E. D.: Nonlinear Analysis of gPROMS Models Using DIVA as via a CAPE ESO interface. In: European Symposium on Computer Aided Process Engineering - 12, pp. 919 - 924 (Eds. Grievink, J.; van Schijndel, J.). ESCAPE-12 and 35th European Symposium of the Working Party on Computer Aided Process Engineering, The Hague, the Netherlands, May 26, 2002 - May 29, 2002. (2002)

Sauter, T.; Kremling, A.; Bettenbrock, K.; Fischer, S.; Gilles, E. D.: Analysis of the dynamics of the Escherichia coli glucose PTS in different time windows. In: Abstracting and synthesizing the principles of living systems: Fifth German Workshop on Artificial Life, pp. 33 - 42 (Eds. Polani, D.; Kim, J.; Martinetz, T.). Fifth German Workshop on Artificial Life, Luebeck, Germany, March 18, 2002 - March 20, 2002. (2002)

Conradi, C.; Stelling, J.; Raisch, J.: Structure discrimination of continuous models for biochemical reaction networks via finite state machines. In: Proceedings of the 2001 IEEE International Symposium on Intelligent Control ISIC'01, pp. 138 - 143. (2001)

Fernholz, G.; Friedrich, M.; Grüner, S.; Mohl, K. D.; Kienle, A.; Gilles, E. D.: Linear mimo controller design for an industrial reactive distillation column. IFAC Symposium on Dynamics and Control of Process Systems; 6th, Jejudo Island, Korea, June 04, 2001 - June 06, 2001. IFAC Proceedings Volumes 34 (25), pp. 125 - 130 (2001)

Grüner, S.; Mohl, K. D.; Kienle, A.; Gilles, E. D.; Fernholz, G.: Nonlinear control of an industrial reactive distillation column. In: Dynamics and control of process systems 2001, pp. 125 - 130 (Eds. Stephanopoulos, G.; Lee, J.H.; Joon, E.S.). IFAC Symposium on Dynamics and Control of Process Systems; 6th, Jejudo Island, Korea, June 04, 2001 - June 06, 2001. (2001)

Klamt, S.; Kremling, A.; Gilles, E. D.: FluxAnalyzer: a graphical user interface for stoichiometric and quantitative analysis of metabolic networks. 8th IFAC Internationall Conference on Computer Applications in Biotechnology, Québec, June 24, 2001 - June 27, 2001. IFAC Proceedings Volumes, pp. 119 - 124 (2001)