Publications of Systems Biology (SBI)

Anders, A.; Lilie, H.; Franke, K.; Kapp, L.; Stelling, J.; Gilles, E. D.; Breunig, K. D.: The galactose switch in Kluyveromyces lactis depends on nuclear competition between Gal4 and Gal1 for Gal80 binding. The Journal of Biological Chemistry 281 (39), pp. 29337 - 29348 (2006)

Antoniukas, L.; Grammel, H.; Reichl, U.: Production of hantavirus Puumala nucleocapsid protein in Saccharomyces cerevisiae for vaccine and diagnostics. Journal of Biotechnology 124 (2), pp. 347 - 362 (2006)

Bettenbrock, K.; Fischer, S.; Kremling, A.; Jahreis, K.; Sauter, T.; Gilles, E. D.: A quantitative approach to catabolite repression in Escherichia coli. Journal of Biological Chemistry 281, pp. 2578 - 2584 (2006)

Conzelmann, H.; Saez-Rodriguez, J.; Sauter, T.; Kholodenko, B. N.; Gilles, E. D.: A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks. BMC Bioinformatics 7, 34 (2006)

Gilles, E. D.: Signal transduction and regulation in bacteria. Computers and Chemical Engineering 30 (10-12 ), pp. 1687 - 1699 (2006)

Joshi, M.; Kremling, A.; Seidel-Morgenstern, A.: Model based statistical analysis of adsorption equilibrium data. Chemical Engineering Science 61 (23), pp. 7805 - 7818 (2006)

Joshi, M.; Seidel-Morgenstern, A.; Kremling, A.: Exploiting the bootstrap method for quantifying parameter confidence intervals in dynamical systems. Metabolic Engineering 8 (5), pp. 447 - 455 (2006)

Klamt, S.: Generalized concept of minimal cut sets in biochmical networks. Biosystems 83 (2-3 ), pp. 233 - 247 (2006)

Klamt, S.; Saez-Rodriguez, J.; Lindquist, J.; Simeoni, L.; Gilles, E. D.: A methodology for the structural and functional analysis of signaling and regulatory networks. BMC Bioinformatics 7, p. 56 (2006)

Saez-Rodriguez, J.; Mirschel, S.; Hemenway, R.; Klamt, S.; Gilles, E. D.; Ginkel, M.: Visual set-up of logical models of signaling and regulatory networks with ProMoT. BMC Bioinformatics 7, 506 (2006)

Straube, R.; Flockerzi, D.; Hauser, M. J. B.: Sub-Hopf/fold-cycle bursting and its relation to (quasi-)periodic oscillations. Journal of Physics: Conference Series 55 , pp. 214 - 231 (2006)

Waschler, R.; Angeles-Palacios, O.; Ginkel, M.; Kienle, A.: Object-oriented modelling of large scale chemical engineering processes with ProMoT. Mathematical and Computer Modelling of Dynamical Systems 12 (1), pp. 5 - 18 (2006)

Conradi, C.; Saez-Rodriguez, J.; Gilles, E. D.; Raisch, J.: Chemical Reaction Network Theory: a tool for systems biology. In: 5th MATHMOD: Full Paper CD, p. SP22_267_P. 5th MATHMOD, Vienna, Austria, February 08, 2006 - February 10, 2006. (2006)

Krasnyk, M.; Bondareva, K.; Milokhov, O.; Teplinskiy, K.; Ginkel, M.; Kienle, A.: The ProMoT/Diana Simulation Environment. In: 16th European Symposium on Computer Aided Process Engineering and 9th International Symposium on Process Systems Engineering, pp. 445 - 450 (Eds. Marquardt, M.; Pantelides, C.). 16th European Symposium on Computer Aided Process Engineering and 9th International Symposium on Process Systems Engineering, Garmisch-Partenkirchen, Germany, July 09, 2006 - July 13, 2006. Elsevier, Amsterdam (2006)

Joshi, M.; Kremling, A.; Seidel-Morgenstern, A.: Statistische Analyse von Adsorptionsgleichgewichten. In Chemie-Ingenieur-Technik, 78 (9), p. 1290. GVC/DECHEMA-Jahrestagungen 2006, Wiesbaden, Germany, September 26, 2006 - September 28, 2006. Wiley-VCH, Weinheim, Germany (2006)